View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10742_low_38 (Length: 218)
Name: NF10742_low_38
Description: NF10742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10742_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 39720126 - 39720315
Alignment:
| Q |
17 |
agaaaaaagtcagtatggtggagacaacctcaaagtccagaaaaggtcactttcttaagccaaaaactggtttcatggggtgtgggagaaggagtgcatg |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39720126 |
agaaaaaagtcagtatggtggagacaacctcaaagtccagaaaaggtcactttcttaagccaaaaactggtttcatggggtgtgggagaaggagtgcatg |
39720225 |
T |
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| Q |
117 |
tatgagaaaataggtaattaacgaggatgaattattggcaaattgcaagcacactttgtgctatcccattccaaattttatgtacctttg |
206 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
39720226 |
tatgcgaaaataggtaattaacgaggatgaattattggcaaattgcaagcacactttgtgctatcccattccaaattttatgtaactttg |
39720315 |
T |
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