View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10735_high_5 (Length: 237)
Name: NF10735_high_5
Description: NF10735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10735_high_5 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 7719763 - 7719998
Alignment:
| Q |
1 |
aatttctgaaacggtcctgaatagatatatgaaggtaaaaagtgtataactacctacnnnnnnngtcatattctttaatgaaaacattaactaaaagata |
100 |
Q |
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| T |
7719763 |
aatttttgaaacggtcctgaatagatatatgaaggtgaaaagtgtataactaactaccttttt-gtcatattctttaatgaaaacattaactaaaagata |
7719861 |
T |
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| Q |
101 |
atttctaaaaatccatatgtataattaaaatgatcaaataaaacttatactactataggtgttctctcttaattatcacctagcttttactagaaattaa |
200 |
Q |
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| T |
7719862 |
atttctaaaaatccatatgtataattaaaatgatcaaataaaacttatactactataggtgttctctcttaattatcacctagcttttactagaaattaa |
7719961 |
T |
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| Q |
201 |
aatctcaaacttttaattatacatgcattattatttc |
237 |
Q |
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| T |
7719962 |
aatctcaaacttttaattatacatgtattattatttc |
7719998 |
T |
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