View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10739_high_40 (Length: 204)
Name: NF10739_high_40
Description: NF10739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10739_high_40 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 28775996 - 28775826
Alignment:
| Q |
22 |
ccgttctcatcatgctcgtcctaagtctacaaatggtgaaggagtgtctgcgtttttgttaatggttggcataatggttgtcatttatgttgtatgtcgt |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28775996 |
ccgttctcatcatgctcgtcctaagtctacaaatggtgaaggagggtctgcgtttttgttaatggttggcataatggttgtcatttatgttgtatgtcgt |
28775897 |
T |
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| Q |
122 |
tgtacagaaaacaatgatactccagttactgtactcaagcttcaggtttgttaacaaaaacatctattctt |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28775896 |
tgtacagaaaacaatgatactccagttactgtactcaagcttcaggtttgttaacaaaaacatctattctt |
28775826 |
T |
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