View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10736_low_6 (Length: 291)
Name: NF10736_low_6
Description: NF10736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10736_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 13815863 - 13815603
Alignment:
| Q |
23 |
acatcggatcccaagtttaggtcctagttttgacatttttagtttacccgtttctctcacctcttgtaattattacaaatgatctatatatagaaatcag |
122 |
Q |
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| T |
13815863 |
acatcggatcccaagtttaggtcctagttttgacatttttagtttacccgtttctctcacctcttgtaattattacaaatgatctatatatagaaatcag |
13815764 |
T |
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| Q |
123 |
tttatactctacagtttagaatacaataattgaatgttgatgttactgatgtcagatagggttaaaattgtgtttaactgagttcttctcatactgctga |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13815763 |
tttatactctacagtttagaatacaataattgaatgttgatgttactgatgtcagatagggttaaaattgtgtttaactgagttcttctcatactgctga |
13815664 |
T |
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| Q |
223 |
atccttgctgcataaataaaattagttatacattcgtgcttttacctctttctcctatgct |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13815663 |
atccttgctgcataaataaaattagttatacattcgtgcttttacctctttctcctatgct |
13815603 |
T |
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