View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10736_low_15 (Length: 239)
Name: NF10736_low_15
Description: NF10736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10736_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38933064 - 38933293
Alignment:
| Q |
1 |
acttctaaataaaggtctgaatattcatgagttattttattgactgaatttcatagaatatttatacaatttaattgatggaaaagaaagctagttattg |
100 |
Q |
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| T |
38933064 |
acttctaaataaaggtctgaatattcatgagttattttattgactgaatttgatagaatatttatacaa-ttaattgatggaaaagaaagctagttattg |
38933162 |
T |
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| Q |
101 |
gtaactaactttctgttttatac------aagaaaaagattatcaaactattttgaattggtctttagtctccttttacactcccttgcaaactcatgga |
194 |
Q |
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||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
38933163 |
gtaactaactttctgttttatacaacaagaaaaaaaagattaacaaactattttgaattggtctttggtctccttttacactcccttgcaaactcatgga |
38933262 |
T |
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| Q |
195 |
tgaatgattatgaactc--taagtttatagc |
223 |
Q |
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||||||||||||||||| |||||||||||| |
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| T |
38933263 |
tgaatgattatgaactctttaagtttatagc |
38933293 |
T |
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