View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10741_low_57 (Length: 217)
Name: NF10741_low_57
Description: NF10741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10741_low_57 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9299097 - 9298881
Alignment:
| Q |
1 |
tcgattggatgaatcactgagacaatttccaaggttcattagaaatagcagcatagcaagttttgttaatatcagtgacatgttgaagggattcttagaa |
100 |
Q |
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| T |
9299097 |
tcgattggatgaatcactgagacaatttccaaggttcattagaaatagcagcatagcaagttttgttaatatcagtgacatgttgaagggattcttagaa |
9298998 |
T |
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| Q |
101 |
ctttaaactggtataatttaatatatagagcaagagagggataaagtagacagaagatgatataaagaaacataattgtatctatctctatgctattaag |
200 |
Q |
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| T |
9298997 |
ctttaaactggtataatttaatatatagagcaagagagggataaagtagaaagaagatgatataaagaaacataattgtatctatctctatgctattaaa |
9298898 |
T |
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| Q |
201 |
aatgaaaataatatgct |
217 |
Q |
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||||||||||||||||| |
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| T |
9298897 |
aatgaaaataatatgct |
9298881 |
T |
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