View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10739_low_32 (Length: 250)
Name: NF10739_low_32
Description: NF10739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10739_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19811874 - 19811639
Alignment:
| Q |
1 |
agacatattgaaaaagtgtggtttgcacctcaattattgttatagggtaaaacattgtttatattgattattatgtgcataagttttacaaagcagatat |
100 |
Q |
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| T |
19811874 |
agacatattgaaaaagtgtggtttgcacctcaattattgttatagtgtaaagcattgtttatattgattattatgtgcataagttttacaaagcagatat |
19811775 |
T |
|
| Q |
101 |
ctatgagaaaataaatacttaagaaattatttatatttatgattggtgtaccacaacatcatctaaccaaaattacattttaacgtcaccttgttattga |
200 |
Q |
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| T |
19811774 |
ctatgagaaaataaatacttaagaaattatttatatttatcattggtgcaccacaacatcatctaaccaaaattacattttaacgtcaccttgttattga |
19811675 |
T |
|
| Q |
201 |
aagtatatacaaaggcaataacgttattctctcccc |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
19811674 |
aagtatatacaaaggcaataacgttattctctcccc |
19811639 |
T |
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