View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10740_low_21 (Length: 250)
Name: NF10740_low_21
Description: NF10740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10740_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12345029 - 12345273
Alignment:
| Q |
1 |
tactattaaataattttttcattgttaaattctttagtcagattgaagatggtacgattctgattgggatttaatgatgtttaaatttatatgctacatt |
100 |
Q |
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| T |
12345029 |
tactattaaataaatttttcattgttaaattctttagtcagattgaagatggtacgattctgattgggatttaatgatgtttaaatttatatgctacatt |
12345128 |
T |
|
| Q |
101 |
attattaaatacacatacattagaggaagcaattaagggatgaatattaatttcaaattccaatggtttccttagaaagggtttctctcaatcaaatact |
200 |
Q |
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| T |
12345129 |
attattaaatacacatacattagaggaagcaattaagtgatgaatattaatttcaaattccaatggtttccttagaaagggtttctctcaatcaaatact |
12345228 |
T |
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| Q |
201 |
ttgtgcttcttttttctattagatctgctgcctctctctgcttct |
245 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
12345229 |
ttgtgcttcttttttctattagatctgctgcctctccctgcttct |
12345273 |
T |
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