View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10745_low_44 (Length: 220)
Name: NF10745_low_44
Description: NF10745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10745_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 42056220 - 42056400
Alignment:
| Q |
18 |
cacagagaaagtggtagaacacacaagtacctacttccaaagaaaaatcccaccaataaaatgtattaactatctatctcaaatatgattacaacaattg |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42056220 |
cacagagaaagtggtagaacacacaagtacctacttccaaagaaaaatcccaccaataaaatgtattaactatctatctcaaatatgattacaacaattg |
42056319 |
T |
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| Q |
118 |
taacttatctatcccaaactgtgcaacaacctataaacttgaataccagggtcaagagttacaaatcgtgaagacactcgc |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42056320 |
taacttatctatcccaaactgtgcaacaacctataaacttgaataccagggtcaagagttacaaatcgtgaagacactcgc |
42056400 |
T |
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