View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10743_3 (Length: 442)
Name: NF10743_3
Description: NF10743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10743_3 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 30 - 420
Target Start/End: Complemental strand, 4517320 - 4516930
Alignment:
| Q |
30 |
ccacacccttagaaagccatagattcaaactaaagggtcacctaaaattgaaagaaactatatagaaactccaaacatgcactcacaaaacaactaatat |
129 |
Q |
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| T |
4517320 |
ccacacccttagaaagccatagattcaaactaaagggtgacctaaaattgaaagaaactatatagaaactccaaacatgcactcacaaaacaactaatat |
4517221 |
T |
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| Q |
130 |
gtaatgattattcaaatcacaatatatagtctcacaacaatcttcatataccattcaaattttgagaagaggagaactcacataaacattgtatttgttt |
229 |
Q |
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| T |
4517220 |
gtaatgattattcaaatcacaatatatagtctcacaacaatcttcatgtaccattcaaattttgagaagaggagaactcacataaacattgtatttgttt |
4517121 |
T |
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| Q |
230 |
ctttatgtaatatcactttgtagtgaactcttgttctttattggatgaattttctctgctgttttgtagaaatttggccaaactgaaggatggattgttg |
329 |
Q |
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| T |
4517120 |
ctttatgtaatatcactttgtagtgaactcttgttctttattggatgaattttctctgctgttttgtagaaatttggccaaactgaaggatggattgttg |
4517021 |
T |
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| Q |
330 |
agagaattagtcattggattctgagaagaacttgatgaactcaacatttgatgataatgatggttgtggatttctctttgatgatgatgat |
420 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4517020 |
agagaattagtcattggattctgagaagaatttgatgaactcaacatttgatgataatgatggttgtggatttctctttgatgatgatgat |
4516930 |
T |
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