View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10745_low_10 (Length: 333)
Name: NF10745_low_10
Description: NF10745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10745_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 1313448 - 1313771
Alignment:
| Q |
1 |
caagactcaaaaattacactatacactaaaaaagttataatttttgcagcgaagttttatgtgaatcaactcgatttttatggtgatgataggttgttgg |
100 |
Q |
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| T |
1313448 |
caagactcaaaaattacactatac--taaaaaagttatcacttttgcagcgaagttttatgtgaatcaactcgatttttatggtgataatagtctgttgg |
1313545 |
T |
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| Q |
101 |
tatcgagtcatcattgcatttgcatgtaacgaagaaaaaactactgcttattacattccatactatatactttgagagggcattcttgaaaaatatattc |
200 |
Q |
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| T |
1313546 |
tatcgagtcatcattgcatttgcatgtaaggaagaaaaaactactgcttattacattccatactatatactttgagagggcattcttgaaaaatatattc |
1313645 |
T |
|
| Q |
201 |
aatactatacaaaaaggaattnnnnnnntatgtagcggtagttgtgaaggcaaaagttgtatgagcacatgcaaactgtccaaggatagggagggacgta |
300 |
Q |
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||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
1313646 |
aatactatagaaaaaggaattaaaaaaatatgtagcggtggctgtgaaggcaaaagttgtatgagcacatgcaaactgtccaa-gatagggagggacgta |
1313744 |
T |
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| Q |
301 |
aaaacacacgtttgggattcatctcac |
327 |
Q |
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|||||||||||||||||||||| |||| |
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| T |
1313745 |
aaaacacacgtttgggattcatatcac |
1313771 |
T |
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