View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10738_low_9 (Length: 261)
Name: NF10738_low_9
Description: NF10738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10738_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 6 - 224
Target Start/End: Complemental strand, 11133282 - 11133064
Alignment:
| Q |
6 |
atcaactacactctttcacaaggaaccaacattacgttaaacaataatatacaatgaaatataagattaagataaataaggaacctaaaattgaatgaaa |
105 |
Q |
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| T |
11133282 |
atcaactacactctttcgcaaggaaccaacattacgttaaacaataatatacaatgaaatataagattaagataaataaggaacctaaaattgaatgaaa |
11133183 |
T |
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| Q |
106 |
ttgaaaagcaacatatttagcatcaacaaagctactacataggtagtaaaaacttcaaaaggaagagatcgagtagactatagtataaaacataatgcgt |
205 |
Q |
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| T |
11133182 |
ttgaaaagcaacatatttagcatcaacaaagctactacataggtagtaaaaacttcaaaaggaagagattgagtagactatagtataaaacataatgtgt |
11133083 |
T |
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| Q |
206 |
ccattctctcaaattgaac |
224 |
Q |
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||||||||||||||||||| |
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| T |
11133082 |
ccattctctcaaattgaac |
11133064 |
T |
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