View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10740_high_16 (Length: 251)
Name: NF10740_high_16
Description: NF10740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10740_high_16 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 2286693 - 2286452
Alignment:
| Q |
14 |
gaaaacaactgttctattctaatgtcagacatcactttaatttgaatttatgctgcatatgcatatgtactagtagctccaataaaagtttaatagtatg |
113 |
Q |
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| T |
2286693 |
gaaaacaactgttctattctaatgtcagacatcactttaatttgaatttatgctgcatatgcatatgtactagtagctccaataaaagtttaatagtatg |
2286594 |
T |
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| Q |
114 |
gttaattgtatttcattaat----atatgatcgtaacgttctacctacctgctctggtcctgtgtatatatacattaatatacaaccacaccattggttt |
209 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2286593 |
gttaattgtatttcattaattaatatatgatcgtaacgttctacctacctgctctggtcctgtgtatatatacattaatatacaaccacaccattggttt |
2286494 |
T |
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| Q |
210 |
tagtgtctgatatctatatctatatctatataagcataaaca |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
2286493 |
tagtgtctgatatctatatctatatctatataagcataaaca |
2286452 |
T |
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