View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10736_low_5 (Length: 304)
Name: NF10736_low_5
Description: NF10736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10736_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 12 - 288
Target Start/End: Original strand, 46133457 - 46133733
Alignment:
| Q |
12 |
ataggcggaagagaaggaatcgaaacaccatgaaatgacttatcacatttctgacacatcaaacaacaaccctcataaaccctaggatattcatacatat |
111 |
Q |
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| T |
46133457 |
ataggcggaagagaaggaatcgaaacaccatgaaacgacttatcacatttctgacacatcaaacaacaaccctcataaaccctaggatattcatacatat |
46133556 |
T |
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| Q |
112 |
gataacaataaggacatgcagtccaaaaattcacatttccatttccatttcccaattgctcaaattcaaaacccttatcatactgtgctttttgaaccgg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46133557 |
gataacaataaggacatgcagtccaaaaattcacatttccatttccatttcccaatagctcaaattcaaaacccttatcatactgtgctttttgaaccgg |
46133656 |
T |
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| Q |
212 |
atcagacaaaacagcccatgcatccttaacgagtttgaaagcgagttcggcataagaaaacggattcttatcaggat |
288 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46133657 |
atcagacaaaacagcccaagcatccttaacgagtttgaaagcgagttcggcataagaaaacggattcttatcaggat |
46133733 |
T |
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