View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10738_high_4 (Length: 241)
Name: NF10738_high_4
Description: NF10738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10738_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 4269455 - 4269635
Alignment:
| Q |
1 |
tataaattcaaaattgggacaaacaatgtgagatcttttgttaagagaaatcttgcaaatacttaaataagaagaagacggaaaacatttgatatattag |
100 |
Q |
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| T |
4269455 |
tataaattcaaaattgggacaaacaatgtgagatcttttgttaagagaaatcttgcaaatacataaataagaagaagacggaaaacatttgatatattag |
4269554 |
T |
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| Q |
101 |
aatacggaattgaatttataatatttctcttattcgtactctatgtgtgaatttgtctcttttttttatgaatgggaaagc |
181 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
4269555 |
aatatggaattgaatttataatatttctcttattcgtactctatgtgtgaatttctctcttttttttatgaatgggaaagc |
4269635 |
T |
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