View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10731_high_4 (Length: 290)

Name: NF10731_high_4
Description: NF10731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10731_high_4
NF10731_high_4
[»] chr8 (10 HSPs)
chr8 (1-277)||(31734310-31734585)
chr8 (5-126)||(22573133-22573254)
chr8 (5-109)||(32889949-32890053)
chr8 (1-121)||(9028635-9028755)
chr8 (5-124)||(39283705-39283824)
chr8 (14-121)||(556786-556895)
chr8 (5-109)||(40028820-40028924)
chr8 (7-109)||(7547857-7547959)
chr8 (26-109)||(11066502-11066585)
chr8 (12-109)||(38503855-38503951)
[»] chr4 (13 HSPs)
chr4 (4-126)||(45413766-45413888)
chr4 (12-123)||(2183300-2183411)
chr4 (5-123)||(26635260-26635378)
chr4 (1-126)||(34666399-34666528)
chr4 (12-125)||(36625533-36625646)
chr4 (5-121)||(55945653-55945769)
chr4 (7-108)||(42964462-42964561)
chr4 (13-114)||(19181421-19181522)
chr4 (11-120)||(33451327-33451436)
chr4 (16-121)||(44126013-44126118)
chr4 (12-126)||(43481302-43481414)
chr4 (75-121)||(35320693-35320739)
chr4 (6-121)||(22202925-22203040)
[»] chr1 (18 HSPs)
chr1 (4-207)||(6768259-6768466)
chr1 (4-126)||(26793754-26793876)
chr1 (7-126)||(9383223-9383342)
chr1 (21-120)||(19806758-19806857)
chr1 (14-128)||(4076340-4076454)
chr1 (14-109)||(50004909-50005004)
chr1 (14-109)||(4950198-4950292)
chr1 (38-126)||(42471969-42472057)
chr1 (13-120)||(49236173-49236280)
chr1 (5-109)||(45792691-45792794)
chr1 (21-116)||(7904161-7904256)
chr1 (21-116)||(8002685-8002780)
chr1 (7-53)||(42472062-42472108)
chr1 (75-121)||(49288051-49288097)
chr1 (76-117)||(7902048-7902089)
chr1 (76-117)||(7905498-7905539)
chr1 (8-53)||(20018611-20018656)
chr1 (16-60)||(49288006-49288050)
[»] chr2 (8 HSPs)
chr2 (4-126)||(6457595-6457717)
chr2 (4-126)||(40626466-40626588)
chr2 (13-126)||(40054459-40054572)
chr2 (15-125)||(6452471-6452581)
chr2 (12-109)||(18665165-18665262)
chr2 (9-109)||(5256379-5256479)
chr2 (15-109)||(7670385-7670479)
chr2 (7-108)||(16567724-16567825)
[»] chr7 (13 HSPs)
chr7 (14-123)||(41482419-41482528)
chr7 (21-126)||(24429704-24429809)
chr7 (7-119)||(39594635-39594747)
chr7 (4-126)||(2333983-2334104)
chr7 (12-109)||(39644909-39645006)
chr7 (7-105)||(10026437-10026535)
chr7 (7-50)||(44107776-44107819)
chr7 (12-123)||(45884641-45884751)
chr7 (7-109)||(23318951-23319053)
chr7 (7-70)||(24799451-24799514)
chr7 (46-109)||(47038533-47038596)
chr7 (14-86)||(44335070-44335142)
chr7 (75-107)||(45980471-45980503)
[»] chr6 (7 HSPs)
chr6 (4-121)||(8547436-8547553)
chr6 (15-114)||(8573796-8573895)
chr6 (84-126)||(16342710-16342752)
chr6 (32-114)||(18596636-18596718)
chr6 (7-116)||(12771875-12771984)
chr6 (17-119)||(129102-129204)
chr6 (4-53)||(14227943-14227992)
[»] chr5 (5 HSPs)
chr5 (7-126)||(34731269-34731388)
chr5 (7-109)||(13109709-13109811)
chr5 (7-109)||(13039715-13039817)
chr5 (73-125)||(26447895-26447947)
chr5 (3-65)||(32529433-32529495)
[»] chr3 (11 HSPs)
chr3 (1-134)||(40416942-40417075)
chr3 (7-126)||(32490903-32491022)
chr3 (15-121)||(20524860-20524966)
chr3 (12-121)||(51976193-51976302)
chr3 (28-126)||(43545434-43545532)
chr3 (4-99)||(48936324-48936417)
chr3 (7-126)||(45818598-45818717)
chr3 (75-126)||(45850751-45850802)
chr3 (7-125)||(7038604-7038722)
chr3 (12-126)||(32794879-32794993)
chr3 (32-114)||(38457762-38457844)


Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 31734310 - 31734585
Alignment:
Q  1 tgcttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagttttt 100  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  31734310 tgctttaatccgttgtttggtgcaccaataagaaatgataaattaaacctatttccaatcttatcccatccaccctttgttatttttatccttagttttt 31734409  T
Q  101 ggtgggttaacaacctgatagcataatattatcacatgcgcatcnnnnnnncttcaaaaccctctttcgactcccaccctctccaatgatctatttcaaa 200  Q
    ||||| |||||||| ||||| ||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31734410 ggtggattaacaacatgataacataatattgtcacatgcgcatcttttattcttcaaaaccctctttcgactcccaccctctccaatgatctatttcaaa 31734509  T
Q  201 attgattgcaattgttttttcttctctacaactgttcatcttcctccactccaccgccagcctcccctatctcttag 277  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  31734510 attgattgtaattgttttttcttctctgcaactgttcatcttcctccactccaccgccagcct-cactatctcttag 31734585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 22573133 - 22573254
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtg 104  Q
    |||||||||||||||||||||||| |||||||||||| || ||||| |||| |||| ||||||||  |  |||||| ||| |||||||||||||||||||    
T  22573133 tcaatccgttgtttggtgcaccaacaggaaatgataagtttaacctgtttctaatcctatcctattgaacctttgtaattcttatccttagtttttggtg 22573232  T
Q  105 ggttaacaacctgatagcataa 126  Q
    |||||||||| |||||| ||||    
T  22573233 ggttaacaacatgataggataa 22573254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 32889949 - 32890053
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttttggt 103  Q
    ||||||||||||||| ||| |||||| |||||||||| || |||||||||| |||| ||||| | || || ||||||| ||||||||||||| |||||||    
T  32889949 tcaatccgttgtttgatgccccaatatgaaatgataagtttaacctatttctaatcctatccca-cttctcctttgttgtttttatccttagattttggt 32890047  T
Q  104 gggtta 109  Q
    ||||||    
T  32890048 gggtta 32890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9028755 - 9028635
Alignment:
Q  1 tgcttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagttttt 100  Q
    ||||| |||| ||||||||||||||||| |  ||| ||||| ||||||||||||  |||| ||||||||  |  |||||| ||| |||||||| ||||||    
T  9028755 tgcttaaatcggttgtttggtgcaccaacataaaaggataatttaaacctatttttaatcctatcctattgaacctttgtaattcttatccttggttttt 9028656  T
Q  101 ggtgggttaacaacctgatag 121  Q
    | ||||||| |||||||||||    
T  9028655 gatgggttagcaacctgatag 9028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 39283705 - 39283824
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtg 104  Q
    ||||||| ||||||| |||||||| |  ||| |||||||||||||  ||| ||||| |||| |||  || |||| || |||||||| ||| |||||||||    
T  39283705 tcaatccattgtttgatgcaccaacataaaaggataaattaaaccatttttcaatcctatcatattcaccctttattttttttatctttaatttttggtg 39283804  T
Q  105 ggttaacaacctgatagcat 124  Q
    ||||| ||||||||||||||    
T  39283805 ggttagcaacctgatagcat 39283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 556786 - 556895
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttag--tttttggtgggttaac 111  Q
    ||||| ||||| |||||| ||||||||||||||||||||||| |||| ||||||||  || ||||||| || | |||||| |  |||||||||||||| |    
T  556786 tgtttcgtgcaacaatagaaaatgataaattaaacctatttctaatcatatcctattcaccctttgtttttctaatcctttgtttttttggtgggttagc 556885  T
Q  112 aacctgatag 121  Q
    ||| ||||||    
T  556886 aacatgatag 556895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 40028820 - 40028924
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttttggt 103  Q
    |||||| |||||||||||| |||| |||||||||||| || ||||| |||| ||||| |||||| || || |||||||||||||||||||||  ||| ||    
T  40028820 tcaatctgttgtttggtgcgccaacaggaaatgataactttaacctttttctaatctcatccta-ctcctcctttgttatttttatccttaggattttgt 40028918  T
Q  104 gggtta 109  Q
    ||||||    
T  40028919 gggtta 40028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 7547857 - 7547959
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttttggtgg 105  Q
    |||||||||||||||||||||| | |||||||||| || |||||||||   ||| ||||| | || || ||||| |||| ||||||||||||||||||||    
T  7547857 aatccgttgtttggtgcaccaacaagaaatgataagtttaacctattttttatcctatccca-cttctcctttgatattattatccttagtttttggtgg 7547955  T
Q  106 gtta 109  Q
    ||||    
T  7547956 gtta 7547959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 11066502 - 11066585
Alignment:
Q  26 caataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    |||||||||| ||||| ||||||||||||| |||| |||||||   |  |||||||||||||||||||| |||||||| |||||    
T  11066502 caataggaaaggataacttaaacctatttctaatcctatcctactcagcctttgttatttttatccttaatttttggtaggtta 11066585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 38503951 - 38503855
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    ||||||||||||||||| ||||||  |||| ||||||  | ||| || | |||||||   || |||||||||||||||  ||||||||||||||||||    
T  38503951 gttgtttggtgcaccaa-aggaaagaataacttaaactcacttctaaccctatcctactcaccctttgttatttttatttttagtttttggtgggtta 38503855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 45413888 - 45413766
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||||||    
T  45413888 ttcaatcggttgtttggtgcaccaataggaaaggataaattaaacctatttcctatcctatcctatctaacctttgttatttttatccttagtttttggt 45413789  T
Q  104 gggttaacaacctgatagcataa 126  Q
    |||||| ||||||||||||||||    
T  45413788 gggttagcaacctgatagcataa 45413766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 2183300 - 2183411
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    |||||||||||||||||||| ||| ||||||||||||  |||||||||| ||||||||| |  |||||||||||||||||||| |||||||||||||| |    
T  2183300 gttgtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatcctatccaacctttgttatttttatccttaatttttggtgggttagc 2183399  T
Q  112 aacctgatagca 123  Q
    ||||||||||||    
T  2183400 aacctgatagca 2183411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 26635378 - 26635260
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactc-tttgttatttttatccttagtttttggt 103  Q
    |||||||||| ||||||||||||| | || |||||||||| ||||||||||||||  ||||||| || ||| ||| ||||| ||||||||||||||||||    
T  26635378 tcaatccgttttttggtgcaccaacatgatatgataaatttaacctatttccaattctatccta-ctcctcctttattattcttatccttagtttttggt 26635280  T
Q  104 gggttaacaacctgatagca 123  Q
    |||||| |||||||||||||    
T  26635279 gggttagcaacctgatagca 26635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 34666399 - 34666528
Alignment:
Q  1 tgcttcaatccgttgtttggtgcaccaata----ggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagt 96  Q
    ||||||||| |||||||||||||| |||||    ||||||||||| ||||||||||||| |||| ||||||||   |||||| |||||||||||| ||      
T  34666399 tgcttcaatacgttgtttggtgcagcaatatataggaaatgataacttaaacctatttctaatcatatcctattccctctttcttatttttatccgtaac 34666498  T
Q  97 ttttggtgggttaacaacctgatagcataa 126  Q
    |||| |||||||| ||||||||||||||||    
T  34666499 tttttgtgggttagcaacctgatagcataa 34666528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 36625646 - 36625533
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    |||||||||||||| ||||||| ||||||||||||||||||| | |||| ||||||||  || |||||| ||| | ||||||| |||||| ||||||| |    
T  36625646 gttgtttggtgcactaataggatatgataaattaaacctattacgaatcctatcctattcaccctttgtaattctaatccttactttttgttgggttagc 36625547  T
Q  112 aacctgatagcata 125  Q
    ||| ||||||||||    
T  36625546 aacatgatagcata 36625533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 55945769 - 55945653
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtg 104  Q
    ||||||||||||||||||||||||||||||| |||||||  || ||||||| |||| ||||||||   |  ||| ||||||| ||| |||  ||||||||    
T  55945769 tcaatccgttgtttggtgcaccaataggaaaggataaatccaatctatttctaatcctatcctattctccatttcttattttaatctttaacttttggtg 55945670  T
Q  105 ggttaacaacctgatag 121  Q
    |||||||||| ||||||    
T  55945669 ggttaacaacatgatag 55945653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 42964561 - 42964462
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    |||||| | |||| ||||||||||||||| ||||| ||||||| ||| |  ||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  42964561 aatccggtatttgttgcaccaataggaaaggataatttaaacccattacttatcctatcctatctactc--tgttattttaatccttagtttttggtggg 42964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 19181522 - 19181421
Alignment:
Q  13 ttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaaca 112  Q
    |||||||||||||||| | || ||||||||||||||||||||| |||| |||||||   |  |||| |||||||| ||||||||||||||||| ||| ||    
T  19181522 ttgtttggtgcaccaacatgatatgataaattaaacctatttctaatcctatcctactcatcctttattatttttgtccttagtttttggtggattagca 19181423  T
Q  113 ac 114  Q
    ||    
T  19181422 ac 19181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 33451327 - 33451436
Alignment:
Q  11 cgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaa 110  Q
    |||||||||||||||||||| || |||||||| |||||||||| | | |  ||||||||  |  |||||| ||| | |||||||||||||| ||||||||    
T  33451327 cgttgtttggtgcaccaatatgatatgataaaataaacctattactacttctatcctattcatcctttgtaattataatccttagtttttgatgggttaa 33451426  T
Q  111 caacctgata 120  Q
    |||| |||||    
T  33451427 caacatgata 33451436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 44126013 - 44126118
Alignment:
Q  16 tttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacc 115  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||  ||  |||||| || | || ||| ||||||| ||||||| ||||     
T  44126013 tttggtgcagcaataggaaatgataaattaaacttatttctaatcctatcctattcaccttttgtttttctaattctttgtttttgatgggttagcaact 44126112  T
Q  116 tgatag 121  Q
    ||||||    
T  44126113 tgatag 44126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 43481414 - 43481302
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    ||||||||||||||||||| |||| ||||||||||||  ||||| ||||  ||| |||  ||  ||| |||||||||||| ||||||||| ||| ||| |    
T  43481414 gttgtttggtgcaccaataagaaaggataaattaaactcatttctaatc-catcttattcaccttttattatttttatcc-tagtttttgttggattagc 43481317  T
Q  112 aacctgatagcataa 126  Q
    |||||||||||||||    
T  43481316 aacctgatagcataa 43481302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 35320693 - 35320739
Alignment:
Q  75 ctttgttatttttatccttagtttttggtgggttaacaacctgatag 121  Q
    |||||||||||| |||||||||||||||||| |||  ||||||||||    
T  35320693 ctttgttattttaatccttagtttttggtggtttacaaacctgatag 35320739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 22202925 - 22203040
Alignment:
Q  6 caatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactc-tttgttatttttatccttagtttttggtg 104  Q
    |||||||||||||| |||  | ||| |||||||||| || |||||||||  |||| ||||||| |  ||| ||||||||||| ||||||   ||||||||    
T  22202925 caatccgttgtttgttgcgaccatatgaaatgataagtttaacctatttttaatcctatccta-cccctcttttgttattttaatcctttacttttggtg 22203023  T
Q  105 ggttaacaacctgatag 121  Q
    |||||  ||||||||||    
T  22203024 ggttacaaacctgatag 22203040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 6768259 - 6768466
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||| ||||||| ||| ||| ||||| |  |||||||||||||||||||| ||||||||    
T  6768259 ttcaatctgttgtttggtgtaccaatagaaaatgataaattaaacttatttcctatcctattctatccaacctttgttatttttatccttaatttttggt 6768358  T
Q  104 gggttaacaacctgatagcataatattat--cacatgcgcatcnnnnnnncttcaaa-accctctttcgactcccaccctctccaatga-tctatttcaa 199  Q
    ||||||  ||||||||||||||| |  ||  |||| |||||||       ||||||| ||||||||||||||||| ||||||||||| | ||||| ||||    
T  6768359 gggttaggaacctgatagcataacaacatcacacacgcgcatcttttattcttcaaagaccctctttcgactccctccctctccaataattctatgtcaa 6768458  T
Q  200 aattgatt 207  Q
    ||| ||||    
T  6768459 aatcgatt 6768466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 26793754 - 26793876
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatccta-tctactctttgttatttttatccttagtttttgg 102  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||| |||||| |||| ||||||| || || ||||||||||||||| ||||||||||||    
T  26793754 ttcaatccgttgtttggtgcaccaatagaaaaggataacttaaacttatttctaatcctatcctaatcaac-ctttgttatttttattcttagtttttgg 26793852  T
Q  103 tgggttaacaacctgatagcataa 126  Q
    ||||||| ||||||||||||||||    
T  26793853 tgggttagcaacctgatagcataa 26793876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 9383342 - 9383223
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| ||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||   || |||||||||||| ||||||| |||||| ||||    
T  9383342 aatccattgtttggtgcaccaataggaacggataaattaaaccaatttctaatcttatcctactcaccctttgttattttcatccttaatttttgatggg 9383243  T
Q  107 ttaacaacctgatagcataa 126  Q
    ||| ||||||||||||||||    
T  9383242 ttagcaacctgatagcataa 9383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 19806857 - 19806758
Alignment:
Q  21 tgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacctgata 120  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||||||  |||||||||| || | |||||||||||||||||||||||||||||||||    
T  19806857 tgcatcaataggaaaggataaattaaacctatttctaatcctatcctattcactctttgtttttctaatccttagtttttggtgggttaacaacctgata 19806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 4076454 - 4076340
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaa 113  Q
    ||||||||||| |||||||||| ||||||||||||||||| | |||| ||||||||  |||||||||| || | |||||||||||||||||| |||  ||    
T  4076454 tgtttggtgcatcaataggaaaggataaattaaacctattactaatcctatcctattcactctttgtttttctaatccttagtttttggtggattaggaa 4076355  T
Q  114 cctgatagcataata 128  Q
    |||||||| ||||||    
T  4076354 cctgataggataata 4076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 50005004 - 50004909
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    |||||||||||||||||  ||| ||||| ||||||||||||| |||| |||||||   || |||||||||||||||||||||||||||||||||||    
T  50005004 tgtttggtgcaccaataaaaaaggataatttaaacctatttctaatcctatcctaatcaccctttgttatttttatccttagtttttggtgggtta 50004909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 4950198 - 4950292
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    ||||||||||| |||||| ||||||||| ||||||  |||| ||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  4950198 tgtttggtgcatcaatagaaaatgataatttaaactcattttcaatcatatcctatttaccctttgttatttttatcc-tagtttttggtgggtta 4950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 42472057 - 42471969
Alignment:
Q  38 ataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacctgatagcataa 126  Q
    ||||| |||||||||| |  ||||||||||||    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  42472057 ataaaataaacctattacttatcttatcctattgcttctttgtaattttaatccttagtttttggtgggttaacaacctgatagcataa 42471969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 49236173 - 49236280
Alignment:
Q  13 ttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaaca 112  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||   || ||||||| | |  |||| |||||  ||||||| ||||||||||||||| ||    
T  49236173 ttgtttggtgcaccaatagaaaaggataaattaaacatatttcatttcctatcctacccaacctttcttattcatatccttggtttttggtgggttagca 49236272  T
Q  113 acctgata 120  Q
    ||||||||    
T  49236273 acctgata 49236280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 45792794 - 45792691
Alignment:
Q  5 tcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtg 104  Q
    |||||||||| ||||||||||||| || ||||||||| || ||| | |||| |||| ||||||||  |  |||||| ||| |||||||||||||||||||    
T  45792794 tcaatccgtt-tttggtgcaccaacagaaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtg 45792696  T
Q  105 ggtta 109  Q
    |||||    
T  45792695 ggtta 45792691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 7904161 - 7904256
Alignment:
Q  21 tgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacct 116  Q
    |||| |||||||| |||||||||||||||||||  ||||  | ||||||  |||||||||||||| || |||||||||| |||||| || ||||||    
T  7904161 tgcatcaataggatatgataaattaaacctattatcaattatctcctattcactctttgttatttctacccttagttttcggtgggctagcaacct 7904256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 8002780 - 8002685
Alignment:
Q  21 tgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacct 116  Q
    |||| |||||||| |||||||||||||||||||  ||||  | ||||||  |||||||||||||| || |||||||||| |||||| || ||||||    
T  8002780 tgcatcaataggatatgataaattaaacctattatcaattatctcctattcactctttgttatttctacccttagttttcggtgggctagcaacct 8002685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 42472108 - 42472062
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatt 53  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||    
T  42472108 aatccgttgtttggtgcatcagtaggaaatgataaaataaacctatt 42472062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 49288051 - 49288097
Alignment:
Q  75 ctttgttatttttatccttagtttttggtgggttaacaacctgatag 121  Q
    |||||||||||| |||||||||||| | ||||||| |||||||||||    
T  49288051 ctttgttattttaatccttagttttagttgggttagcaacctgatag 49288097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 7902048 - 7902089
Alignment:
Q  76 tttgttatttttatccttagtttttggtgggttaacaacctg 117  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  7902048 tttgttatttctacccttagtttttggtgggttagcaacctg 7902089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 7905498 - 7905539
Alignment:
Q  76 tttgttatttttatccttagtttttggtgggttaacaacctg 117  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  7905498 tttgttatttctacccttagtttttggtgggttagcaacctg 7905539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 20018611 - 20018656
Alignment:
Q  8 atccgttgtttggtgcaccaataggaaatgataaattaaacctatt 53  Q
    |||||||||||||| |||||| | || |||||||||||||||||||    
T  20018611 atccgttgtttggtacaccaacatgatatgataaattaaacctatt 20018656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 49288006 - 49288050
Alignment:
Q  16 tttggtgcaccaataggaaatgataaattaaacctatttccaatc 60  Q
    |||||||||||||||  |||||||||| |||||||||| ||||||    
T  49288006 tttggtgcaccaatacaaaatgataaaataaacctattgccaatc 49288050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 6457595 - 6457717
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||| |||| |||| || |||||||||||||||||||| ||||||||    
T  6457595 ttcaatctgttgtttggtgcaccaatagaaaatgataaattaaatcaatttccaatcatatcttatccaccctttgttatttttatccttaatttttggt 6457694  T
Q  104 gggttaacaacctgatagcataa 126  Q
    |||||||  |||| |||||||||    
T  6457695 gggttaattacctaatagcataa 6457717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 40626466 - 40626588
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    ||||||| | |||||||||||||||||||||| ||||| |||||  |||||| |||| |||||||   || |||| |||||||||||||||  |||||||    
T  40626466 ttcaatctgctgtttggtgcaccaataggaaaggataatttaaatatatttctaatcctatcctactcaccctttattatttttatccttaaattttggt 40626565  T
Q  104 gggttaacaacctgatagcataa 126  Q
    |||||||||||||||||||||||    
T  40626566 gggttaacaacctgatagcataa 40626588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 40054572 - 40054459
Alignment:
Q  13 ttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaaca 112  Q
    ||||||||||||||||||| |||||||||| ||||||||||   |||| ||||||||| |  |||||||||||| |||||||||||| | ||||||| ||    
T  40054572 ttgtttggtgcaccaatagaaaatgataaactaaacctattgttaatcctatcctatcaatcctttgttattttaatccttagttttagctgggttagca 40054473  T
Q  113 acctgatagcataa 126  Q
    |||| |||| ||||    
T  40054472 acctaataggataa 40054459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 6452471 - 6452581
Alignment:
Q  15 gtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaac 114  Q
    ||||| |||||||||| || ||||||||||||||||||| | |||||||||||||  || |||||| ||| | |||||||||||||| |||||||  |||    
T  6452471 gtttgatgcaccaataagatatgataaattaaacctattactaatcttatcctattcacgctttgtaattctaatccttagtttttgttgggttagaaac 6452570  T
Q  115 ctgatagcata 125  Q
    || ||||||||    
T  6452571 cttatagcata 6452581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 18665165 - 18665262
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||||| |||  |||| ||   || |||||||| ||||||||||| ||||||||||||||    
T  18665165 gttgtttcgtgcaccaaaaggaaaggataacttaaacctatttctaataatatcttactcaccctttgttaattttatccttaatttttggtgggtta 18665262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 5256379 - 5256479
Alignment:
Q  9 tccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtt 108  Q
    |||| |||||||||||||  |||||||||||||||||||| | ||   |||| ||||||||   ||||||||||||||||||||| ||||| | ||||||    
T  5256379 tccgctgtttggtgcaccggtaggaaatgataaattaaacttgttgttaatcctatcctattggctctttgttatttttatcctttgttttagctgggtt 5256478  T
Q  109 a 109  Q
    |    
T  5256479 a 5256479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 7670385 - 7670479
Alignment:
Q  15 gtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    ||||||||||||||||| ||||||||| || ||||| |||| |||| ||||||||  |   ||||| ||| ||||||||| ||||||||||||||    
T  7670385 gtttggtgcaccaatagaaaatgataagtttaacctgtttctaatcctatcctattgagcttttgtaattcttatccttaatttttggtgggtta 7670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 16567825 - 16567724
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttttggtgg 105  Q
    |||||||||||||||||||||| || ||| ||||| || |||||||||| |||| ||| ||  || || |||||||||| |||||| |||||||||||||    
T  16567825 aatccgttgtttggtgcaccaacagaaaaggataagtttaacctatttctaatcctat-ctcactcctcctttgttattcttatccatagtttttggtgg 16567727  T
Q  106 gtt 108  Q
    |||    
T  16567726 gtt 16567724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 41482528 - 41482419
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaa 113  Q
    ||||||||||||||| |||||| ||||| ||||||||||||  |||| |||||||   || ||||||||||||||||||||||||||||||||||| |||    
T  41482528 tgtttggtgcaccaacaggaaaggataacttaaacctatttttaatcatatcctactcaccctttgttatttttatccttagtttttggtgggttagcaa 41482429  T
Q  114 cctgatagca 123  Q
    ||||||||||    
T  41482428 cctgatagca 41482419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 24429704 - 24429809
Alignment:
Q  21 tgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacctgata 120  Q
    ||||||||||| ||||||||| ||||| ||||||  |||| |||| ||   || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  24429704 tgcaccaatagaaaatgataatttaaaactatttataatcctatcttactcaccctttgttatttttatccttagtttttggtgggttagcaacctgata 24429803  T
Q  121 gcataa 126  Q
    ||||||    
T  24429804 gcataa 24429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 39594635 - 39594747
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||| | ||||||||| |||  |  |||||| |||||||||||||||||||| ||||    
T  39594635 aatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaatcttatcatattcatcctttgtaatttttatccttagtttttgatggg 39594734  T
Q  107 ttaacaacctgat 119  Q
    ||| |||| ||||    
T  39594735 ttagcaacatgat 39594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 2334104 - 2333983
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    ||||||||| ||||||||||||||||||||   ||||| ||||||||||||  |||| ||||||||  ||  |||||||||||||||  | |||||||||    
T  2334104 ttcaatccggtgtttggtgcaccaataggattggataacttaaacctatttttaatcctatcctattcaccttttgttatttttatctctggtttttggt 2334005  T
Q  104 gggttaacaacctgatagcataa 126  Q
     ||||| ||||| ||||||||||    
T  2334004 tggttagcaacc-gatagcataa 2333983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 39644909 - 39645006
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    |||||||||||| ||||||| ||| ||||| ||||||| ||||  |||| |||||||   |  |||||||||||||||||||||||||||||||||||    
T  39644909 gttgtttggtgcgccaatagaaaaggataacttaaacccatttataatcctatcctactcatcctttgttatttttatccttagtttttggtgggtta 39645006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 10026437 - 10026535
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttttggtgg 105  Q
    ||||| |||||||||||||||| | |||||||||| || |||||||||| |||| ||||| | || || |||||||||| ||||||||||||||||||||    
T  10026437 aatcccttgtttggtgcaccaacatgaaatgataagtttaacctatttctaatcatatccca-ctcctcctttgttattcttatccttagtttttggtgg 10026535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 44107776 - 44107819
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacct 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  44107776 aatcctttgtttggtgcaccaataggaaatgataaattaaacct 44107819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 45884751 - 45884641
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    ||||||| |||||||| || |||  ||||| ||||| | ||||  |||| ||||||| || |||||||||||||||||||| ||||||||| ||||||||    
T  45884751 gttgtttagtgcaccagtatgaatggataatttaaaaccatttttaatcatatccta-ctcctctttgttatttttatcctaagtttttggcgggttaac 45884653  T
Q  112 aacctgatagca 123  Q
    || |||| ||||    
T  45884652 aatctgaaagca 45884641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 23319053 - 23318951
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    |||| |||||||||| |||||| | |||| ||||| ||||||||||||  |||| ||||||||  |  |||||| |||||||||||| ||||||| ||||    
T  23319053 aatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcctatcctattgagcctttgtaatttttatccttggtttttgatggg 23318954  T
Q  107 tta 109  Q
    |||    
T  23318953 tta 23318951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 24799451 - 24799514
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatc 70  Q
    ||||||||||||||||||||||||  | || |||||||||  ||||||| |||| |||||||||    
T  24799451 aatccgttgtttggtgcaccaatataatataataaattaattctatttctaatcctatcctatc 24799514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 47038533 - 47038596
Alignment:
Q  46 aacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggtta 109  Q
    |||||||||| |||| |||| || | || |||||||| ||||||| ||||||||||||||||||    
T  47038533 aacctatttctaatcatatcgtacccaccctttgttacttttatctttagtttttggtgggtta 47038596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 44335070 - 44335142
Alignment:
Q  14 tgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttt 86  Q
    |||||| ||||||||||| ||| ||||| ||||||  |||    ||| |||||||||||||||||||||||||    
T  44335070 tgtttgttgcaccaatagaaaaggataatttaaactcattatttatcctatcctatctactctttgttatttt 44335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 45980503 - 45980471
Alignment:
Q  75 ctttgttatttttatccttagtttttggtgggt 107  Q
    |||||||||||||||||||| ||||||||||||    
T  45980503 ctttgttatttttatccttactttttggtgggt 45980471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 8547553 - 8547436
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggt 103  Q
    |||||||||  |||||| ||| |||||||||| ||||| ||||||||||||| ||||||||| |||  || ||||||||||||||| |||||||||||||    
T  8547553 ttcaatccgccgtttggagcatcaataggaaaggataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggt 8547454  T
Q  104 gggttaacaacctgatag 121  Q
    |||||| |||| ||||||    
T  8547453 gggttagcaacatgatag 8547436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 8573895 - 8573796
Alignment:
Q  15 gtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaac 114  Q
    |||||| ||| |||||||||||||||| ||||||||||||| ||||||||| |||  || ||||||||||||||| ||||||||||||||||||| ||||    
T  8573895 gtttggagcatcaataggaaatgataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaac 8573796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 16342752 - 16342710
Alignment:
Q  84 ttttatccttagtttttggtgggttaacaacctgatagcataa 126  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  16342752 ttttatccttaatttttggtgggttagcaacctgatagcataa 16342710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 18596718 - 18596636
Alignment:
Q  32 gaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaac 114  Q
    |||||||||| ||||||||||||  |||| | || || | || |||| ||| |||||||||||||||||||||||||| ||||    
T  18596718 gaaatgataatttaaacctatttttaatcctttcataccaaccctttattacttttatccttagtttttggtgggttagcaac 18596636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 12771984 - 12771875
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| |||||||||||| ||||| || |||| |||| |||||| ||    ||||||||||||  |||||||||| |||| |||||||||||  | ||||    
T  12771984 aatcctttgtttggtgcagcaatatgatatgagaaatcaaaccttttatttatcttatcctataaactctttgtttttttaatccttagtttaggctggg 12771885  T
Q  107 ttaacaacct 116  Q
    ||| ||||||    
T  12771884 ttagcaacct 12771875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 129204 - 129102
Alignment:
Q  17 ttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacct 116  Q
    |||||||| ||||||||||  |||| ||||||  ||||  |||| |||| |||  || |||||||||||||||| |||||||||| |||| || |||| |    
T  129204 ttggtgcatcaataggaaaaaataacttaaactcatttttaatcctatcatattcaccctttgttatttttatctttagtttttgatgggctagcaacat 129105  T
Q  117 gat 119  Q
    |||    
T  129104 gat 129102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 14227992 - 14227943
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatt 53  Q
    ||||||||||||||||| |  || |||||||||||||| |||||||||||    
T  14227992 ttcaatccgttgtttggagtgccgataggaaatgataacttaaacctatt 14227943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 34731269 - 34731388
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||   |||| ||||||||| |  |||||||||||| |||||||||||| | ||||    
T  34731269 aatcccttgtttggtgcaccaataggaaaggataaactaaacctattgttaatcctatcctatcaatcctttgttattttaatccttagttttagctggg 34731368  T
Q  107 ttaacaacctgatagcataa 126  Q
    ||| ||||||||||| ||||    
T  34731369 ttagcaacctgataggataa 34731388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 13109709 - 13109811
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| ||||||||||| || |||| ||||||||| || ||| |||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  13109709 aatccattgtttggtgcgcccatagaaaatgataagtttaacatatttctaatcatatcctatccaccctttgttatttttatccttagtttttggtggg 13109808  T
Q  107 tta 109  Q
    |||    
T  13109809 tta 13109811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 13039715 - 13039817
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| ||||||||||| || |||||||||||||| || ||| |||||| |||  ||||||||| |  |||| |||||||||||||||||||||||||||    
T  13039715 aatccattgtttggtgcgcccataggaaatgataagtttaacatatttctaattatatcctatccatcctttattatttttatccttagtttttggtggg 13039814  T
Q  107 tta 109  Q
    |||    
T  13039815 tta 13039817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 26447895 - 26447947
Alignment:
Q  73 ctctttgttatttttatccttagtttttggtgggttaacaacctgatagcata 125  Q
    ||||||| ||||||||||||||||||||  ||||||| |||| ||||||||||    
T  26447895 ctctttgatatttttatccttagtttttaatgggttagcaacatgatagcata 26447947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 32529495 - 32529433
Alignment:
Q  3 cttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatc 65  Q
    |||||||||| |||||||||||||||||  |||  ||||||||||| |||||| |||| ||||    
T  32529495 cttcaatccgctgtttggtgcaccaataaaaaagaataaattaaacttatttctaatcatatc 32529433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40416942 - 40417075
Alignment:
Q  1 tgcttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagttttt 100  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||  |||||  |||| ||||||| | || |||| ||||| |||||||| ||||||    
T  40416942 tgcttcaatccgttgtttggtgcatcaacagaaaatgataaattaaatatatttttaatcctatcctaccaaccctttattattcttatccttggttttt 40417041  T
Q  101 ggtgggttaacaacctgatagcataatattatca 134  Q
    | | ||||| ||||||||||||| || |||||||    
T  40417042 gtttggttagcaacctgatagcacaaaattatca 40417075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 32490903 - 32491022
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| |||||||||||||||||| |||| |||||   ||||||||| | |||  ||||||||| |  |||||||||||| |||||||||||| | ||||    
T  32490903 aatcctttgtttggtgcaccaatatgaaaggataatcgaaacctattgctaattctatcctatcaatcctttgttattttaatccttagttttagctggg 32491002  T
Q  107 ttaacaacctgatagcataa 126  Q
    ||| ||||||||||| ||||    
T  32491003 ttagcaacctgataggataa 32491022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 20524860 - 20524966
Alignment:
Q  15 gtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaac 114  Q
    |||||||||||||||| || | ||||||||||||| |||   |||| |||||||||||  |||||| ||||| ||||||  |||||||||||||||||||    
T  20524860 gtttggtgcaccaatatgatacgataaattaaacccattagtaatcatatcctatctatcctttgtaattttaatccttgatttttggtgggttaacaac 20524959  T
Q  115 ctgatag 121  Q
     ||||||    
T  20524960 ttgatag 20524966  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 51976193 - 51976302
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    |||||||||||||||||||| |||||||||  |||  ||||||| |||||||||||||  ||  |||||| || | ||||||   |||||||||||||||    
T  51976193 gttgtttggtgcaccaatagaaaatgataagctaaggctatttctaatcttatcctattcaccatttgtttttctaatccttgaattttggtgggttaac 51976292  T
Q  112 aacctgatag 121  Q
    ||||||||||    
T  51976293 aacctgatag 51976302  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 43545434 - 43545532
Alignment:
Q  28 ataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaacctgatagcataa 126  Q
    |||||||||||||| |||||||| | || | |||||| ||||| | |||||||||||||| || |||||||||||||||||| ||| | ||| ||||||    
T  43545434 ataggaaatgataacttaaacctgtctctagtcttattctatccattctttgttatttttctcattagtttttggtgggttagcaatccgatggcataa 43545532  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 48936417 - 48936324
Alignment:
Q  4 ttcaatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctact-ctttgttatttttatccttagtttt 99  Q
    ||||||||||||||||||||||||| |||||  ||||| |||||||| |||  |||| ||||||| || || |||||||||||||||||||||||||    
T  48936417 ttcaatccgttgtttggtgcaccaacaggaa--gataatttaaacctgtttttaatcctatccta-cttctcctttgttatttttatccttagtttt 48936324  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 45818717 - 45818598
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    |||||||||||||||||| || ||| ||| |||||| ||||||||||    ||| ||||  ||  | |||||||| |||||||||||||||||||||| |    
T  45818717 aatccgttgtttggtgcatcagtagcaaaagataaaataaacctattgtttatcctatctcattcattctttgttgtttttatccttagtttttggtgag 45818618  T
Q  107 ttaacaacctgatagcataa 126  Q
    ||  |||| |||||||||||    
T  45818617 ttggcaacttgatagcataa 45818598  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 45850802 - 45850751
Alignment:
Q  75 ctttgttatttttatccttagtttttggtgggttaacaacctgatagcataa 126  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||    
T  45850802 ctttgttattcttatccttgatttttggtgggttagcaacctgatagcataa 45850751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 7038604 - 7038722
Alignment:
Q  7 aatccgttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtggg 106  Q
    ||||| || |||||| ||| ||||||| ||||||||||||||||||| | |||| |||| |||  |   ||||| ||| | ||||||| |||||| ||||    
T  7038604 aatccattatttggtacactaataggatatgataaattaaacctattactaatcctatcgtattcatcttttgtaattctaatccttactttttgttggg 7038703  T
Q  107 ttaacaacctgatagcata 125  Q
    ||| |||| ||||||||||    
T  7038704 ttagcaacatgatagcata 7038722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 32794993 - 32794879
Alignment:
Q  12 gttgtttggtgcaccaataggaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaac 111  Q
    |||| ||||||||| ||||  ||||||||| |||||  |||||| ||| |  |||||   | ||||||||||||||||  |||||||||||||| |||||    
T  32794993 gttggttggtgcactaataaaaaatgataatttaaatttatttctaatttgttcctactcattctttgttatttttatagttagtttttggtggattaac 32794894  T
Q  112 aacctgatagcataa 126  Q
    ||  ||||| |||||    
T  32794893 aatttgataacataa 32794879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 38457762 - 38457844
Alignment:
Q  32 gaaatgataaattaaacctatttccaatcttatcctatctactctttgttatttttatccttagtttttggtgggttaacaac 114  Q
    |||| ||||| ||||||  ||||| |||| ||||||||  ||  ||||||| ||||||||||||| |||||||||||| ||||    
T  38457762 gaaaggataatttaaactcatttctaatcctatcctattcaccttttgttacttttatccttagtatttggtgggttagcaac 38457844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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