View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10742_high_15 (Length: 255)

Name: NF10742_high_15
Description: NF10742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10742_high_15
NF10742_high_15
[»] chr6 (49 HSPs)
chr6 (1-150)||(3403774-3403929)
chr6 (1-150)||(18241940-18242096)
chr6 (89-162)||(10039846-10039920)
chr6 (89-150)||(2762597-2762658)
chr6 (89-149)||(30388243-30388303)
chr6 (12-74)||(33972089-33972151)
chr6 (12-150)||(11656594-11656739)
chr6 (190-255)||(33972249-33972315)
chr6 (89-146)||(33972192-33972249)
chr6 (89-150)||(13579531-13579592)
chr6 (155-201)||(30388061-30388108)
chr6 (143-201)||(3403716-3403777)
chr6 (155-200)||(10039676-10039722)
chr6 (21-71)||(13579457-13579507)
chr6 (1-63)||(30388146-30388208)
chr6 (1-71)||(31598542-31598612)
chr6 (1-71)||(33658639-33658708)
chr6 (155-200)||(3403996-3404043)
chr6 (155-205)||(21031974-21032025)
chr6 (12-71)||(31598069-31598128)
chr6 (89-144)||(33658560-33658615)
chr6 (201-251)||(2814590-2814640)
chr6 (201-251)||(7537884-7537934)
chr6 (12-66)||(21032182-21032236)
chr6 (1-42)||(10039760-10039801)
chr6 (155-200)||(18241854-18241901)
chr6 (155-200)||(21032287-21032334)
chr6 (155-187)||(30388369-30388401)
chr6 (89-136)||(3403722-3403768)
chr6 (89-136)||(3403992-3404038)
chr6 (155-197)||(3825530-3825573)
chr6 (89-144)||(21032097-21032152)
chr6 (93-136)||(31598157-31598200)
chr6 (93-136)||(31598641-31598684)
chr6 (155-197)||(31598735-31598778)
chr6 (12-66)||(2762691-2762745)
chr6 (201-251)||(2949570-2949620)
chr6 (201-251)||(3289189-3289239)
chr6 (201-251)||(6220113-6220163)
chr6 (201-251)||(6220335-6220385)
chr6 (90-136)||(12714436-12714481)
chr6 (155-200)||(13579658-13579704)
chr6 (16-54)||(23250692-23250730)
chr6 (201-255)||(29999678-29999732)
chr6 (155-200)||(33655122-33655168)
chr6 (155-201)||(11656789-11656837)
chr6 (155-201)||(33828989-33829037)
chr6 (155-187)||(31598280-31598312)
chr6 (155-200)||(33829643-33829690)
[»] chr2 (63 HSPs)
chr2 (1-150)||(11883737-11883894)
chr2 (1-150)||(32672928-32673083)
chr2 (1-150)||(6171241-6171397)
chr2 (1-150)||(40469513-40469669)
chr2 (1-149)||(30191038-30191193)
chr2 (89-162)||(40221491-40221565)
chr2 (89-150)||(20347343-20347404)
chr2 (89-150)||(26737659-26737721)
chr2 (93-150)||(15920918-15920975)
chr2 (93-154)||(17345841-17345902)
chr2 (12-71)||(17345933-17345992)
chr2 (201-251)||(39454712-39454762)
chr2 (155-201)||(11883933-11883981)
chr2 (1-66)||(20347248-20347313)
chr2 (143-200)||(24832331-24832391)
chr2 (155-200)||(26737482-26737527)
chr2 (1-66)||(26737565-26737629)
chr2 (155-200)||(11883623-11883670)
chr2 (1-61)||(40221397-40221457)
chr2 (155-201)||(6171155-6171202)
chr2 (155-201)||(40221312-40221359)
chr2 (155-201)||(43495612-43495659)
chr2 (155-197)||(40469736-40469780)
chr2 (12-48)||(15321610-15321646)
chr2 (155-203)||(17345730-17345778)
chr2 (155-200)||(20347471-20347518)
chr2 (155-200)||(30190923-30190970)
chr2 (203-251)||(32503605-32503653)
chr2 (89-136)||(11883628-11883674)
chr2 (89-136)||(11883929-11883975)
chr2 (155-198)||(15321394-15321437)
chr2 (89-144)||(18055163-18055218)
chr2 (89-136)||(24832336-24832382)
chr2 (89-136)||(40469732-40469778)
chr2 (12-47)||(43495404-43495439)
chr2 (89-144)||(43495487-43495541)
chr2 (201-251)||(5921665-5921715)
chr2 (201-251)||(5961726-5961776)
chr2 (94-144)||(6495541-6495591)
chr2 (155-197)||(19141856-19141898)
chr2 (201-251)||(28631553-28631603)
chr2 (201-251)||(35408800-35408850)
chr2 (201-251)||(40694454-40694504)
chr2 (201-251)||(41377633-41377683)
chr2 (201-251)||(41659802-41659852)
chr2 (201-251)||(43183640-43183690)
chr2 (201-251)||(43183862-43183912)
chr2 (193-251)||(44612540-44612598)
chr2 (201-254)||(17856465-17856518)
chr2 (143-200)||(18296687-18296747)
chr2 (155-201)||(26737788-26737836)
chr2 (155-201)||(30191232-30191280)
chr2 (155-200)||(2639489-2639536)
chr2 (155-200)||(6171463-6171510)
chr2 (203-255)||(16350346-16350398)
chr2 (203-251)||(16655885-16655933)
chr2 (155-198)||(18055050-18055093)
chr2 (155-200)||(26841587-26841634)
chr2 (203-251)||(31450725-31450773)
chr2 (203-251)||(34820558-34820606)
chr2 (203-251)||(36211620-36211668)
chr2 (155-200)||(41790919-41790966)
chr2 (155-200)||(43495309-43495356)
[»] chr8 (73 HSPs)
chr8 (2-150)||(37752228-37752384)
chr8 (1-150)||(12281238-12281394)
chr8 (89-150)||(15156064-15156125)
chr8 (1-150)||(43162321-43162477)
chr8 (89-150)||(43245985-43246046)
chr8 (89-149)||(18019902-18019962)
chr8 (89-148)||(9465688-9465747)
chr8 (11-149)||(34313858-34314003)
chr8 (93-148)||(41662286-41662341)
chr8 (1-71)||(16929141-16929211)
chr8 (89-150)||(765848-765909)
chr8 (89-149)||(33748163-33748225)
chr8 (89-150)||(7127830-7127891)
chr8 (12-61)||(9465782-9465831)
chr8 (89-150)||(16929054-16929114)
chr8 (1-66)||(43246078-43246143)
chr8 (89-149)||(74864-74924)
chr8 (1-61)||(15155969-15156029)
chr8 (155-198)||(23123524-23123567)
chr8 (12-71)||(37670050-37670109)
chr8 (1-71)||(7127735-7127805)
chr8 (12-66)||(33748080-33748134)
chr8 (155-201)||(34313764-34313810)
chr8 (1-66)||(765939-766003)
chr8 (97-146)||(43597908-43597957)
chr8 (155-200)||(16928942-16928989)
chr8 (16-64)||(23123441-23123489)
chr8 (93-144)||(11007651-11007702)
chr8 (201-251)||(14920690-14920740)
chr8 (201-251)||(23244572-23244622)
chr8 (201-251)||(30650247-30650297)
chr8 (143-201)||(37752083-37752144)
chr8 (155-200)||(6092777-6092822)
chr8 (16-61)||(9930746-9930791)
chr8 (155-201)||(16929249-16929297)
chr8 (1-66)||(18019992-18020057)
chr8 (155-200)||(18020095-18020140)
chr8 (12-61)||(22787021-22787069)
chr8 (89-150)||(37670134-37670195)
chr8 (155-201)||(37752423-37752471)
chr8 (155-201)||(41662410-41662458)
chr8 (155-201)||(43245870-43245918)
chr8 (201-254)||(44254922-44254975)
chr8 (12-48)||(74780-74816)
chr8 (15-71)||(3463739-3463795)
chr8 (155-187)||(7127667-7127699)
chr8 (155-200)||(12281124-12281171)
chr8 (155-200)||(15155883-15155930)
chr8 (155-200)||(43246183-43246230)
chr8 (201-252)||(18623667-18623718)
chr8 (89-144)||(22786930-22786985)
chr8 (155-201)||(43162233-43162280)
chr8 (155-198)||(765736-765781)
chr8 (201-251)||(1826070-1826120)
chr8 (201-251)||(1860515-1860565)
chr8 (158-201)||(3463955-3464000)
chr8 (155-200)||(13936723-13936769)
chr8 (201-251)||(18914530-18914580)
chr8 (201-251)||(31230670-31230720)
chr8 (201-255)||(39912194-39912248)
chr8 (28-66)||(41662214-41662252)
chr8 (155-200)||(3463642-3463687)
chr8 (201-251)||(6843552-6843604)
chr8 (155-201)||(12281433-12281481)
chr8 (155-201)||(15156192-15156240)
chr8 (202-251)||(30568555-30568604)
chr8 (155-201)||(39724055-39724103)
chr8 (155-198)||(74688-74732)
chr8 (92-144)||(3463826-3463877)
chr8 (155-200)||(9823368-9823415)
chr8 (155-200)||(13026635-13026682)
chr8 (155-200)||(41662107-41662154)
chr8 (155-183)||(43598762-43598790)
[»] scaffold0319 (4 HSPs)
scaffold0319 (1-150)||(6481-6637)
scaffold0319 (155-202)||(6704-6752)
scaffold0319 (155-200)||(6394-6441)
scaffold0319 (89-136)||(6399-6445)
[»] scaffold0192 (3 HSPs)
scaffold0192 (1-150)||(25153-25309)
scaffold0192 (155-200)||(25376-25423)
scaffold0192 (89-136)||(25372-25418)
[»] chr5 (43 HSPs)
chr5 (1-150)||(18433129-18433285)
chr5 (1-150)||(26020564-26020719)
chr5 (1-150)||(34576979-34577133)
chr5 (1-150)||(25115871-25116027)
chr5 (1-150)||(25174963-25175119)
chr5 (92-149)||(5187637-5187694)
chr5 (12-145)||(5779658-5779797)
chr5 (156-201)||(12441320-12441365)
chr5 (90-149)||(9665641-9665700)
chr5 (143-200)||(22428934-22428993)
chr5 (12-71)||(22429028-22429086)
chr5 (1-71)||(12441098-12441168)
chr5 (143-201)||(18433014-18433075)
chr5 (92-145)||(12441196-12441249)
chr5 (143-197)||(34576870-34576926)
chr5 (143-197)||(9665560-9665615)
chr5 (143-200)||(22429190-22429249)
chr5 (201-251)||(7399357-7399407)
chr5 (89-143)||(9869741-9869795)
chr5 (90-144)||(23011261-23011315)
chr5 (201-251)||(31656637-31656687)
chr5 (143-200)||(26020450-26020510)
chr5 (143-202)||(34577158-34577219)
chr5 (203-251)||(10656373-10656421)
chr5 (155-200)||(16466749-16466796)
chr5 (155-200)||(18433323-18433370)
chr5 (155-200)||(25116068-25116115)
chr5 (155-200)||(25175158-25175205)
chr5 (12-71)||(9665726-9665785)
chr5 (12-71)||(9869655-9869714)
chr5 (89-136)||(18433020-18433066)
chr5 (155-201)||(23011078-23011125)
chr5 (201-251)||(5152894-5152944)
chr5 (201-251)||(7210513-7210563)
chr5 (201-251)||(12593735-12593785)
chr5 (89-135)||(16726084-16726129)
chr5 (2-48)||(23011167-23011213)
chr5 (201-251)||(36751959-36752009)
chr5 (155-200)||(41383174-41383220)
chr5 (161-201)||(9665839-9665880)
chr5 (155-201)||(18817618-18817666)
chr5 (155-200)||(25115757-25115804)
chr5 (155-200)||(25174849-25174896)
[»] chr7 (60 HSPs)
chr7 (1-158)||(13772698-13772863)
chr7 (1-150)||(9412109-9412265)
chr7 (12-150)||(6908309-6908454)
chr7 (1-150)||(3687441-3687597)
chr7 (90-150)||(15567169-15567229)
chr7 (89-150)||(5349641-5349702)
chr7 (89-150)||(33628492-33628553)
chr7 (24-71)||(33628586-33628633)
chr7 (90-149)||(35080132-35080191)
chr7 (1-71)||(5349546-5349616)
chr7 (12-66)||(27096245-27096299)
chr7 (12-66)||(27182004-27182058)
chr7 (143-203)||(5349727-5349787)
chr7 (89-150)||(34235858-34235919)
chr7 (1-61)||(15567075-15567135)
chr7 (155-200)||(23686724-23686771)
chr7 (2-66)||(38191464-38191528)
chr7 (89-136)||(18925232-18925279)
chr7 (155-201)||(27096046-27096093)
chr7 (155-201)||(27182210-27182257)
chr7 (12-71)||(29291903-29291962)
chr7 (155-201)||(3204668-3204714)
chr7 (2-52)||(18925143-18925193)
chr7 (90-136)||(27096170-27096216)
chr7 (90-136)||(27182087-27182133)
chr7 (201-251)||(34568863-34568913)
chr7 (155-201)||(3687663-3687711)
chr7 (155-201)||(13772908-13772956)
chr7 (155-200)||(9412332-9412379)
chr7 (155-199)||(18925329-18925373)
chr7 (162-201)||(35079959-35079999)
chr7 (155-201)||(3687352-3687401)
chr7 (89-144)||(5735372-5735427)
chr7 (155-197)||(6908491-6908534)
chr7 (163-201)||(23686420-23686459)
chr7 (12-71)||(34235775-34235834)
chr7 (17-60)||(35080051-35080094)
chr7 (89-136)||(38191388-38191434)
chr7 (201-255)||(5238508-5238562)
chr7 (16-58)||(5735458-5735500)
chr7 (155-200)||(6908213-6908259)
chr7 (201-251)||(8769561-8769611)
chr7 (201-251)||(9230733-9230783)
chr7 (12-42)||(23686646-23686676)
chr7 (201-251)||(31715900-31715950)
chr7 (201-255)||(32706789-32706843)
chr7 (201-251)||(43726301-43726350)
chr7 (201-251)||(43726521-43726571)
chr7 (155-199)||(8953896-8953941)
chr7 (143-200)||(13772641-13772701)
chr7 (155-201)||(18925061-18925109)
chr7 (155-201)||(44599488-44599536)
chr7 (89-145)||(8953717-8953773)
chr7 (155-204)||(9035300-9035351)
chr7 (155-200)||(9412023-9412070)
chr7 (203-251)||(10625363-10625411)
chr7 (147-200)||(13863955-13864010)
chr7 (92-136)||(23686723-23686766)
chr7 (203-251)||(31623703-31623751)
chr7 (155-200)||(44600142-44600189)
[»] chr4 (48 HSPs)
chr4 (1-150)||(16555601-16555757)
chr4 (1-150)||(11241474-11241630)
chr4 (16-150)||(5206060-5206199)
chr4 (1-150)||(3930264-3930420)
chr4 (1-150)||(22681693-22681849)
chr4 (1-147)||(8488301-8488451)
chr4 (12-150)||(27304813-27304957)
chr4 (89-148)||(35393592-35393651)
chr4 (89-149)||(13198719-13198779)
chr4 (89-144)||(49178636-49178691)
chr4 (1-53)||(39415310-39415362)
chr4 (1-64)||(35393682-35393745)
chr4 (155-200)||(3930487-3930533)
chr4 (13-66)||(13198809-13198862)
chr4 (89-136)||(8181996-8182043)
chr4 (1-71)||(7603200-7603270)
chr4 (143-201)||(16555811-16555872)
chr4 (155-201)||(27304717-27304763)
chr4 (201-255)||(44710678-44710732)
chr4 (12-66)||(49178719-49178772)
chr4 (155-200)||(23539841-23539886)
chr4 (92-149)||(24775633-24775690)
chr4 (89-145)||(7603296-7603352)
chr4 (155-200)||(13198913-13198960)
chr4 (155-200)||(56505693-56505740)
chr4 (12-47)||(8182092-8182127)
chr4 (89-136)||(8182175-8182222)
chr4 (89-136)||(16555820-16555866)
chr4 (201-251)||(21218126-21218176)
chr4 (201-251)||(25218141-25218191)
chr4 (201-251)||(34959110-34959160)
chr4 (159-200)||(35393787-35393829)
chr4 (201-251)||(45911636-45911686)
chr4 (201-251)||(46200541-46200591)
chr4 (201-251)||(52915009-52915059)
chr4 (12-41)||(3844411-3844440)
chr4 (155-199)||(22681576-22681621)
chr4 (89-136)||(5206233-5206278)
chr4 (155-199)||(7603146-7603190)
chr4 (155-200)||(16555515-16555562)
chr4 (155-200)||(18077209-18077256)
chr4 (203-251)||(33626143-33626191)
chr4 (203-251)||(44428630-44428678)
chr4 (203-251)||(44432903-44432951)
chr4 (203-251)||(45683176-45683224)
chr4 (203-251)||(46621206-46621254)
chr4 (155-200)||(50678779-50678826)
chr4 (155-187)||(54509122-54509154)
[»] chr3 (55 HSPs)
chr3 (1-150)||(10293721-10293877)
chr3 (12-147)||(9026849-9026991)
chr3 (1-150)||(20968804-20968960)
chr3 (89-150)||(18875003-18875064)
chr3 (89-201)||(3644723-3644838)
chr3 (89-145)||(4947377-4947433)
chr3 (89-145)||(45060775-45060830)
chr3 (12-71)||(3644629-3644688)
chr3 (89-144)||(13657624-13657679)
chr3 (12-66)||(18875094-18875148)
chr3 (155-200)||(47871129-47871175)
chr3 (89-145)||(1101093-1101148)
chr3 (155-204)||(17372294-17372345)
chr3 (89-144)||(17372476-17372531)
chr3 (157-200)||(17440763-17440806)
chr3 (201-251)||(27254041-27254091)
chr3 (201-251)||(29248376-29248426)
chr3 (201-251)||(54081563-54081613)
chr3 (155-201)||(10293916-10293964)
chr3 (89-141)||(14015873-14015926)
chr3 (89-138)||(18874885-18874933)
chr3 (155-201)||(20969026-20969074)
chr3 (12-61)||(26540777-26540826)
chr3 (155-188)||(26540876-26540909)
chr3 (2-71)||(45060682-45060751)
chr3 (12-48)||(13657543-13657579)
chr3 (155-199)||(17372601-17372645)
chr3 (92-144)||(17440877-17440929)
chr3 (155-187)||(18874897-18874929)
chr3 (155-200)||(18875198-18875245)
chr3 (16-52)||(42627463-42627499)
chr3 (155-202)||(42627553-42627601)
chr3 (155-200)||(45060878-45060925)
chr3 (155-201)||(9027040-9027087)
chr3 (89-136)||(18875194-18875240)
chr3 (12-71)||(47870917-47870976)
chr3 (201-251)||(4846875-4846925)
chr3 (201-251)||(7743044-7743094)
chr3 (201-251)||(34521323-34521373)
chr3 (201-251)||(40410769-40410819)
chr3 (201-251)||(41208679-41208729)
chr3 (201-251)||(43899168-43899218)
chr3 (155-202)||(45060594-45060643)
chr3 (201-251)||(52606185-52606235)
chr3 (201-251)||(52609641-52609691)
chr3 (201-251)||(53841305-53841355)
chr3 (155-205)||(20968713-20968765)
chr3 (91-136)||(47871005-47871049)
chr3 (1-49)||(1100997-1101045)
chr3 (203-251)||(10756777-10756825)
chr3 (16-48)||(14015795-14015827)
chr3 (143-197)||(14015958-14016014)
chr3 (16-71)||(17372398-17372454)
chr3 (155-202)||(42672976-42673024)
chr3 (147-201)||(53688301-53688357)
[»] chr1 (48 HSPs)
chr1 (1-150)||(22149486-22149642)
chr1 (1-150)||(8108806-8108962)
chr1 (1-150)||(17518388-17518544)
chr1 (2-150)||(41083022-41083177)
chr1 (1-149)||(47955421-47955576)
chr1 (155-199)||(46056904-46056948)
chr1 (155-205)||(1176712-1176763)
chr1 (155-200)||(13589666-13589712)
chr1 (90-144)||(31848013-31848067)
chr1 (89-144)||(46057013-46057068)
chr1 (201-251)||(5463397-5463447)
chr1 (201-251)||(23281289-23281339)
chr1 (1-71)||(31848092-31848162)
chr1 (201-251)||(50574796-50574846)
chr1 (201-251)||(51810417-51810467)
chr1 (201-251)||(52412877-52412927)
chr1 (143-200)||(8108987-8109047)
chr1 (155-197)||(22149706-22149750)
chr1 (155-198)||(17518609-17518653)
chr1 (12-71)||(46057092-46057152)
chr1 (155-200)||(47955306-47955353)
chr1 (89-136)||(22149702-22149748)
chr1 (1-47)||(1176934-1176980)
chr1 (201-251)||(6181895-6181945)
chr1 (201-251)||(16267772-16267822)
chr1 (155-200)||(17518303-17518349)
chr1 (201-251)||(22584408-22584458)
chr1 (201-251)||(22584631-22584681)
chr1 (201-251)||(32517662-32517712)
chr1 (201-251)||(32564016-32564066)
chr1 (201-255)||(33753491-33753545)
chr1 (201-251)||(34279520-34279570)
chr1 (201-251)||(36884983-36885033)
chr1 (201-251)||(37198989-37199039)
chr1 (155-202)||(41082907-41082956)
chr1 (155-200)||(41083218-41083264)
chr1 (155-201)||(47498300-47498346)
chr1 (143-201)||(48190770-48190831)
chr1 (201-251)||(49291050-49291100)
chr1 (201-251)||(49291262-49291312)
chr1 (201-251)||(50574571-50574621)
chr1 (201-254)||(50921117-50921170)
chr1 (203-251)||(10654308-10654356)
chr1 (201-249)||(11394941-11394989)
chr1 (203-251)||(25088075-25088123)
chr1 (155-200)||(44911025-44911072)
chr1 (155-200)||(47955615-47955662)
chr1 (155-200)||(49284409-49284456)
[»] scaffold0001 (8 HSPs)
scaffold0001 (1-162)||(438999-439169)
scaffold0001 (12-66)||(183460-183514)
scaffold0001 (90-144)||(183544-183598)
scaffold0001 (155-201)||(438929-438977)
scaffold0001 (155-200)||(439206-439253)
scaffold0001 (156-200)||(183670-183716)
scaffold0001 (89-136)||(438935-438981)
scaffold0001 (90-136)||(439203-439248)
[»] scaffold0802 (4 HSPs)
scaffold0802 (89-150)||(1299-1360)
scaffold0802 (12-66)||(1215-1269)
scaffold0802 (155-201)||(1117-1165)
scaffold0802 (155-201)||(1427-1475)
[»] scaffold0110 (4 HSPs)
scaffold0110 (89-149)||(45686-45746)
scaffold0110 (1-71)||(45622-45692)
scaffold0110 (143-200)||(45537-45596)
scaffold0110 (155-200)||(45814-45860)
[»] scaffold1221 (3 HSPs)
scaffold1221 (89-150)||(1595-1656)
scaffold1221 (1-66)||(1686-1751)
scaffold1221 (155-202)||(1791-1839)
[»] scaffold0002 (2 HSPs)
scaffold0002 (95-148)||(412037-412090)
scaffold0002 (155-200)||(411923-411969)
[»] scaffold0015 (4 HSPs)
scaffold0015 (12-62)||(17062-17112)
scaffold0015 (89-154)||(16963-17028)
scaffold0015 (155-210)||(17163-17219)
scaffold0015 (157-201)||(16852-16896)
[»] scaffold0598 (2 HSPs)
scaffold0598 (89-150)||(6754-6815)
scaffold0598 (1-71)||(6690-6760)
[»] scaffold0376 (3 HSPs)
scaffold0376 (155-202)||(7607-7655)
scaffold0376 (155-200)||(7455-7501)
scaffold0376 (12-42)||(7522-7552)
[»] scaffold0535 (1 HSPs)
scaffold0535 (155-207)||(10005-10059)
[»] scaffold0236 (1 HSPs)
scaffold0236 (201-251)||(11270-11320)
[»] scaffold0009 (2 HSPs)
scaffold0009 (155-200)||(205687-205733)
scaffold0009 (12-61)||(205781-205830)
[»] scaffold0433 (1 HSPs)
scaffold0433 (12-41)||(10720-10749)
[»] scaffold0328 (1 HSPs)
scaffold0328 (155-201)||(6151-6199)
[»] scaffold0444 (1 HSPs)
scaffold0444 (203-251)||(11727-11775)
[»] scaffold0035 (1 HSPs)
scaffold0035 (89-141)||(73086-73138)


Alignment Details
Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3403774 - 3403929
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn-----gtgcaa 94  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||               ||||||    
T  3403774 cttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaagaagagaaggtgcaa 3403873  T
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3403874 aatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 3403929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 18241940 - 18242096
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| |||          |||      ||    
T  18241940 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 18242039  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  18242040 aaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 18242096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 10039846 - 10039920
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg-aaaatcgc 162  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  10039846 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcgc 10039920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 2762658 - 2762597
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2762658 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatgg 2762597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 30388243 - 30388303
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30388243 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatg 30388303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 33972089 - 33972151
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaatcg 74  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  33972089 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggataaagatagggtgcaaatcg 33972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 11656739 - 11656594
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn------gtgcaaaatcgcacaa 104  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||  |||                ||||||||||||||||    
T  11656739 tgtgttttgttcaaaatcatcaataaaagagaggtaaaggggctaaagatagggtgcaaaatcactcaaaaaaaagaatagggggtgcaaaatcgcacaa 11656640  T
Q  105 ttagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||| ||||| |||| |||||||||||||||||||||||||||||||    
T  11656639 ttatcaaaacgatagggggcaaaagtgcaattgaacacaaagatgg 11656594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 33972249 - 33972315
Alignment:
Q  190 gcaattaagccattaaaatttgatttatttttgttcc-ataatttctctctgttacacattttagtc 255  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  33972249 gcaattaagccattaaaattcgatttattttttttcccataatttctctctgttacacattttagtc 33972315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 33972192 - 33972249
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaag 146  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  33972192 gtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaag 33972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 13579531 - 13579592
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  13579531 gtgcagaattgcacaattagcaaaaatatagggggcaaaagtgcaattgaacacaaatatgg 13579592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 30388108 - 30388061
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaagcca 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  30388108 aaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcca 30388061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 3403777 - 3403716
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  3403777 aaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcca 3403716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 10039722 - 10039676
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  10039722 aaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 10039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 13579457 - 13579507
Alignment:
Q  21 ttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  13579457 ttcaaaatcatcattaaaagagaggaaaagggtctaaagacagggtgcaaa 13579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30388146 - 30388208
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatag 63  Q
    |||||||||  | |||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  30388146 cttttgtcaattatgttttgttcaaaatcatcaataaaagagagaaaaagggactaaagatag 30388208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31598542 - 31598612
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  ||||||||||||||||||||||||||||||| || |||||| | |||||| |||| ||||    
T  31598542 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagggggaaagggacaaaagatggggtgcaaa 31598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33658708 - 33658639
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  ||||||||||||||||||||||||||||||| || |||||||| ||| ||||||| ||||    
T  33658708 cttttgtcaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaaaatagggtgcaaa 33658639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 3403996 - 3404043
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  3403996 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 21032025 - 21031974
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccattaa 205  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  21032025 aaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcctttaa 21031974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 31598069 - 31598128
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||||||||||||| || |||||| | |||||| |||| ||||    
T  31598069 tgtgttttgttcaaaatcatcattaaaagagggggaaagggacaaaagatggggtgcaaa 31598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 33658615 - 33658560
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||| |||||||| |||||||||||  |||||||||||||||| |||||||    
T  33658615 gtgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaattaaacacaa 33658560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 2814640 - 2814590
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||| | ||| ||||||||||||||||||||    
T  2814640 attaaaatttgatttattttggtttcttaacttctctctgttacacatttt 2814590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7537934 - 7537884
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || |||||| ||||||| ||||||||||||    
T  7537934 attaaaatttgatttattttggtcccataacttctctcggttacacatttt 7537884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 21032236 - 21032182
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  |||||| ||||    
T  21032236 tgtgttttgttcaaaatcatcattaaaagaggggaaagggggtaaaagatggggt 21032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10039760 - 10039801
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagag 42  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  10039760 cttttgtcagttgtgttttgttcaaaatcatcattaaaagag 10039801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 18241901 - 18241854
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  18241901 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18241854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 21032287 - 21032334
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  21032287 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 21032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 30388369 - 30388401
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa 187  Q
    |||||||||||||||||||||||||||||||||    
T  30388369 aaaatcgcacaattagcaaaagatagggggaaa 30388401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 3403768 - 3403722
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  3403768 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 3403722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 3403992 - 3404038
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  3403992 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 3404038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 3825573 - 3825530
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaa 197  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  3825573 aaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 21032152 - 21032097
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||||||  ||| |||||| ||||||||||||||| | |||||||    
T  21032152 gtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaactaaacacaa 21032097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 31598157 - 31598200
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  31598157 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 31598641 - 31598684
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  31598641 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 31598735 - 31598778
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaa 197  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
T  31598735 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 2762745 - 2762691
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||| ||||||||||||||||||| || |||||| | || |||||||||||    
T  2762745 tgtgttttattcaaaatcatcattaaaaaaggggaaaatgagcaaaagatagggt 2762691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 2949620 - 2949570
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||||||||||    
T  2949620 attaaaatttgatttattttggtctcttaacttctctctgttacacatttt 2949570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 3289239 - 3289189
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  3289239 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 3289189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 6220113 - 6220163
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||| ||||||||||||||    
T  6220113 attaaaatttgatttattttggtcccttaacttctccctgttacacatttt 6220163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 6220385 - 6220335
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  6220385 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 6220335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaa-gatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 13579658 - 13579704
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg-ggaaagtgcaattaagcc 200  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  13579658 aaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcc 13579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 23250692 - 23250730
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggggc 54  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  23250692 ttttgttcaaaatcatcattaaaagaggggaaagggggc 23250730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 29999732 - 29999678
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    |||||||||||||||||||| ||  | ||| |||| |||||||||||||||||||    
T  29999732 attaaaatttgatttattttggtatcttaacttctatctgttacacattttagtc 29999678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 33655122 - 33655168
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggga-aagtgcaattaagcc 200  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  33655122 aaaattgcacaattagcaaaagataaggggacaagtgcaattaagcc 33655168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 11656789 - 11656837
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag--ggggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||||  | | |||||||||||||||||    
T  11656789 aaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcca 11656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 33829037 - 33828989
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  33829037 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcca 33828989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 31598280 - 31598312
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa 187  Q
    |||||||||||||||||||||||||| ||||||    
T  31598280 aaaatcgcacaattagcaaaagatagagggaaa 31598312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 33829643 - 33829690
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  33829643 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11883894 - 11883737
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc-------acnnnnnnnnngtgc 92  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||       |          ||||    
T  11883894 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaaagaagagaaggtgc 11883795  T
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11883794 aaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 11883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 32672928 - 32673083
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaatcggtcacnnnnnnnnngtg------caa 94  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  | |||          |||      |||    
T  32672928 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatgctcaaaaaatataagtgagggtgcaa 32673027  T
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32673028 aatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 32673083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6171241 - 6171397
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| |||          |||      ||    
T  6171241 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 6171340  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  6171341 aaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 6171397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 40469513 - 40469669
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc------acnnnnnnnnngtgca 93  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||      |          |||||    
T  40469513 cttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgca 40469612  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  40469613 aaatcgcacaattagcaaaacgataagggggaaaagtgcaattgaacacaaagatgg 40469669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 30191193 - 30191038
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  30191193 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 30191094  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30191093 aaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatg 30191038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 40221491 - 40221565
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg-aaaatcgc 162  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||    
T  40221491 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaaagatggggtgcaaaatcgc 40221565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 20347343 - 20347404
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  20347343 gtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgg 20347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 26737659 - 26737721
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaa-ttgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  26737659 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatttgaacacaaagatgg 26737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 15920918 - 15920975
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  15920918 aaaatcgcacaattagcaaaaagttagggggcaaaagtgcaattgaacacaaagatgg 15920975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 17345902 - 17345841
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg 154  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  17345902 aaaatcgcacaattaacaaaaatatagggggcaaaagtgcaattgaacacaaagatggagtg 17345841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 17345992 - 17345933
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  17345992 tgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagataaggtgcaaa 17345933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 39454762 - 39454712
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  39454762 attaaaattcgatttatttttgtcccttaatttctctctgttacacatttt 39454712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 11883933 - 11883981
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  11883933 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcca 11883981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20347248 - 20347313
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||| || |||||||||||||||||||||| ||||||||| ||||| ||||| |||||| ||||    
T  20347248 cttttgccaactgtgttttgttcaaaatcatcgttaaaagaggggaaatggggcaaaagatggggt 20347313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 24832391 - 24832331
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  24832391 aaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 24832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 26737527 - 26737482
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  26737527 aaaatcgcacaattagcaaaagataggagaaaagtgcaattaagcc 26737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26737565 - 26737629
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||||  ||||||||||||||||||||||||||||||||  |||| |||||||| |||||||    
T  26737565 cttttgtcaattgtgttttgttcaaaatcatcattaaaagaga-aaaaatgggctaaacatagggt 26737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 11883670 - 11883623
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  11883670 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40221397 - 40221457
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    |||||||||  ||||||| ||||||||||||||||||||||| || |||||||| ||||||    
T  40221397 cttttgtcaattgtgtttcgttcaaaatcatcattaaaagagggggaaaggggcaaaagat 40221457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 6171202 - 6171155
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  6171202 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcca 6171155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 40221359 - 40221312
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa-gtgcaattaagcca 201  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  40221359 aaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcca 40221312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 43495612 - 43495659
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagg-gggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43495612 aaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcca 43495659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 40469736 - 40469780
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaa 197  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  40469736 aaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 15321646 - 15321610
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaa 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15321646 tgtgttttgttcaaaatcatcattaaaagaggggaaa 15321610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 17345778 - 17345730
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagccatt 203  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||| |||||    
T  17345778 aaaattgcataattagcaaaagataggggaaaagtgcaattaaaccatt 17345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 20347471 - 20347518
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  20347471 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 30190970 - 30190923
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  30190970 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 30190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 32503605 - 32503653
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| ||||| ||| ||||||||||||||||||||    
T  32503605 taaaattcgatttattttggttccttaacttctctctgttacacatttt 32503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 11883674 - 11883628
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  11883674 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 11883929 - 11883975
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  11883929 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 15321437 - 15321394
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaag 198  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||    
T  15321437 aaaattgcacaattaacaaaagataggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 18055218 - 18055163
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  18055218 gtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 18055163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 24832382 - 24832336
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  24832382 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 24832336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 40469732 - 40469778
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  40469732 gtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 40469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 43495404 - 43495439
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaa 47  Q
    ||||||||||||||||||||||||||||||| ||||    
T  43495404 tgtgttttgttcaaaatcatcattaaaagaggggaa 43495439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 43495487 - 43495541
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||||||  |||||||||| |||| |||||||||||| |||||||    
T  43495487 gtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaaacacaa 43495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5921715 - 5921665
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| ||||| |||||||||| ||| |||||| |||||||||||||    
T  5921715 attaaaattcgatttttttttgttccttaacttctctttgttacacatttt 5921665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 5961726 - 5961776
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||||| || || ||| ||||||||||||||||||||    
T  5961726 attaaaaattgatttattttggtcccttaacttctctctgttacacatttt 5961776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 6495591 - 6495541
Alignment:
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||| |||||||| ||||||||||| ||| ||||||||||||| |||||||    
T  6495591 aaatagcacaattggcaaaaagataggggacaaaagtgcaattaaacacaa 6495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 19141856 - 19141898
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaa 197  Q
    |||||||||||||| |||||  |||||||||||||||||||||    
T  19141856 aaaatcgcacaattggcaaactatagggggaaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 28631603 - 28631553
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  28631603 attaaaattcgatttattttagtcccttaacttctctctgttacacatttt 28631553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 35408850 - 35408800
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||||||||||    
T  35408850 attaaaatttgatttattttggtatcttaacttctctctgttacacatttt 35408800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 40694504 - 40694454
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||||||||||| ||||||||||||    
T  40694504 attaaaattagatttattttggtcccttaatttctctccgttacacatttt 40694454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 41377683 - 41377633
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||||| |||||||||||||    
T  41377683 attaaaatttgatttattttggtcccttaacttctctttgttacacatttt 41377633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 41659802 - 41659852
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||||||||||    
T  41659802 attaaaatttgatttattttggtatcttaacttctctctgttacacatttt 41659852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 43183640 - 43183690
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || ||||||  |||||||||||||||||||    
T  43183640 attaaaattagatttattttggtcccataacatctctctgttacacatttt 43183690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 43183912 - 43183862
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  43183912 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 43183862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 44612540 - 44612598
Alignment:
Q  193 attaagccattaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||| |||||||||||||||||||||| || || ||| |||| || ||||||||||||    
T  44612540 attaacccattaaaatttgatttattttggtcccttaacttctatccgttacacatttt 44612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 17856518 - 17856465
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagt 254  Q
    |||||||||||||||||||| ||  | ||| |||||||||||| ||||||||||    
T  17856518 attaaaatttgatttattttggtctcttaacttctctctgttatacattttagt 17856465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 18296687 - 18296747
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||| ||| |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  18296687 aaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18296747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 26737788 - 26737836
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  26737788 aaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcca 26737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 30191232 - 30191280
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||    
T  30191232 aaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcca 30191280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 2639489 - 2639536
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  2639489 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 2639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6171463 - 6171510
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  6171463 aaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcc 6171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 16350398 - 16350346
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    |||||||||||||||||| ||  | ||| ||||||||||| ||||||||||||    
T  16350398 taaaatttgatttattttggtatcttaacttctctctgttgcacattttagtc 16350346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 16655933 - 16655885
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  16655933 taaaatttgatttattttggtcccttaacttctctccgttacacatttt 16655885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 18055093 - 18055050
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa-gtgcaattaag 198  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  18055093 aaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 26841634 - 26841587
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  26841634 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 26841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 31450725 - 31450773
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  31450725 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 31450773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 34820606 - 34820558
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  34820606 taaaatttgatttattttggtcccttaacttctctccgttacacatttt 34820558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 36211668 - 36211620
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  36211668 taaaatttgatttattttggtcccttaacttctctccgttacacatttt 36211620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 41790919 - 41790966
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||    
T  41790919 aaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 43495356 - 43495309
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag--ggggaaagtgcaattaagcc 200  Q
    ||||||||||||||||||||| ||||  ||| ||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcc 43495309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 37752384 - 37752228
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn-------gtgca 93  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||                 |||||    
T  37752384 ttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaaagaagagaaggtgca 37752285  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37752284 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 37752228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12281394 - 12281238
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  12281394 cttttgtcaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 12281295  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  12281294 aaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 12281238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 15156064 - 15156125
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15156064 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 15156125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 43162321 - 43162477
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||| |||| ||| |||          |||      ||    
T  43162321 cttttgtcaattgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatgaggtgcaaaatcgctcaaaaaatataagtgaggatgca 43162420  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  43162421 aaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgg 43162477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 43246046 - 43245985
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43246046 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatgg 43245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 18019962 - 18019902
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  18019962 gtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaattgaacacaaagatg 18019902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 9465747 - 9465688
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagat 148  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  9465747 gtgcaaaatcgcacagttagcaaaaagatagggggcaaaagtgcaattgaacacaaagat 9465688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 34313858 - 34314003
Alignment:
Q  11 ctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------caaaatcgcaca 103  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| ||| |||          |||      |||||||| |||    
T  34313858 ctgtgttttgttcaaaattatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgtaca 34313957  T
Q  104 attagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  34313958 attagcaaaaagataagggacaaaagtgcaattgaacacaaagatg 34314003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 41662286 - 41662341
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagat 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41662286 aaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagat 41662341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16929211 - 16929141
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  16929211 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaatggactaaagatagggtgcaaa 16929141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 765909 - 765848
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  765909 gtgcaaaatcgcacggttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 765848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 33748163 - 33748225
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaaga--tacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||||||||||||| |  || ||||||||||||||||||||||||||||||    
T  33748163 gtgcaaaatcgcacaattagcaaaaaaaaatagggggcaaaagtgcaattgaacacaaagatg 33748225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 7127830 - 7127891
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  7127830 gtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaattgaacacaaaaatgg 7127891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 9465831 - 9465782
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  9465831 tgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagat 9465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 16929114 - 16929054
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  16929114 gtgcaaaatctcacaattaacaaaaagataaggggcaaaagtgcaatt-aacacaaagatgg 16929054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43246143 - 43246078
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||||  |||||||||||||||||||||||||||| | ||||||||||| |||| |||||||    
T  43246143 cttttgtcaattgtgttttgttcaaaatcatcattaaaaaaaaggaaaagggggtaaaaatagggt 43246078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 74864 - 74924
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    ||||||||||||||||||  |||||||||| ||| ||||||||||||| ||||||||||||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaacacaaagatg 74924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15155969 - 15156029
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    |||||| || ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  15155969 cttttgccaactgtgttttgttcaaaatcatcactaaaagaggggaaaaggggcaaaagat 15156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 23123524 - 23123567
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaag 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  23123524 aaaatcgcacaattagcaaaagataaggggaaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 37670050 - 37670109
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||||||||||| |||||||||||| ||| ||||| |||||| |||||||||    
T  37670050 tgtgttttgttcaaaatcattattaaaagagagaaaatggggcaaaagattgggtacaaa 37670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7127735 - 7127805
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  ||||||||||| ||||||||||||||||||| |||||| |||| |||||| |||| ||||    
T  7127735 cttttgtcaattgtgttttgttaaaaatcatcattaaaagaggggaaaatgggcaaaagatggggtgcaaa 7127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 33748080 - 33748134
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||    
T  33748080 tgtgttttgttcaaaatcatcactaaaagagaggaaaatggactaaatatagggt 33748134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 34313810 - 34313764
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  34313810 aaaatcgcacaattaacaaaagataggggaaaagtgcaattaagcca 34313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 766003 - 765939
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||  |||||||||||    
T  766003 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatggg-aaaagatagggt 765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 43597957 - 43597908
Alignment:
Q  97 tcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaag 146  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  43597957 tcgcacaattagcaaaaagatagggggcaaaagcacaattgaacacaaag 43597908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 16928989 - 16928942
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag--ggggaaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  16928989 aaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcc 16928942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 23123441 - 23123489
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagg 64  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  23123441 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaaggtagg 23123489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 11007702 - 11007651
Alignment:
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||| ||||||||||| || |||||||||||||| |||||||    
T  11007702 aaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaacacaa 11007651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 14920740 - 14920690
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  14920740 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 14920690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 23244572 - 23244622
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  23244572 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 23244622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 30650247 - 30650297
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  30650247 attaaaatttgatttattttggttccttaacttctctccgttacacatttt 30650297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 37752144 - 37752083
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  37752144 aaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcca 37752083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6092822 - 6092777
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  6092822 aaaatcgcacaattgacaaaagatagggggaaaatgcaattaagcc 6092777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 9930791 - 9930746
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    ||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  9930791 ttttgttcaaaatcatcattaaaagaggggaaagggggcaaaagat 9930746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 16929249 - 16929297
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||    
T  16929249 aaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcca 16929297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18020057 - 18019992
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||| || ||| ||||||||||||||| |||||||||||  ||||||||||| |||||| ||||    
T  18020057 cttttggcaactgcgttttgttcaaaatcgtcattaaaagaagggaaaaggggcaaaagatggggt 18019992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 18020095 - 18020140
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||    
T  18020095 aaaatcgcacaattaacaaaagatagggtaaaagtgcaattaagcc 18020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 22787069 - 22787021
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  22787069 tgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagat 22787021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 37670134 - 37670195
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||| ||||||||||||||| ||| ||  ||||| ||||||| |||||||||||||    
T  37670134 gtgcaaaatcacacaattagcaaaaaaatatggtacaaaaatgcaattaaacacaaagatgg 37670195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 37752423 - 37752471
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  37752423 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcca 37752471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 41662410 - 41662458
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||    
T  41662410 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcca 41662458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 43245918 - 43245870
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  43245918 aaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcca 43245870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 44254922 - 44254975
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagt 254  Q
    |||||||||||||||||||| || || ||| |||| ||||||||||||||||||    
T  44254922 attaaaatttgatttattttggtcccttaacttctttctgttacacattttagt 44254975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 74780 - 74816
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaa 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  74780 tgtgttttgttcaaaatcatcattaaaagaggggaaa 74816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 3463739 - 3463795
Alignment:
Q  15 gttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||| |||||||||||||||||||||| || ||||| |||||| |||| ||||    
T  3463739 gttttgtttaaaatcatcattaaaagagaggtaagggggcaaaagatggggtgcaaa 3463795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 7127699 - 7127667
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa 187  Q
    |||||||||||||||||||||||||||||||||    
T  7127699 aaaatcgcacaattagcaaaagatagggggaaa 7127667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 12281171 - 12281124
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  12281171 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 12281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 15155930 - 15155883
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  15155930 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 15155883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 43246183 - 43246230
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  43246183 aaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcc 43246230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 18623718 - 18623667
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttta 252  Q
    ||||||||| ||||||||||  |||  |||||||||||||||||||||||||    
T  18623718 attaaaattcgatttattttgcttctttaatttctctctgttacacatttta 18623667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 22786985 - 22786930
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||| |  |||| ||||| ||||||||||||||||| |||||||    
T  22786985 gtgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaacacaa 22786930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 43162280 - 43162233
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  43162280 aaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagcca 43162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 765781 - 765736
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaag 198  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  765781 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 1826120 - 1826070
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  1826120 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 1826070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 1860565 - 1860515
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  1860565 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 1860515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 3463955 - 3464000
Alignment:
Q  158 atcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||    
T  3463955 atcgcacaattagcaaaatataggggggaaaagtgcaattaagcca 3464000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 13936769 - 13936723
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||    
T  13936769 aaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcc 13936723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 18914580 - 18914530
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  18914580 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 18914530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 31230670 - 31230720
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  31230670 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 31230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 39912248 - 39912194
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    |||||||||||||||||||| || || ||| |||||||  |||||||||||||||    
T  39912248 attaaaatttgatttattttggtcccttaacttctctccattacacattttagtc 39912194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 41662214 - 41662252
Alignment:
Q  28 tcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  41662214 tcatcattaaaagaggggaaaaggggcaaaagatagggt 41662252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 3463687 - 3463642
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    ||||| ||||||||| ||||||||||||||||| || |||||||||    
T  3463687 aaaattgcacaattaacaaaagatagggggaaaatgtaattaagcc 3463642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 6843552 - 6843604
Alignment:
Q  201 attaaaatttgatttatttttgttcc--ataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || ||  |||| ||||||||||||||||||||    
T  6843552 attaaaatttgatttattttggtcccttataacttctctctgttacacatttt 6843604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 12281433 - 12281481
Alignment:
Q  155 aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagcca 201  Q
    ||||||||||||||| |||||||||  |||| |||||||||||||||||    
T  12281433 aaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcca 12281481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 15156192 - 15156240
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  15156192 aaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcca 15156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 30568604 - 30568555
Alignment:
Q  202 ttaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||||||||||||| || || |||||| |||| ||||||||||||    
T  30568604 ttaaaatttgatttattttggtcccttaatttttctccgttacacatttt 30568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 39724055 - 39724103
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  39724055 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcca 39724103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 74732 - 74688
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaag 198  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||    
T  74732 aaaatcgcacaattagcaaaagatggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 3463826 - 3463877
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||| ||||||||||| |||| ||| |||||||| |||||||    
T  3463826 caaaatcgcacaattggcaaaaagata-ggggtaaatgtgcaattaaacacaa 3463877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 9823368 - 9823415
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  9823368 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 9823415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 13026682 - 13026635
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  13026682 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 41662154 - 41662107
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa--gtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||| |||||||  |||||||||||||    
T  41662154 aaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcc 41662107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 43598762 - 43598790
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggg 183  Q
    |||||||||||||||||||||||||||||    
T  43598762 aaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 71; Significance: 3e-32; HSPs: 4)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6481 - 6637
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgca 93  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| |||          |      ||||    
T  6481 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaagggactaaagatagggtgcaaaatcgctcaagaaaaagaagagaaggtgca 6580  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6581 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 6637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 6704 - 6752
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccat 202  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6704 aaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccat 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6441 - 6394
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  6441 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 6394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 6445 - 6399
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  6445 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25153 - 25309
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc------acnnnnnnnnngtgca 93  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||      |          |||||    
T  25153 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaattgctcaaaaaaaagaagagaaggtgca 25252  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25253 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 25309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 25376 - 25423
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25376 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 25423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 25372 - 25418
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  25372 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 25418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18433285 - 18433129
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgca 93  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||          |      ||||    
T  18433285 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgtaaaatcgctcaaaaaaaagaagagaaggtgca 18433186  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18433185 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 18433129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 26020719 - 26020564
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc-----acnnnnnnnnngtgcaa 94  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||     |          ||||||    
T  26020719 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaagaagagaatgtgcaa 26020620  T
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  26020619 aatcgcacaattaacaaaaagataagggacaaaagtgcaattgaacacaaagatgg 26020564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 34577133 - 34576979
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn-----gtgcaa 94  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| | |               ||||||    
T  34577133 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggg-ctaaagatagggtgcaaaatcgctaaaaaaatgaagagaatgtgcaa 34577035  T
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34577034 aatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatgg 34576979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25116027 - 25115871
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  25116027 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 25115928  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25115927 aaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatgg 25115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25175119 - 25174963
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  25175119 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 25175020  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25175019 aaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatgg 25174963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 5187694 - 5187637
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  5187694 caaaatcgcataattagcaaaaagataggggacaaaagtgcaattgaacacaaagatg 5187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 5779658 - 5779797
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc-----acnnnnnnnnngtgcaaaatcgcacaat 105  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| | |||||| ||     |           ||||||||||||||||    
T  5779658 tgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctcaaaagaagaagaagagatgcaaaatcgcacaat 5779757  T
Q  106 tagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    ||||||||||||| | | ||||||||||||||||||||||    
T  5779758 tagcaaaaagataggagacaaaagtgcaattgaacacaaa 5779797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 12441320 - 12441365
Alignment:
Q  156 aaatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagataggggaaaagtgcaattaagcca 12441365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 9665700 - 9665641
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||| |||||||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  9665700 tgcagaatcgcacaattagcaaaaagatagggggcaaaaacacaattgaacacaaagatg 9665641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 22428993 - 22428934
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaagcc 200  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22428993 aaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcc 22428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 22429028 - 22429086
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||    
T  22429028 tgtgttttgttcaaaatcatcattaaaagagagg-gaaggggctacagatagggtgcaaa 22429086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12441098 - 12441168
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||  ||| |||||| |||| ||||    
T  12441098 cttttgtcaattgtgttttgttcaaaatcatcattaaaagaggggaaaaccggcaaaagatggggtgcaaa 12441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 18433075 - 18433014
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  18433075 aaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcca 18433014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 12441196 - 12441249
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    |||||||||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaacacaaa 12441249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 34576926 - 34576870
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaa 197  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  34576926 aaagatggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 9665615 - 9665560
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagggggaaagtgcaattaa 197  Q
    |||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  9665615 aaagatggggtgcaaaattgcacaattagcaaaagataggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 22429190 - 22429249
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22429190 aaagatggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcc 22429249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7399407 - 7399357
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  7399407 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 7399357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 9869741 - 9869795
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacaca 143  Q
    |||||||||||||||||| | ||||||| | ||||||||||||||||| ||||||    
T  9869741 gtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaacaca 9869795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 23011261 - 23011315
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||||| || |||||||| ||||||||| ||||||| |||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaaacacaa 23011315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 31656687 - 31656637
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||||||||    
T  31656687 attaaaattcgatttattttggtcccataacttctctctgttacacatttt 31656637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 26020510 - 26020450
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagg--gggaaagtgcaattaagcc 200  Q
    |||||||| ||| |||||||||||||||||||||||||||  || ||||||||||||||||    
T  26020510 aaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 34577158 - 34577219
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagggg-gaaagtgcaattaagccat 202  Q
    |||||||| ||| |||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  34577158 aaagatggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagccat 34577219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 10656421 - 10656373
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||||    
T  10656421 taaaatttgatttattttagtcccttaacttctctctgttacacatttt 10656373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 16466749 - 16466796
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  16466749 aaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 18433323 - 18433370
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  18433323 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 25116068 - 25116115
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  25116068 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25116115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 25175158 - 25175205
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  25175158 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25175205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 9665785 - 9665726
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||||||||||  |||||||||| |||||| |||| |||||| |||| ||||    
T  9665785 tgtgttttgttcaaaatcaatattaaaagaggggaaaaagggcaaaagatggggtgcaaa 9665726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 9869655 - 9869714
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||| || ||| |||| ||||    
T  9869655 tgtgttttgttcaaaatcatcgttaaaagaggggaaagggggcaaatgatggggtgcaaa 9869714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 18433066 - 18433020
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  18433066 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 18433020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 23011125 - 23011078
Alignment:
Q  155 aaaatcgcacaattagcaaaagat-agggggaaagtgcaattaagcca 201  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  23011125 aaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcca 23011078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5152944 - 5152894
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||  | |||||||||| |||||||||||||    
T  5152944 attaaaatttgatttattttggtatcttaatttctctttgttacacatttt 5152894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 7210513 - 7210563
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  7210513 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 7210563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 12593785 - 12593735
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  12593785 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 12593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 16726129 - 16726084
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaat 135  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||    
T  16726129 gtgcaaaatcgcacaattggcaaaa-gatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 23011167 - 23011213
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaa 48  Q
    ||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  23011167 ttttgtcaaatgtgttttgctcaaaatcatcattaaaagaggggaaa 23011213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 36751959 - 36752009
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||||||||||| |||||||    
T  36751959 attaaaatttgatttattttagtcccttaacttctctctgttaaacatttt 36752009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 41383174 - 41383220
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  41383174 aaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcc 41383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 9665839 - 9665880
Alignment:
Q  161 gcacaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  9665839 gcacaattagcaaaagatagggggaaaagtggaattaagcca 9665880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 18817618 - 18817666
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  18817618 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcca 18817666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 25115804 - 25115757
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  25115804 aaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25115757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 25174896 - 25174849
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  25174896 aaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25174849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 13772698 - 13772863
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn-------gtgc 92  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||                 ||||    
T  13772698 cttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaaagaagagaaggtgc 13772797  T
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtgaaaa 158  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  13772798 aaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgaaaa 13772863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9412109 - 9412265
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  9412109 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 9412208  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  9412209 aaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 9412265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 150
Target Start/End: Original strand, 6908309 - 6908454
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgcaaaatcgcacaa 104  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||| |||          |      |||||||||||||||    
T  6908309 tgtgttttgttcaaaatcatcattaaaagagaggaaaaatggctaaagatagggtgcaaaatcgctcaaaaagaagaagaatgggtgcaaaatcgcacaa 6908408  T
Q  105 ttagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||    
T  6908409 ttagcaaaaagatagggggtaaaagcgcaattgaacacaaagatgg 6908454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3687441 - 3687597
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtgc------a 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| |||||| |||| |||| ||| |||          |||       |    
T  3687441 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatggggtgcaaaatcgctcaaaaaatataagtgagggtgta 3687540  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  3687541 aaatcgcacaattagcaaaaaaataagggacaaaagtgcaattgaacacaaagatgg 3687597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 15567169 - 15567229
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  15567169 tgcaaaatcacacaattagcaaaaagagagggggcaaacgtgcaattgaacacaaagatgg 15567229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 5349641 - 5349702
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||||||||| ||||||||||    
T  5349641 gtgcaaaattgcacaatatgcaaaaagatagggggcaaaagtgcaattgaatacaaagatgg 5349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 33628553 - 33628492
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  33628553 gtgcaaaattgcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaaggatgg 33628492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 33628633 - 33628586
Alignment:
Q  24 aaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33628633 aaaatcatcattaaaagagaggaaaaggggctaaagataaggttcaaa 33628586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 35080132 - 35080191
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    ||||||||||||||||||||  ||||||| ||||||||||  ||||||||||||||||||    
T  35080132 tgcaaaatcgcacaattagcttaaagatagggggcaaaagcacaattgaacacaaagatg 35080191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5349546 - 5349616
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||| | |||||||||||||||||||||||||||||| || ||| |||| |||||| |||| ||||    
T  5349546 cttttgtcaaccgtgttttgttcaaaatcatcattaaaagagggggaaatgggcaaaagatggggtgcaaa 5349616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27096299 - 27096245
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  27096299 tgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggt 27096245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27182004 - 27182058
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  27182004 tgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggt 27182058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 5349727 - 5349787
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagccatt 203  Q
    |||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5349727 aaagatggggtgcaaaatcgcacaattaacaaaagata-ggggaaagtgcaattaagccatt 5349787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 34235858 - 34235919
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||| |||||| |||||| | ||||||||| ||||||||||||||||| |||||||||||||    
T  34235858 gtgcgaaatcgaacaatttgaaaaaagatagggggcaaaagtgcaattaaacacaaagatgg 34235919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15567075 - 15567135
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    |||||||||  ||||||||||||||||||| ||||||||||| | ||||||||| ||||||    
T  15567075 cttttgtcaattgtgttttgttcaaaatcagcattaaaagagggaaaaaggggcaaaagat 15567135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 23686724 - 23686771
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23686724 aaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 23686771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 38191528 - 38191464
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||  ||||||| |||||| ||||    
T  38191528 ttttgtcaattgtgttttgttcaaaatcatcattaaaagagggggtaaggggcaaaagatggggt 38191464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 18925232 - 18925279
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  18925232 gtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatt 18925279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 27096093 - 27096046
Alignment:
Q  155 aaaatcgcacaattagcaaaagata-gggggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27096093 aaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcca 27096046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 27182210 - 27182257
Alignment:
Q  155 aaaatcgcacaattagcaaaagata-gggggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27182210 aaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcca 27182257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 29291903 - 29291962
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||||||||||||| |||||  |||| |||||| |||| ||||    
T  29291903 tgtgttttgttcaaaatcatcattaaaagaggggaaagagggcaaaagatggggtgcaaa 29291962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 3204714 - 3204668
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||    
T  3204714 aaaatcgcacaattggcaaactatagggggaaagtgcaattaagcca 3204668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 18925143 - 18925193
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggg 52  Q
    ||||||||  ||||||||||||||||||||||||||||||| | |||||||    
T  18925143 ttttgtcaattgtgttttgttcaaaatcatcattaaaagagggaaaaaggg 18925193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 27096216 - 27096170
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  27096216 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaatt 27096170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 27182087 - 27182133
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  27182087 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaatt 27182133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 34568913 - 34568863
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||||||||||||||||| || ||| |||||||||||| |||||||    
T  34568913 attaaaatttgatttatttttgtcccttaacttctctctgttatacatttt 34568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 3687663 - 3687711
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||    
T  3687663 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcca 3687711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 13772908 - 13772956
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||    
T  13772908 aaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcca 13772956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 9412332 - 9412379
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  9412332 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 9412379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 18925329 - 18925373
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagc 199  Q
    ||||||||||||||||||||| |||| || |||||||||||||||    
T  18925329 aaaatcgcacaattagcaaaatatagaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 35079999 - 35079959
Alignment:
Q  162 cacaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35079999 cacaattagcaaaagatagggggaaaagtgcaattaagcca 35079959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 3687401 - 3687352
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg---aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||||   |||||||||||||||||    
T  3687401 aaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcca 3687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 5735427 - 5735372
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||||||| || | |||||||||| | |||||||    
T  5735427 gtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaaataaacacaa 5735372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 6908491 - 6908534
Alignment:
Q  155 aaaatcgcacaattagcaaaagata-gggggaaagtgcaattaa 197  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  6908491 aaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 23686459 - 23686420
Alignment:
Q  163 acaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  23686459 acaattagcaaaagatagggggaaaagtgcaattaagcca 23686420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 34235775 - 34235834
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||| |||||| |||| ||||    
T  34235775 tgtgttttgttcaaaatcatctttaaaagaggggaatgggggcaaaagatggggtgcaaa 34235834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 35080051 - 35080094
Alignment:
Q  17 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaaga 60  Q
    ||||||||||||||||||||||||||  |||||||||| |||||    
T  35080051 tttgttcaaaatcatcattaaaagaggtgaaaaggggcaaaaga 35080094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 38191434 - 38191388
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  38191434 gtgcaaaatcgcacaattggcaaaaagata-ggggaaaaagtgcaatt 38191388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 5238508 - 5238562
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    |||||||||  ||||||||| || || ||| ||||||||||||||||||||||||    
T  5238508 attaaaattcaatttattttggtcccttaagttctctctgttacacattttagtc 5238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 5735500 - 5735458
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggggctaaa 58  Q
    ||||||||||||||||||||||||||| || ||||||| ||||    
T  5735500 ttttgttcaaaatcatcattaaaagagggggaaagggggtaaa 5735458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6908259 - 6908213
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  6908259 aaaatcgcacaattaacaatagatagggggaaaagtgcaattaagcc 6908213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 8769611 - 8769561
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || |||  |||||||||||||||||||    
T  8769611 attaaaatttgatttattttggtcccttaacatctctctgttacacatttt 8769561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 9230733 - 9230783
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  9230733 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 9230783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 23686676 - 23686646
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagag 42  Q
    |||||||||||||||||||||||||||||||    
T  23686676 tgtgttttgttcaaaatcatcattaaaagag 23686646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 31715950 - 31715900
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || | |||| ||||||| ||||||||||||    
T  31715950 attaaaatttgatttattttggtcctataacttctctccgttacacatttt 31715900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 32706789 - 32706843
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    ||||||||| |||||||||| ||||| ||| |||||||  |||||||||||||||    
T  32706789 attaaaattcgatttattttggttccttaacttctctcaattacacattttagtc 32706843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 43726301 - 43726350
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  43726301 attaaaatttgatttatttg-gttccttaacttctctctgttacacatttt 43726350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 43726571 - 43726521
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||||||| |||||||||||    
T  43726571 attaaaatttgatttattttggtcccttaacttctctctattacacatttt 43726521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 8953896 - 8953941
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagc 199  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||    
T  8953896 aaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 13772701 - 13772641
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagg--gggaaagtgcaattaagcc 200  Q
    |||||||| ||| |||||| ||||||||||||||||||||  || ||||||||||||||||    
T  13772701 aaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcc 13772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 18925109 - 18925061
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    ||||| ||||||||||||||||||||||  | |||||||||||||||||    
T  18925109 aaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcca 18925061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 44599536 - 44599488
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  44599536 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcca 44599488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8953773 - 8953717
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    ||||||||||||||| ||   ||||||||| ||| ||||||||||||| ||||||||    
T  8953773 gtgcaaaatcgcacatttgctaaaaagataggggacaaaagtgcaattaaacacaaa 8953717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 9035300 - 9035351
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagccatta 204  Q
    |||||||||||||| |||||  ||||||||  ||||||||||||||||||||    
T  9035300 aaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccatta 9035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 9412070 - 9412023
Alignment:
Q  155 aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagcc 200  Q
    ||||||||||||||| |||||||||  |||| ||||||||||||||||    
T  9412070 aaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 9412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 10625411 - 10625363
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  10625411 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 10625363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 13863955 - 13864010
Alignment:
Q  147 atggagtgaaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||| ||| ||||||||||||| |||||||||||||  | ||||||||||||||||    
T  13863955 atggggtgcaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 23686723 - 23686766
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||    
T  23686723 caaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 23686766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 31623751 - 31623703
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || |||||| || |||| ||||||||||||    
T  31623751 taaaatttgatttattttggtcccataacttttctccgttacacatttt 31623703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 44600142 - 44600189
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  44600142 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16555601 - 16555757
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtc------acnnnnnnnnngtgca 93  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| ||      |          |||||    
T  16555601 cttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaagggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgca 16555700  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  16555701 aaatcgcacaattagcaaaaagataagggggaaaagtgcaattgaacacaaagatgg 16555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11241474 - 11241630
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| |||          |||      ||    
T  11241474 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaattataagtgagggtgca 11241573  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11241574 aaatcgcacaattagcaaaaagataaggggcaaaagtgaaattgaacacaaagatgg 11241630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5206060 - 5206199
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng----tgcaaaatcgcacaattagca 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||          |    |||||||||||||||||||||    
T  5206060 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcagaaaaaaagagggagtgcaaaatcgcacaattagca 5206159  T
Q  111 aaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||| |||| | ||||||||||||||||||||||||    
T  5206160 aaaagatagggggaagaagtgcaattgaacacaaagatgg 5206199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3930264 - 3930420
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||| ||| |||          |||      ||    
T  3930264 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctcaaaaaatataagtgagggtgca 3930363  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  3930364 aaatcgcacaattagcaaaaagataagggacaaaagtgcaattggacacaaagatgg 3930420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22681849 - 22681693
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||  ||| ||| |||          |||      ||    
T  22681849 cttttgtcaactatgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgtaaaatcgctcaaaaaatataagtgaatgtgca 22681750  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  22681749 aaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgg 22681693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8488451 - 8488301
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn---gtgcaaaa 96  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||| |||             ||||||||    
T  8488451 cttttgtcaattgtattttgttcaaaatcatcattaaaagagaggaaaaggggttaaaaataaggtgcaaaatcgttcaaaaaaagaagagggtgcaaaa 8488352  T
Q  97 tcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaaga 147  Q
    | |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  8488351 ttgcacaattagcaaaaacatagggggcaaaagtgcaattgaacacaaaga 8488301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 150
Target Start/End: Original strand, 27304813 - 27304957
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggt-----cacnnnnnnnnngtgcaaaatcgcacaat 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| |      |          |||||||||||||||||    
T  27304813 tgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgcttaaaaaaggaagagggggtgcaaaatcgcacaat 27304912  T
Q  106 tagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||| |||| |||||||||||||||| |||| ||||    
T  27304913 tagcaaaaagatagggggaaaaagtgcaattgaactcaaatatgg 27304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 35393651 - 35393592
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagat 148  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  35393651 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagttcaattgaacacaaagat 35393592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 13198779 - 13198719
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  13198779 gtgcaaaatcgcacaattagaaaaaagataagggacaaaagtgcaattgaacacaaagatg 13198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 49178691 - 49178636
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  49178691 gtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaattgaacacaa 49178636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39415310 - 39415362
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaagggg 53  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  39415310 cttttgtcaattgtgttttgttcaaaatcatcattaaaagaggggaaaagggg 39415362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35393745 - 35393682
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagg 64  Q
    |||||||||  ||||||||| ||||||||||||||||||||| |||||| |||| |||||||||    
T  35393745 cttttgtcaattgtgttttgctcaaaatcatcattaaaagaggggaaaatgggcaaaagatagg 35393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 3930487 - 3930533
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3930487 aaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 3930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 13198862 - 13198809
Alignment:
Q  13 gtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||||||    
T  13198862 gtgttttgttcaaagtcatcattaaaagaggggaaaatgggcaaaagatagggt 13198809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 8182043 - 8181996
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||    
T  8182043 gtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaatt 8181996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7603200 - 7603270
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  |||||||||||||||||||||||||||| || ||||| ||| | |||||| |||| ||||    
T  7603200 cttttgtcaattgtgttttgttcaaaatcatcattaaaataggggaaatgggacaaaagatggggtgcaaa 7603270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 16555811 - 16555872
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagcca 201  Q
    |||||||| ||| |||||||||||||||||||||||||  |||| |||||||||||||||||    
T  16555811 aaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcca 16555872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 27304763 - 27304717
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||    
T  27304763 aaaatcgcacaattagcagaagataggggaaaagggcaattaagcca 27304717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 44710732 - 44710678
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||||||    
T  44710732 attaaaattcgatttattttggtcccttaacttctctctgttacacattttagtc 44710678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49178772 - 49178719
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| ||||    
T  49178772 tgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagattgggt 49178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 23539886 - 23539841
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||    
T  23539886 aaaatcgcacaattggcaaactatagggggaaagtgcaattaagcc 23539841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 24775690 - 24775633
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||| ||||||| ||||    
T  24775690 caaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaacacaaggatg 24775633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 7603296 - 7603352
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    ||||||||||||||| || | ||||||||| || |||||||||||||| ||||||||    
T  7603296 gtgcaaaatcgcacatttggtaaaaagatagggagcaaaagtgcaattaaacacaaa 7603352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 13198913 - 13198960
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  13198913 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 13198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 56505740 - 56505693
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  56505740 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 8182127 - 8182092
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaa 47  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8182127 tgtgttttgttcaaaatcatcattaaaagaggggaa 8182092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 8182175 - 8182222
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  8182175 gtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaatt 8182222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 16555820 - 16555866
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  16555820 gtgcaaaatcgcacaattagc-aaaagataagggggaaaagtgcaatt 16555866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 21218176 - 21218126
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  21218176 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 21218126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 25218141 - 25218191
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  25218141 attaaaattcgatttattttagtcccttaacttctctctgttacacatttt 25218191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 34959160 - 34959110
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| ||||  |||||||| |||||||||||||||    
T  34959160 attaaaattcgatttattttggttctttaatttctttctgttacacatttt 34959110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 35393787 - 35393829
Alignment:
Q  159 tcgcacaattagcaaaagataggg-ggaaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  35393787 tcgcacaattagcaaaagatagggtgaaaagtgcaattaagcc 35393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 45911636 - 45911686
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  45911636 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 45911686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 46200541 - 46200591
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  46200541 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 46200591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 52915009 - 52915059
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  52915009 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 52915059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 3844440 - 3844411
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaaga 41  Q
    ||||||||||||||||||||||||||||||    
T  3844440 tgtgttttgttcaaaatcatcattaaaaga 3844411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 22681621 - 22681576
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaagc 199  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||    
T  22681621 aaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 5206233 - 5206278
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  5206233 gtgcaaaatcgcacaatta--aaaaagataagggggaaaagtgcaatt 5206278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 7603190 - 7603146
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagc 199  Q
    ||||| |||||||||  |||||||||||| |||||||||||||||    
T  7603190 aaaattgcacaattaaaaaaagataggggaaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 16555562 - 16555515
Alignment:
Q  155 aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagcc 200  Q
    ||||||||||||||| |||||||||  |||| ||||||||||||||||    
T  16555562 aaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 16555515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 18077209 - 18077256
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    ||||||||||||||||||||| ||||||  | ||||||||||||||||    
T  18077209 aaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcc 18077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 33626191 - 33626143
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  33626191 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 33626143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 44428630 - 44428678
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| |||||| |||||||||||||    
T  44428630 taaaatttgatttattttggtcccttaacttctctttgttacacatttt 44428678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 44432951 - 44432903
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| |||||| |||||||||||||    
T  44432951 taaaatttgatttattttggtcccttaacttctctttgttacacatttt 44432903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 45683176 - 45683224
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||||||||||||  | || ||| ||||||||||||||||||||    
T  45683176 taaaatttgatttattttgatcccttaacttctctctgttacacatttt 45683224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 46621254 - 46621206
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || |  ||||||||||||||||||||||||    
T  46621254 taaaattcgatttattttggtcctttaatttctctctgttacacatttt 46621206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 50678826 - 50678779
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  50678826 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 50678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 54509122 - 54509154
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa 187  Q
    ||||||||||||||||||||| |||||||||||    
T  54509122 aaaatcgcacaattagcaaaaaatagggggaaa 54509154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10293877 - 10293721
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| |||          |||      ||    
T  10293877 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 10293778  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  10293777 aaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 10293721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 9026991 - 9026849
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgcaaaatcgcacaa 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||          |      |||||||||||||||    
T  9026991 tgtgttttgttaaaaatcatcattaaaagagaggaaaaggggctaaagataaggtgcaaaatcgttcaaaaaaaagaagagagagtgcaaaatcgcacaa 9026892  T
Q  105 ttagcaaaaagatacggggcaaaagtgcaattgaacacaaaga 147  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  9026891 ttagcaaaaagatagggggcaaaagtgcaattgaacacaaaga 9026849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 20968804 - 20968960
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||          |||      ||    
T  20968804 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgca 20968903  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  20968904 aaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatgg 20968960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 18875064 - 18875003
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18875064 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatgg 18875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 3644723 - 3644838
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg-aaaatcgcacaattagcaaaagata--ggggga 185  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||| |||  |||| |    
T  3644723 gtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaaacacaaagatggggtgcaaaatcgcacaattaacaaaaaataagggggaa 3644822  T
Q  186 aagtgcaattaagcca 201  Q
    || |||||||||||||    
T  3644823 aaatgcaattaagcca 3644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 4947433 - 4947377
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||    
T  4947433 gtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattgagcacaaa 4947377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 45060775 - 45060830
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  45060775 gtgcaaaatcgaacaattggcaaaaagata-ggggcaaaagtgcaattgaacacaaa 45060830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 3644629 - 3644688
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||| |||||||||||||||||| |||||| |||| ||||||||||| ||||    
T  3644629 tgtgttttgttcgaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaa 3644688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 13657624 - 13657679
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||    
T  13657624 gtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaacacaa 13657679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 18875148 - 18875094
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  18875148 tgtgttttattcaaaatcatcattaaaatagaagaaaatgggctaaagatagggt 18875094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 47871129 - 47871175
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  47871129 aaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 47871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 1101093 - 1101148
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaa 145  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  1101093 gtgcaaaatcgcacaattgacaaaaagata-ggggcaaaagtgcaattaaacacaaa 1101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 17372345 - 17372294
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa--gtgcaattaagccatta 204  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  17372345 aaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagccatta 17372294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 17372476 - 17372531
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||||||| || |||||||||| ||| |||||||    
T  17372476 gtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaacacaa 17372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 17440806 - 17440763
Alignment:
Q  157 aatcgcacaattagcaaaagatagggggaaagtgcaattaagcc 200  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  17440806 aatcgcacaattagcaaatgataggaggaaagtgcaattaagcc 17440763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 27254041 - 27254091
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  27254041 attaaaatttgatttattttggttccttaacttctctccgttacacatttt 27254091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 29248376 - 29248426
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  29248376 attaaaatttaatttattttggttccttaacttctctctgttacacatttt 29248426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 54081613 - 54081563
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||||||||||||    
T  54081613 attaaaattcgatttattttggttccttaacttctctctgttacacatttt 54081563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 10293916 - 10293964
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  10293916 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcca 10293964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 14015873 - 14015926
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagata-cggggcaaaagtgcaattgaaca 141  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  14015873 gtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaaca 14015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 18874933 - 18874885
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattga 138  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  18874933 gtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattga 18874885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 20969026 - 20969074
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||    
T  20969026 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcca 20969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 26540826 - 26540777
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    ||||||||||||||||||||||||||||||| ||||| | ||| ||||||    
T  26540826 tgtgttttgttcaaaatcatcattaaaagaggggaaatgaggcaaaagat 26540777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 26540876 - 26540909
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaag 188  Q
    ||||||||||||||||||||||||||||||||||    
T  26540876 aaaatcgcacaattagcaaaagatagggggaaag 26540909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 45060682 - 45060751
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    ||||||||  |||||||||||||||||||||||||||| || |||||  |||| |||||| |||| ||||    
T  45060682 ttttgtcaattgtgttttgttcaaaatcatcattaaaataggggaaagtgggcaaaagatggggtgcaaa 45060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 13657543 - 13657579
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaa 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13657543 tgtgttttgttcaaaatcatcattaaaagaggggaaa 13657579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 17372601 - 17372645
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagc 199  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||    
T  17372601 aaaatcgcacaattagtaaaatataggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 17440929 - 17440877
Alignment:
Q  92 caaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||    
T  17440929 caaaatcgcacaattggcaaaaatatatggggcaaaaatgcaattaaacacaa 17440877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 18874929 - 18874897
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa 187  Q
    |||||||||||||||||||||||||||||||||    
T  18874929 aaaatcgcacaattagcaaaagatagggggaaa 18874897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 18875198 - 18875245
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  18875198 aaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 42627499 - 42627463
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaaaggg 52  Q
    ||||||||||||||||||||||||||| |||||||||    
T  42627499 ttttgttcaaaatcatcattaaaagaggggaaaaggg 42627463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 42627553 - 42627601
Alignment:
Q  155 aaaatcgcacaattagcaaaagatag-ggggaaagtgcaattaagccat 202  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  42627553 aaaatcacacaattagcaaaagatagagggaaaagtgcaattaagccat 42627601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 45060878 - 45060925
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||    
T  45060878 aaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcc 45060925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 9027040 - 9027087
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcca 201  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  9027040 aaaattgcacaattagcaaaagatagggggaaaagtgaaattaagcca 9027087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 18875194 - 18875240
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  18875194 gtgcaaaatcgtacaattagcaaaa-gatagggggcaaaagtgcaatt 18875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 47870917 - 47870976
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||||| |||||||||||||||| | |||||| |||| |||||| |||| ||||    
T  47870917 tgtgttttgttcgaaatcatcattaaaagtggggaaaatgggcaaaagatggggtgcaaa 47870976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 4846925 - 4846875
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| ||  ||||| ||||||||||||||||||||    
T  4846925 attaaaattcgatttattttggtctcataacttctctctgttacacatttt 4846875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 7743094 - 7743044
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| ||  ||||| || |||||||||||||||||    
T  7743094 attaaaatttgatttattttggtctcataacttatctctgttacacatttt 7743044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 34521323 - 34521373
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  34521323 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 34521373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 40410769 - 40410819
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||||| |||||||||||||    
T  40410769 attaaaatttgatttattttggtcccttaacttctctttgttacacatttt 40410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 41208729 - 41208679
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || |||  |||||||||||||||||||    
T  41208729 attaaaatttgatttattttagtcccttaacatctctctgttacacatttt 41208679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 43899168 - 43899218
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  43899168 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 43899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 45060643 - 45060594
Alignment:
Q  155 aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagccat 202  Q
    ||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  45060643 aaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagccat 45060594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 52606185 - 52606235
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  52606185 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 52606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 52609691 - 52609641
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || |||||||||||||||||| |||||    
T  52609691 attaaaattcgatttattttggtcccttaatttctctctgttacatatttt 52609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 53841355 - 53841305
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||||||||||| ||||||||||||    
T  53841355 attaaaattcgatttattttggtcccttaatttctctccgttacacatttt 53841305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 20968765 - 20968713
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagccattaa 205  Q
    ||||||||||||||| ||||||||||||||  || ||||||||||||| ||||    
T  20968765 aaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcctttaa 20968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 47871005 - 47871049
Alignment:
Q  91 gcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  47871005 gcaaaatcgcacaattggcaaaaagata-ggggcaaaagtgtaatt 47871049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1100997 - 1101045
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaa 49  Q
    |||||||||  ||| ||||||||||||| ||||||||||||| ||||||    
T  1100997 cttttgtcaattgtattttgttcaaaattatcattaaaagaggggaaaa 1101045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 10756777 - 10756825
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  10756777 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 10756825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 14015795 - 14015827
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaaa 48  Q
    ||||||||||||||||||||||||||| |||||    
T  14015795 ttttgttcaaaatcatcattaaaagaggggaaa 14015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 14015958 - 14016014
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagatagg-gggaaagtgcaattaa 197  Q
    |||||||| ||| |||||||||||||||||||||||||||  | |||||||||||||    
T  14015958 aaagatggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17372398 - 17372454
Alignment:
Q  16 ttttgttcaaaatcatcattaaaagagaggaa-aaggggctaaagatagggtacaaa 71  Q
    ||||||||||||||||||||||||||| ||||  |||||| |||||| |||| ||||    
T  17372398 ttttgttcaaaatcatcattaaaagaggggaaggaggggcaaaagatggggtgcaaa 17372454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 42673024 - 42672976
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccat 202  Q
    |||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  42673024 aaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccat 42672976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 53688301 - 53688357
Alignment:
Q  147 atggagtg-aaaatcgcacaattagcaaaagatagggg-gaaagtgcaattaagcca 201  Q
    |||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||    
T  53688301 atggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagcca 53688357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22149486 - 22149642
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgca 93  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||          |      ||||    
T  22149486 cttttgtcaattgtgctttgttcaaaatcatcattaaaagagaggaaaaggggttaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgca 22149585  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22149586 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatgg 22149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8108806 - 8108962
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt-acaaatcggtcacnnnnnnnnngtgc------a 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| | |||||| |||          |||       |    
T  8108806 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgaaaaatcgctcaaaaaatataagtgagggtgta 8108905  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8108906 aaatcgcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaagatgg 8108962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 17518388 - 17518544
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnngtg------ca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||| | |||| ||| |||          |||      ||    
T  17518388 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagataggatgcaaaatcgctcaaaaaatataagtgagggtgca 17518487  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17518488 aaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 17518544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 41083177 - 41083022
Alignment:
Q  2 ttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtac-aaatcggtca------cnnnnnnnnngtgcaa 94  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| | |||                ||||||    
T  41083177 ttttgccaactgtgttttgttcaaaatcatcattaaaagagaggaaaaggggcaaaagatagggtgcaaaattgctcaaaaaatataagtgagggtgcaa 41083078  T
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  41083077 aatcgcacaattagtaaaaagataaggggcaaaagtacaattgaacacaaagatgg 41083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47955576 - 47955421
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa-tcggtcacnnnnnnnnn------gtgca 93  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||| |||                |||||    
T  47955576 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatataattgagggtgca 47955477  T
Q  94 aaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47955476 aaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatg 47955421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 46056948 - 46056904
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  46056948 aaaatcgcaaaattagcaaaagatagggggaaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 1176763 - 1176712
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccattaa 205  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1176763 aaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccattaa 1176712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 13589666 - 13589712
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  13589666 aaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 13589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 31848067 - 31848013
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||| |||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaacacaa 31848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 46057068 - 46057013
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||    
T  46057068 gtgcaaaatcgcacaattggcaaaaaaatagggggcaaaattgcaattaaacacaa 46057013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5463447 - 5463397
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  5463447 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 5463397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 23281339 - 23281289
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||||||||    
T  23281339 attaaaattcgatttattttggtcccataacttctctctgttacacatttt 23281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31848162 - 31848092
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||||  |||||||||||||||||||||||||||||||  |||| ||||| ||| || |||| ||||    
T  31848162 cttttgtcaattgtgttttgttcaaaatcatcattaaaagaggagaaatggggcaaaacatggggtgcaaa 31848092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 50574846 - 50574796
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  50574846 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 50574796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 51810467 - 51810417
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||||| || || ||||||||||||||||||||||||    
T  51810467 attaaaaattgatttattttggtcccttaatttctctctgttacacatttt 51810417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 52412927 - 52412877
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||    
T  52412927 attaaaatttgatttattttggtcccttaacttctctctgttacacatttt 52412877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 8108987 - 8109047
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||| ||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  8108987 aaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 8109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 22149706 - 22149750
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaa 197  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  22149706 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 17518609 - 17518653
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaag 198  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  17518609 aaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 46057152 - 46057092
Alignment:
Q  12 tgtgtttt-gttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||| |||||| |||| ||||    
T  46057152 tgtgttttagttcaaaatcatcattaaaagaggggaaagggggcaaaagatcgggtgcaaa 46057092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 47955353 - 47955306
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  47955353 aaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 47955306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 22149702 - 22149748
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  22149702 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 22149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1176980 - 1176934
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaa 47  Q
    |||||||||  |||||||||||||||||||| |||||||||| ||||    
T  1176980 cttttgtcaattgtgttttgttcaaaatcattattaaaagaggggaa 1176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 6181945 - 6181895
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  6181945 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 6181895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 16267772 - 16267822
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  16267772 attaaaatttgatttattttggtcccttaacttctctccgttacacatttt 16267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 17518349 - 17518303
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaa-gtgcaattaagcc 200  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  17518349 aaaatcgcacaattaacaaaagataaggggaaaggtgcaattaagcc 17518303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 22584408 - 22584458
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  22584408 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 22584458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 22584681 - 22584631
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  22584681 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 22584631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 32517662 - 32517712
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| ||||||||||  |||| ||| ||||||||||||||||||||    
T  32517662 attaaaattcgatttattttgattccttaacttctctctgttacacatttt 32517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 32564016 - 32564066
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||| |||||||||||||||    
T  32564016 attaaaatttgatttattttggtcccttaacttctttctgttacacatttt 32564066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 33753545 - 33753491
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagtc 255  Q
    ||||||||| |||||||||| || || ||| ||||||| ||||||||||||||||    
T  33753545 attaaaattcgatttattttggtcccttaacttctctccgttacacattttagtc 33753491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 34279570 - 34279520
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  34279570 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 34279520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 36885033 - 36884983
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| ||||| ||| || |||||||||||||||||    
T  36885033 attaaaattcgatttattttggttccttaacttatctctgttacacatttt 36884983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 37198989 - 37199039
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||| || || ||| |||| |||||||||||||||    
T  37198989 attaaaatttgatttattttggtcccttaacttctatctgttacacatttt 37199039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 41082956 - 41082907
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagccat 202  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||||    
T  41082956 aaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagccat 41082907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 41083218 - 41083264
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||    
T  41083218 aaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagcc 41083264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 47498346 - 47498300
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    ||||| |||||||| |||||  |||||||||||||||||||||||||    
T  47498346 aaaattgcacaattggcaaactatagggggaaagtgcaattaagcca 47498300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 48190831 - 48190770
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcca 201  Q
    |||||||| ||| |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  48190831 aaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcca 48190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 49291050 - 49291100
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||||||||||| ||| ||||||   |||||||||||    
T  49291050 attaaaatttgatttatttttgttccttaacttctcttcattacacatttt 49291100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 49291312 - 49291262
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || |||||||||| |||||||||||||    
T  49291312 attaaaattcgatttattttggtcccttaatttctctatgttacacatttt 49291262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 50574571 - 50574621
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  50574571 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 50574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 50921117 - 50921170
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacattttagt 254  Q
    ||||||||  |||||||||| || || | |||||||||||||||||||||||||    
T  50921117 attaaaatccgatttattttggtcccttgatttctctctgttacacattttagt 50921170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 10654356 - 10654308
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  10654356 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 10654308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 11394989 - 11394941
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatt 249  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||    
T  11394989 attaaaatttgatttattttggtcccttaacttctctccgttacacatt 11394941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 25088075 - 25088123
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  25088075 taaaattcgatttattttggtcccttaacttctctctgttacacatttt 25088123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 44911072 - 44911025
Alignment:
Q  155 aaaatcgcacaattagcaaaagata--gggggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||| |||  |||||||||||||||||||||    
T  44911072 aaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcc 44911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 47955615 - 47955662
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||    
T  47955615 aaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 47955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 49284456 - 49284409
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg--ggaaagtgcaattaagcc 200  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||    
T  49284456 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 49284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 8)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 439169 - 438999
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaagggg-ctaaagatagggtacaaa-tcggtcacnnnnnnnnng------tgc 92  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| |||          |      |||    
T  439169 cttttgtcaattgtgttttcttcaaaatcatcattaaaagagaggaaaagggggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaagatgc 439070  T
Q  93 aaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg-aaaatcgc 162  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  439069 aaaattgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcgc 438999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 183460 - 183514
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  183460 tgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggt 183514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 183544 - 183598
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaa 144  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaacacaa 183598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 438977 - 438929
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  438977 aaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcca 438929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 439206 - 439253
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  439206 aaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcc 439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 183670 - 183716
Alignment:
Q  156 aaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcc 200  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 438981 - 438935
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  438981 gtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 438935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 439203 - 439248
Alignment:
Q  90 tgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaatt 136  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||    
T  439203 tgcaaaatcgcacaattagc-aaaagataaggggaaaaagtgcaatt 439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 1299 - 1360
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1299 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgg 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1215 - 1269
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    ||||||||||||||||||||||||||||||| || ||| |||| |||||||||||    
T  1215 tgtgttttgttcaaaatcatcattaaaagagggggaaaagggcaaaagatagggt 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 1165 - 1117
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  1165 aaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcca 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 1427 - 1475
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagcca 201  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||    
T  1427 aaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcca 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 45686 - 45746
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatg 149  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  45686 gtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatg 45746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45622 - 45692
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||    
T  45622 cttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaa 45692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 45596 - 45537
Alignment:
Q  143 aaagatggagtg-aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    ||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45596 aaagagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 45537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 45814 - 45860
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  45814 aaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcc 45860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 1656 - 1595
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  1656 gtgcaaaatcgcacaattagcaaaaagataagagacaaaagtgcaattgaacacaaagatgg 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1751 - 1686
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggt 66  Q
    |||||| || |||||||||||| ||||||||||||||||||| ||||| ||||| ||| || ||||    
T  1751 cttttgccaactgtgttttgtttaaaatcatcattaaaagaggggaaatggggcaaaatatggggt 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 1791 - 1839
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccat 202  Q
    ||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  1791 aaaatcgcacaataaacaaaagatagggggaaaagtgcaattaaaccat 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 412090 - 412037
Alignment:
Q  95 aatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagat 148  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagat 412037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 411969 - 411923
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagcc 200  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||    
T  411969 aaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 17112 - 17062
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagata 62  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17112 tgtgttttgttcaaaatcatccttaaaagagaggaaaaggggctaaagata 17062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 17028 - 16963
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatggagtg 154  Q
    ||||||||||| ||||||||  |||||||| ||| |||||||||||||||||| ||||| ||||||    
T  17028 gtgcaaaatcgtacaattagagaaaagataggggacaaaagtgcaattgaacaaaaagacggagtg 16963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 17163 - 17219
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg-aaagtgcaattaagccattaaaattt 210  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  17163 aaaattgcacaattagcaaaagatagggggaaaagtgcaattaagccaatataattt 17219  T

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Target: scaffold0015; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 16896 - 16852
Alignment:
Q  157 aatcgcacaattagcaaaagatagggggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||    
T  16896 aatcgcacaattagcaaaagataggggaaaaaggcaattaagcca 16852  T

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Target: scaffold0598 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 6754 - 6815
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaacacaaagatgg 150  Q
    ||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  6754 gtgcaaaatcatagaattagcaaaaaaataaggggcaaaagtgcaattgaacacaaagatgg 6815  T

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Target: scaffold0598; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6690 - 6760
Alignment:
Q  1 cttttgtcatctgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtacaaa 71  Q
    |||||| || |||||||||||||||||||||||||||||||| || |||||||| | |||| |||| ||||    
T  6690 cttttgccaactgtgttttgttcaaaatcatcattaaaagagggggaaaggggcaagagatggggtgcaaa 6760  T

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Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 7607 - 7655
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggg-gaaagtgcaattaagccat 202  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  7607 aaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagccat 7655  T

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Target: scaffold0376; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 7501 - 7455
Alignment:
Q  155 aaaatcgcacaattagcaaaagatagggg-gaaagtgcaattaagcc 200  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  7501 aaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcc 7455  T

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Target: scaffold0376; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Original strand, 7522 - 7552
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagag 42  Q
    |||||||||||||||||||||||||||||||    
T  7522 tgtgttttgttcaaaatcatcattaaaagag 7552  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 10059 - 10005
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggg--aaagtgcaattaagccattaaaa 207  Q
    ||||||| |||||| |||||||||||||||  |||||||||||||||| ||||||    
T  10059 aaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcctttaaaa 10005  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 11270 - 11320
Alignment:
Q  201 attaaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    ||||||||| |||||||||| || || ||| ||||||||||||||||||||    
T  11270 attaaaattcgatttattttggtcccttaacttctctctgttacacatttt 11320  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 205733 - 205687
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggg-ggaaagtgcaattaagcc 200  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  205733 aaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagcc 205687  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 205781 - 205830
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagat 61  Q
    |||||||||||||||||||| || ||||||| ||||| ||||| ||||||    
T  205781 tgtgttttgttcaaaatcataatcaaaagaggggaaatggggcaaaagat 205830  T

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Target: scaffold0433 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 10720 - 10749
Alignment:
Q  12 tgtgttttgttcaaaatcatcattaaaaga 41  Q
    ||||||||||||||||||||||||||||||    
T  10720 tgtgttttgttcaaaatcatcattaaaaga 10749  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 6199 - 6151
Alignment:
Q  155 aaaatcgcacaattagcaaaagat--agggggaaagtgcaattaagcca 201  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||    
T  6199 aaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcca 6151  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 11727 - 11775
Alignment:
Q  203 taaaatttgatttatttttgttccataatttctctctgttacacatttt 251  Q
    |||||||||||||||||| || || ||| |||||| |||||||||||||    
T  11727 taaaatttgatttattttggtcccttaacttctctttgttacacatttt 11775  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 73138 - 73086
Alignment:
Q  89 gtgcaaaatcgcacaattagcaaaaagatacggggcaaaagtgcaattgaaca 141  Q
    ||||||||||||||| ||  |||||||||| ||| ||||||||||||| ||||    
T  73138 gtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaaca 73086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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