View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10741_low_43 (Length: 238)
Name: NF10741_low_43
Description: NF10741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10741_low_43 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18725263 - 18725488
Alignment:
| Q |
1 |
attttgttcttgatttgcagcactcgatcaaaagaacaatggaacctctgtgatactgatgatattgtggagtatttagatcgaagtgcagaaatcattg |
100 |
Q |
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| T |
18725263 |
attttgttcttgatttgcagcactcgatcgaaagaacaatggaacctctgtgatactgatgatattgtggagtatttggatcgaagtgcagaaatcattg |
18725362 |
T |
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| Q |
101 |
cctttggcagggatatttactgagtcggaaaagagttgcaactttcgagagagacgcattagcagagttccggtccggtgggcatgcaggaatacaaaat |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18725363 |
cctttggcagggatatttaatgagtcggaaaagagttgcaactttcgagagagacgcattagcagagttccggtccggtgggcatgcaggaatacaaaat |
18725462 |
T |
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| Q |
201 |
tgcagcaagtagaaagcataaatgat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
18725463 |
tgcagcaagtagaaagcataaatgat |
18725488 |
T |
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