View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10730_8 (Length: 383)
Name: NF10730_8
Description: NF10730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10730_8 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 25 - 337
Target Start/End: Complemental strand, 34970915 - 34970602
Alignment:
| Q |
25 |
caaaaacatcatgataaaagttttaaaagtcaaaatttatagttgcttaaaagaaactcaaaagtaccaattatattatattatcatatatcatcgtatt |
124 |
Q |
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| T |
34970915 |
caaaaacatcatgataaaagttttaaaagtcaaaatttatagttggttaaaagaaactcaaaagtaccaattatattatattataatatatcatcgtatt |
34970816 |
T |
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| Q |
125 |
aatatacaagagaaa-ccacaaatttcaaccataatacaatcatgagctaaaatagagtttcacaaatgttgtacgcgtaaccggtacgagtacaatcat |
223 |
Q |
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| T |
34970815 |
aatatacaagagaaagccacaaatttcaaccataatacaatcatgagctaaaatagagtttcacaaatgttgtacgcgtaaccgatacgagtacaatcat |
34970716 |
T |
|
| Q |
224 |
aagttaaaatagttcgcaaaattggcatttaagagaattaaatatgagaccttgcgagaagcactccaaggtctcaaatcaatacgactaaacaaattca |
323 |
Q |
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|||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||| ||||| |||||||| || |||||| || |
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| T |
34970715 |
aagttaaaatagttcgcaaaattgacatttaagagaatcaaatatgagaccttgtgagaagcacttcaaggtttcaaaccaatacgattagacaaatcca |
34970616 |
T |
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| Q |
324 |
agtgggttaatcat |
337 |
Q |
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|||||||||||||| |
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| T |
34970615 |
agtgggttaatcat |
34970602 |
T |
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