View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10737_low_4 (Length: 410)
Name: NF10737_low_4
Description: NF10737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10737_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 15 - 406
Target Start/End: Original strand, 45025016 - 45025407
Alignment:
| Q |
15 |
atacaaaacaaattttagttgttatgcatcaggacaaagccatatccaaggaagctggttcatacgcgttgtttctgataccgagtttgttcgcatatgg |
114 |
Q |
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| T |
45025016 |
atacaaaacaaattttagttgttatgcatcaggacaaagccatatccaaggaagctggttcatacgcgttgtttctgataccgagtttgttcgcatatgg |
45025115 |
T |
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| Q |
115 |
tcctctccagtgcattctcaagttcttgcaaacacaaaacattgtcctcccaatggtgataacttctgggattgcagctttgcttcatacccttttgtgt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45025116 |
tcctctccagtgcattctcaagttcttgcaaacacaaaacattgtcctcccaatggtgataacttctgggattgcagctttgcttcatacccttttgtgt |
45025215 |
T |
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| Q |
215 |
tggcttttggtttttgaatttaagcttggaagtaaaggggcagctatatccaattctatatgttattgggtcaatgtgttgttgatttcactctatgtaa |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45025216 |
tggcttttggtttttgaatttaagcttggaagtaaaggggcagctatatccaattctatatgttattgggtcaatgtgttgttgatttcactctatgtaa |
45025315 |
T |
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| Q |
315 |
aattttcttctacttgtaaacaaacatggacagggttttcaaagagagctctgcaggatctctttgttttccttaggcttgctataccttca |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
45025316 |
aattttcttctacttgtaaacaaacatggacagggttttcaaagagagctctgcaggatctctttgttttccttagacttgctataccttca |
45025407 |
T |
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