View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10741_low_16 (Length: 310)
Name: NF10741_low_16
Description: NF10741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10741_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 292
Target Start/End: Complemental strand, 41859111 - 41858845
Alignment:
| Q |
18 |
agggaaagataagagtagaagaataattagaagagtatcttgtgaaggaaataccatggtgtctttgttaactcattgcattttacagctactagttata |
117 |
Q |
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| T |
41859111 |
agggaaagataagagtaggagaataattagaagagtatcttgtgaaggaaataccatggtttctttgttaactcgttgcattttgcagctactagttata |
41859012 |
T |
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| Q |
118 |
tttcatcttttatcaccaggctataaacgaatacatgtttgatgcacatatataatcaaattcttttaattcaattttgaaacaaatnnnnnnnttgtcc |
217 |
Q |
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| T |
41859011 |
tttcatcttttatcaccaggctataaatgaa-acatg-------cacatatataatcaaattcttttaattcaattttgaaacaaataaaaaaattgtcc |
41858920 |
T |
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| Q |
218 |
cacaaaagttaaacttgttatttttaaaataggaatcttgtttttattttactaaaacatagcagtaggaatctt |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41858919 |
cacaaaagttaaacttgttatttttaaaataggaatcttgtttttattttactaaaacatagcagtaggaatctt |
41858845 |
T |
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