View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10743_8 (Length: 349)
Name: NF10743_8
Description: NF10743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10743_8 |
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Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 29 - 327
Target Start/End: Original strand, 39775429 - 39775727
Alignment:
| Q |
29 |
aattttgatcttacaagcgatgtttaattaagcatgaccgtactctactttaaggtatcatgctcttgtcgttataatgcctttcaatctattttgagtt |
128 |
Q |
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| T |
39775429 |
aattttgatcttacaagcgatgtttaattaagcatgaccgtactctactttaaggtatcatgctcttgtcgttataatgcctttcaatctattttgagtt |
39775528 |
T |
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| Q |
129 |
gtctcttgttggattgatcattgaaaacaaaaataatagcaatggttttattttgtggggtagtccttatttgatggatcgatggacatgaaatgtttgt |
228 |
Q |
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| T |
39775529 |
gtcccttgttggattgatcattgaaaacaaaaataatagcaatggttttattttgtggggtagtccttatttgatggatcgatggacatgaaatgtttgt |
39775628 |
T |
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| Q |
229 |
gcaattgtgctgcattatttggatacccaacccaacaaagttcctttgaataaatcatcatgaaaatgatttataccaataatcttcttgtctgatgat |
327 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39775629 |
gcaattgtgctgcattatttggatacccaacccaacaaagttcctttgaataaatcatcatgaaaatgatttataccaataatcttcttgtctgatgat |
39775727 |
T |
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