View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10738_low_15 (Length: 226)
Name: NF10738_low_15
Description: NF10738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10738_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 5652425 - 5652231
Alignment:
| Q |
16 |
agagatgcgggcaaatgcaccaatgagactttagtagcgcgttatagtcttcaatgcaatatataaggatataactcagaggaaggcgatattccagaat |
115 |
Q |
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| T |
5652425 |
agagatgcgggcaaatgcaccaatgagactttagtagcgcgttatagtcttcaatgcaatatataagtatataactcagaggaaggcgatattccagaat |
5652326 |
T |
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| Q |
116 |
gaaaacatggcctggaagtatcatgaatgaatgactatcaaagcacgttcaagtaaggatgacaaatggcacggtctgttaacacacccaaaata |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5652325 |
gaaaacatggcctggaagtatcatgaatgaatgactatcaaagcacgttcaagtaaggatgacaaatggcacggtctgttaacacacccaaaata |
5652231 |
T |
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