View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10741_high_38 (Length: 214)
Name: NF10741_high_38
Description: NF10741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10741_high_38 |
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Alignment Details
Target: chr7 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 777137 - 777051
Alignment:
| Q |
114 |
tttgttttatgtttatgatcaagcaatcaaaatatgtaaattggtcatttgtaactatgaaatcatatggcgaacatttaaattcta |
200 |
Q |
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| T |
777137 |
tttgttttatgtttatgatcaagcaatcaaaatatgtaaattggtcatttgtaactatgaaatcatatggcgaacatttaaattcta |
777051 |
T |
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Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 8458291 - 8458372
Alignment:
| Q |
114 |
tttgttttatgtttatgatcaagcaatcaaaatatgtaaattggtcatttgtaactatgaaatcatatggcgaacatttaaa |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8458291 |
tttgttttatgtttatgatcaagcaatcaaaatatgtaaattggtcatttgtaactatgaaatcatatggcgaacatttaaa |
8458372 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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