View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10739_low_42 (Length: 236)
Name: NF10739_low_42
Description: NF10739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10739_low_42 |
 | |
|
| [»] chr3 (4 HSPs) |
| |
|
| [»] chr5 (2 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr1 (2 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 17716411 - 17716645
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaat |
100 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17716411 |
ttccgatcgactagcaaatctttaatgttttgaataagaacggcatagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagagaat |
17716510 |
T |
|
| Q |
101 |
ccgagtagcacataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcg |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
17716511 |
ccgagtagcacataaaatcatt-catgttcaagtccatagccatattcagcccttggtagatagctgttagctctgccagcagtatgtccgttgagtgcg |
17716609 |
T |
|
| Q |
201 |
gaatgaaaccggagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
17716610 |
gaatgaaaccagagaaacttgagatgaacagacctg |
17716645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19017640 - 19017874
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaat |
100 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19017640 |
ttccgatcgactagcaaatctttaatgttttgaataagaacggcatagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagagaat |
19017739 |
T |
|
| Q |
101 |
ccgagtagcacataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcg |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
19017740 |
ccgagtagcacataaaatcatt-catgttcaagtccatagccatattcagcccttggtagatagctgttagctctgccagcagtatgtccgttgagtgcg |
19017838 |
T |
|
| Q |
201 |
gaatgaaaccggagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
19017839 |
gaatgaaaccagagaaacttgagatgaacagacctg |
19017874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 37145723 - 37145519
Alignment:
| Q |
31 |
tgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcacataaaatcattccatgttc |
130 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| | ||||| ||| ||| |
|
|
| T |
37145723 |
tgaatgaggacggcgtaggtgtgatatctcggagtgtcattcataataagattaactgcaagaagggaatccgagtagcacatgacgtcatt-catattc |
37145625 |
T |
|
| Q |
131 |
aagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccggagaaacctgagatgaaca |
230 |
Q |
| |
|
||||| ||||||||| ||| ||||||| || || ||||||||||| ||| |||||| || || | ||| ||||||||||| || |||||||||| || |
|
|
| T |
37145624 |
aagtcaataaccatatgcagaccttggtgaatcgcggttagctcggcttgcaatatgtccgtcgaattcgggatgaaaccggaaaatcctgagatgagca |
37145525 |
T |
|
| Q |
231 |
aacctg |
236 |
Q |
| |
|
| |||| |
|
|
| T |
37145524 |
agcctg |
37145519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 53606367 - 53606590
Alignment:
| Q |
12 |
tagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcac |
111 |
Q |
| |
|
||||| |||||| ||||| || || ||| |||||||||||||| |||| || || |||||| || ||||||||||| || |||||||||||||||||| |
|
|
| T |
53606367 |
tagcaggtctttgatattctggataagagcggcgtagatgtggtatctaggagtgtcattcgcaataagattaacagctagaagggaatccgagtagcac |
53606466 |
T |
|
| Q |
112 |
ataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccg |
211 |
Q |
| |
|
|| | ||||| || ||||| |||||||||| ||||| ||||||| |||||||||||||| || |||| ||| || | ||| | ||||||| |||| |
|
|
| T |
53606467 |
attatctcatt-cacattcaaatccgtaaccaatttcagtccttggtgaatagctgttagctccgctagcaatatatcagctgaattaggaatgagaccg |
53606565 |
T |
|
| Q |
212 |
gagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|| || |||||||| |||||||||| |
|
|
| T |
53606566 |
gaaaagcctgagataaacaaacctg |
53606590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 174; Significance: 9e-94; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 8684806 - 8684578
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaat |
100 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8684806 |
ttccgatcgactagcaaatctttaatgttttgaataagaacagcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagagaat |
8684707 |
T |
|
| Q |
101 |
ccgagtagcacataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcg |
200 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
8684706 |
ctgagtagcacataaaatcatt-catgttcaagtccatagccatattcagcccttggtagatagctgttagctctgccagcagtatgtccgttgagtgcg |
8684608 |
T |
|
| Q |
201 |
gaatgaaaccggagaaacctgagatgaaca |
230 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |
|
|
| T |
8684607 |
gaatgaaaccagagaaacctgagatgaaca |
8684578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 234
Target Start/End: Original strand, 1297576 - 1297772
Alignment:
| Q |
37 |
agaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcacataaaatcattccatgttcaagtcc |
136 |
Q |
| |
|
|||||||||||||||||| |||| || || |||||| || ||||||||||| || |||||||||||||||||||| | ||||| || ||||| ||| |
|
|
| T |
1297576 |
agaacggcgtagatgtggtatctaggagtgtcattcgcaataagattaacagctagaagggaatccgagtagcacattatctcatt-cacattcaaatcc |
1297674 |
T |
|
| Q |
137 |
gtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccggagaaacctgagatgaacaaacc |
234 |
Q |
| |
|
|||||| |||| ||||||| |||||||||||||| || |||| || | |||||| | |||||||||||||| || |||||||| || ||||| |
|
|
| T |
1297675 |
ataaccaatttcattccttggtgaatagctgttagctccgctagcaaaatatatgttgaattaggaatgaaaccggaaaagcctgagattaaaaaacc |
1297772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16781621 - 16781388
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaat |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16781621 |
ttccgatcaactagcaagtctttaatattc-gaatgagaacggcgtagatgtggaatctcgga-tatcattcatgataagattaacagcaaggagggaat |
16781524 |
T |
|
| Q |
101 |
ccgagtagcacataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggcca-gcagtatgtctgttgagtgc |
199 |
Q |
| |
|
| ||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
16781523 |
ctgagtagcacataagatcatt-catgttcaagtcaataaccatattcagcccttggtgaatagttgttagctcggccatgcagaatgtccgttgagtgc |
16781425 |
T |
|
| Q |
200 |
ggaatgaaaccggagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16781424 |
ggaatgaaactggagaaacctgagatgaacaaacctg |
16781388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 42689876 - 42690080
Alignment:
| Q |
31 |
tgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcacataaaatcattccatgttc |
130 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| | ||||| ||| ||| |
|
|
| T |
42689876 |
tgaatgaggacggcgtaggtgtgatatctcggagtgtcattcataataagattaactgcaagaagggaatccgagtagcacatgacgtcatt-catattc |
42689974 |
T |
|
| Q |
131 |
aagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccggagaaacctgagatgaaca |
230 |
Q |
| |
|
|| || ||| ||||| ||| ||||||| || || ||||||||||| ||| |||||| || || | ||| ||||||||||| || ||||||||||||| |
|
|
| T |
42689975 |
aaatcaataatcatatgcagaccttggtgaatcgcggttagctcggcttgcaatatgtccgtcgaattcgggatgaaaccggaaaatcctgagatgaaca |
42690074 |
T |
|
| Q |
231 |
aacctg |
236 |
Q |
| |
|
| |||| |
|
|
| T |
42690075 |
agcctg |
42690080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 11240276 - 11240042
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaat |
100 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||| | || |||| ||| ||||||| |
|
|
| T |
11240276 |
ttccgatcaactaacaagtctttaatattttgaatgagcacgacgtagatgtggaatctcggggtatcattcttgataaaatgaacaacaatcagggaat |
11240177 |
T |
|
| Q |
101 |
ccgagtagcacataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcg |
200 |
Q |
| |
|
||||||||||||| | ||| | || |||||| || || ||| |||||| |||| | ||| |||||||| |||||||||||||| || ||| | |
|
|
| T |
11240176 |
ccgagtagcacatgaggtcagt-cacgttcaattcaatagccaaattcagatcttgatggataatagttagctcagccagcagtatgtccgtcgaggtca |
11240078 |
T |
|
| Q |
201 |
gaatgaaaccggagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
||||||||| || |||||||||||||||||||||| |
|
|
| T |
11240077 |
gaatgaaactagacaaacctgagatgaacaaacctg |
11240042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 30961235 - 30961315
Alignment:
| Q |
12 |
tagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaag |
92 |
Q |
| |
|
||||||||| || ||||| || ||||| ||||||||| ||||| ||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
30961235 |
tagcaagtcctttatattctggatgaggacggcgtaggtgtggtatctcggggtatcattcatgataagattaacagcaag |
30961315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44567205 - 44567139
Alignment:
| Q |
1 |
ttccgatcgactagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtat |
67 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |
|
|
| T |
44567205 |
ttccgatcaactagcaagtctttaatattctgaatgagaacgatatagatgtggaatctcggggtat |
44567139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 33806042 - 33805838
Alignment:
| Q |
31 |
tgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcacataaaatcattccatgttc |
130 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||| || |||||||| || |||||||| ||||| || ||||||||||||||||| | ||||| ||| ||| |
|
|
| T |
33806042 |
tgaatgaggacggcgtaggtgtgatatctcggagtgtcattcataataagattaactgcaagaagtgaatccgagtagcacatgacgtcatt-catattc |
33805944 |
T |
|
| Q |
131 |
aagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccggagaaacctgagatgaaca |
230 |
Q |
| |
|
| || ||||||||| || ||||||| || || ||||||||||| ||| |||||| || || | || |||||||| || |||||||| ||||||| |
|
|
| T |
33805943 |
gaatcaataaccatatgcaaaccttggtgaattgcggttagctcggcttgcaatatgtccgtcgaatttgggatgaaaccagaaaaacctgatatgaaca |
33805844 |
T |
|
| Q |
231 |
aacctg |
236 |
Q |
| |
|
| |||| |
|
|
| T |
33805843 |
agcctg |
33805838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 721625 - 721402
Alignment:
| Q |
12 |
tagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcac |
111 |
Q |
| |
|
|||||| || || ||||| |||||||| ||||||||| ||||| ||||||| || |||||||| || |||||||| |||| ||||||||| |||||||| |
|
|
| T |
721625 |
tagcaaatcctttatattctgaatgaggacggcgtaggtgtggtatctcggagtgtcattcataataagattaactacaagaagggaatccaagtagcac |
721526 |
T |
|
| Q |
112 |
ataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccg |
211 |
Q |
| |
|
|| | |||||| || ||||| || ||| |||||||| |||||||| || ||||||||||||||| ||| |||| || | | ||| ||||||||| |
|
|
| T |
721525 |
atgacgtcattc-atattcaaatcaataatcatattcaacccttggtgaatcgctgttagctcggcctgcaaaatgttcgtcaaattcgggatgaaaccg |
721427 |
T |
|
| Q |
212 |
gagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|| ||||||||||||||||| |||| |
|
|
| T |
721426 |
gaaaaacctgagatgaacaagcctg |
721402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 38880848 - 38880626
Alignment:
| Q |
12 |
tagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcac |
111 |
Q |
| |
|
|||||| || || ||||| |||||||| ||| ||||| ||||| |||||| || |||||||| || |||||||| ||||| |||||||||||||||||| |
|
|
| T |
38880848 |
tagcaaatcctttatattctgaatgaggacgacgtaggtgtggtatctcga-gtgtcattcataataagattaactgcaagaagggaatccgagtagcac |
38880750 |
T |
|
| Q |
112 |
ataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccg |
211 |
Q |
| |
|
|| | ||||| ||| ||||| || ||| ||||||||||||||||| || |||||||||| |||| || ||||| || || | ||| ||||||||| |
|
|
| T |
38880749 |
atgacgtcatt-catattcaaatcaataatcatattcagcccttggtgaatcgctgttagcttggcctacaaaatgtccgtcgaattcgggatgaaaccg |
38880651 |
T |
|
| Q |
212 |
gagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|| ||||||||||||||||| |||| |
|
|
| T |
38880650 |
gaaaaacctgagatgaacaagcctg |
38880626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 46831507 - 46831284
Alignment:
| Q |
12 |
tagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcac |
111 |
Q |
| |
|
||||| |||||| ||||| || || ||| |||||||||||||| |||| || || |||||| || ||||||||||| || |||||||||||||||||| |
|
|
| T |
46831507 |
tagcaggtctttgatattctggataagagcggcgtagatgtggtatctaggagtgtcattcgcaataagattaacagctagaagggaatccgagtagcac |
46831408 |
T |
|
| Q |
112 |
ataaaatcattccatgttcaagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccg |
211 |
Q |
| |
|
|| | ||||| || ||||| |||||||||| ||||| ||||||| |||||||||||||| || |||| ||| || | ||| | ||||||| |||| |
|
|
| T |
46831407 |
attatctcatt-cacattcaaatccgtaaccaatttcagtccttggtgaatagctgttagctccgctagcaatatatcagctgaattaggaatgagaccg |
46831309 |
T |
|
| Q |
212 |
gagaaacctgagatgaacaaacctg |
236 |
Q |
| |
|
|| || |||||||| |||||||||| |
|
|
| T |
46831308 |
gaaaagcctgagataaacaaacctg |
46831284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 48953623 - 48953549
Alignment:
| Q |
11 |
ctagcaagtctttaatattttgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaa |
85 |
Q |
| |
|
||||||| || || ||||| || || ||||| ||||||||||| ||||||| |||||||||||||| ||||||| |
|
|
| T |
48953623 |
ctagcaaatccttgatattgtggataagaactgcgtagatgtgatatctcggggtatcattcatgataagattaa |
48953549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 45210908 - 45211112
Alignment:
| Q |
31 |
tgaatgagaacggcgtagatgtggaatctcggtgtatcattcatgatgagattaacagcaaggagggaatccgagtagcacataaaatcattccatgttc |
130 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||| || |||||||| || |||||||| ||||| || ||||||||||||||||| | ||||| ||| ||| |
|
|
| T |
45210908 |
tgaatgaggacggcgtaggtgtgatatctcggagtgtcattcataataagattaactgcaagaagtgaatccgagtagcacatgacgtcatt-catattc |
45211006 |
T |
|
| Q |
131 |
aagtccgtaaccatattcagcccttggtatatagctgttagctcggccagcagtatgtctgttgagtgcggaatgaaaccggagaaacctgagatgaaca |
230 |
Q |
| |
|
| || ||||||||| || | ||||| || || ||||||||||| ||| |||||| || || | ||| ||||||||||| |||||||||||||||| |
|
|
| T |
45211007 |
gaatcaataaccatatgcaaactttggtgaattgcggttagctcggcttgcaatatgtccgtcgaattcgggatgaaaccggaaaaacctgagatgaaca |
45211106 |
T |
|
| Q |
231 |
aacctg |
236 |
Q |
| |
|
| |||| |
|
|
| T |
45211107 |
agcctg |
45211112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University