View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10744_4 (Length: 437)
Name: NF10744_4
Description: NF10744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10744_4 |
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Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 21 - 369
Target Start/End: Original strand, 17506650 - 17506985
Alignment:
| Q |
21 |
ccacttgcatttcatgcaatcaaagacaaaccttgtccagctcacgatgaagctccaaaagtgtaaaggatccaaaagaaaacgattgggtatatatagt |
120 |
Q |
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| T |
17506650 |
ccacttgcattgcatgcaatcaaagacaaaccttgtccagctcacgatgaagctccaaaagtgtaaaggatccaaaagaaaacgattgggtatatatatt |
17506749 |
T |
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| Q |
121 |
ttggcctttcaaaaataaaaatttcaggtcattccagaaaagggtgaattaagattgtgaattaaaggtttgaaaaatgaaaacgtggttacattacgtc |
220 |
Q |
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| T |
17506750 |
ttggcctttcaaaaaaaa----ttcaggtcattccagaaaagggtgaattaagattgtgaattaatggtttgaaaaatgaaaacgtggttacattacgtc |
17506845 |
T |
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| Q |
221 |
cataacttacttgcattaattgtgatgaacatgttattgaatcaagtggttcagaactataatcttactataatcttgctgaattgtatgaacatattct |
320 |
Q |
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| T |
17506846 |
cataacttacttgcattaattgtgatgaacatgttattgaatcaagtggttcagaacta---------tataatcttgctgaattgtatgaacatattct |
17506936 |
T |
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| Q |
321 |
ctttccttaatcgtataaccccactattttatatacatatatagtacac |
369 |
Q |
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| T |
17506937 |
cattccttaatcgtataaccccactattttatatacatatatagtacac |
17506985 |
T |
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