View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10745_low_38 (Length: 239)
Name: NF10745_low_38
Description: NF10745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10745_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 47832360 - 47832589
Alignment:
| Q |
1 |
atttaattctttatatatgccatttgtttagtggaagaacttaaaacgtagaatattgttatggccagattaatatatatgtagatattgacatttaaag |
100 |
Q |
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| T |
47832360 |
atttaattctttatatatgccatttgtttagtggaagaacttaaaacgtacaatattgttatggccagattaatatatatgtagatattgacatttaaag |
47832459 |
T |
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| Q |
101 |
atgacatat----gtgtggtaagtggtaacatatataccatatacaatgcttgttaccacatgtacaatagatcattttcttatacaacaatttgttcat |
196 |
Q |
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| T |
47832460 |
atgacatatatatgtgtggtaagtggtaacatatataccatatacaatgcttgttaccacatgtacaagagatcattttcttatacaacaatttgttcat |
47832559 |
T |
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| Q |
197 |
taataattggaattgagaccgatgaatttg |
226 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
47832560 |
taataattggaattgagaccgatgaatttg |
47832589 |
T |
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