View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10738_low_10 (Length: 252)
Name: NF10738_low_10
Description: NF10738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10738_low_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 29 - 252
Target Start/End: Original strand, 9298619 - 9298842
Alignment:
| Q |
29 |
aaaggtgttgatattaaaattaagtgatggcaacataatttttaatacatatttttcaaaactcttttgaattgattatgtgggtctcgtaaatttggag |
128 |
Q |
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| T |
9298619 |
aaaggtgttgatattaaaattaaatgatggcaacataatttttaatacatatttttcaaaactcttttgaattgattatgtgggtatcgtaaatttggag |
9298718 |
T |
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| Q |
129 |
gactcagtgtgaattttaatcgatcaaaaacattttgttgaaacatgtacttgaagatcaatgtgtttcttagcattatttatcatgtacttgaataggg |
228 |
Q |
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| T |
9298719 |
gattcactatgaattttaatcaatcaaaaacattttgttgaaacatgtacttgtagatcaatgtgtttcttagcattatttatcatgtacttgaataggg |
9298818 |
T |
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| Q |
229 |
agcttgcaatgcacatcatattct |
252 |
Q |
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| T |
9298819 |
agcttgcaatgcacatcatattct |
9298842 |
T |
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