View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10734_low_6 (Length: 201)
Name: NF10734_low_6
Description: NF10734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10734_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 29170475 - 29170390
Alignment:
| Q |
8 |
gaggagcagagaacaaacttaaaatatgcaaagaagaaagattgtaaagtgttattctatatttagtaaggtgttgatacaaacat |
93 |
Q |
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| T |
29170475 |
gaggatcaaagaacaaacttaaaatatgcaaagaagaaagattgtaaagtgttattctatatttagtaaggtgttgatacaaacat |
29170390 |
T |
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Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 29170346 - 29170275
Alignment:
| Q |
89 |
aacatagtagagaagtatcatgaaggtgtagacaaagtaaagtaggtcaagcttcaatctttaagaagaaag |
160 |
Q |
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| T |
29170346 |
aacatagtagagaagtatcatgaaggtgtagacaaagtaaagtaggtcaagcttcaatctttaagaagaaag |
29170275 |
T |
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