View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10737_low_9 (Length: 344)
Name: NF10737_low_9
Description: NF10737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10737_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 20 - 334
Target Start/End: Original strand, 34626117 - 34626444
Alignment:
| Q |
20 |
taatgaagttcaacatcagagaattgaaggccatgcgagccatttctgatgacaattttgtcacttcgaccatccaagaaatctaagggtactaaggtta |
119 |
Q |
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| T |
34626117 |
taatgaagttcaacgtcagagaattgaaggccatgcgagccatttctgatgacaattttgtcaattccaccatccaagaaatctaagggtactaaggtta |
34626216 |
T |
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| Q |
120 |
gacttagacaaacattgcaacgcaaaggcaa-------------caactttgctttcacagggtcagtcgaatcctataaagcaggtaccttttattggt |
206 |
Q |
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| T |
34626217 |
gacttagacaaacattgcaacgcaaaggcaacaaatcattgcaacaactttgctttcacagggtcagtcgaatcctataaagcaggtaccttttattggt |
34626316 |
T |
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| Q |
207 |
gcttaataattaaaattttattctattgaatctatccatacatttaaacaaatgttttaaaatttctttcatagatttctctcgaatgtaccgtcatcgc |
306 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
34626317 |
gcttaataattaaaattttattctatcgaatctatccatacatttaaacaaatgttttaaaatttctttcatagatttctctcgaatgtaccgtcatccc |
34626416 |
T |
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| Q |
307 |
ctttttccatatgcataggcaacctttg |
334 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34626417 |
ctttttccatatgcataggcaacctttg |
34626444 |
T |
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