View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10733_high_1 (Length: 271)
Name: NF10733_high_1
Description: NF10733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10733_high_1 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 49513845 - 49514097
Alignment:
| Q |
19 |
aattaattgtacgaggttcagaagtatggatgaggtgcttgtgtgcttgggaaacgtacaaatttggttacgtttgaattgaaccaaatataaataatgc |
118 |
Q |
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| T |
49513845 |
aattaattgtacgaggttcagaagtatggatgaggtgcttgtgtgcttgggaaacgtacaaatttggttacttttgaattgaaccaaatataaataatgc |
49513944 |
T |
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| Q |
119 |
atagtatatatgattaaaaacaaacaaacataaagtatgcttaaatctaaatattattcagctacacgtttgcacgatgaagccgctgcctacactcaaa |
218 |
Q |
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| T |
49513945 |
atagtatatatgattaaaaacaaacaaacataaagtatgcttaaatctaaatattattcagctacacgtttgcacgatgaagccgctgcctacactcaaa |
49514044 |
T |
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| Q |
219 |
tgttgtcatctttgatttgaaattaacttgtagggcttgtagttgatgctgac |
271 |
Q |
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| T |
49514045 |
tgttgtcatctttgatttgaaattaacttgtagggcttgtagttgatgctgac |
49514097 |
T |
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