View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10741_low_44 (Length: 236)
Name: NF10741_low_44
Description: NF10741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10741_low_44 |
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Alignment Details
Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 26616355 - 26616151
Alignment:
| Q |
16 |
ctgtgtgtcatacattgttgcctgtactcataataaattacaaattattaattaacctaatactnnnnnnnnnttagtactaattttgtatgatcttaaa |
115 |
Q |
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| T |
26616355 |
ctgtgggttatacattgttgcctgtactcataataaattacaaattattaattaacctaatactaaaaaaaaattagtactaattttgtatgatcttaaa |
26616256 |
T |
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| Q |
116 |
tgattatgggagggaaatgcttacttgagggtacccgtattcaggagtgtaggtagggtagctgcnnnnnnnngttgaaaggaattaaattagaaagcaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
26616255 |
tgattatgggagggaaatgcttacttgagggtacccgtattcaggagtgtaggtagggtagctgcaaaaaaaagttgaaaggaattaaattagaaagcaa |
26616156 |
T |
|
| Q |
216 |
aaaag |
220 |
Q |
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||||| |
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| T |
26616155 |
aaaag |
26616151 |
T |
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