View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10745_low_8 (Length: 357)

Name: NF10745_low_8
Description: NF10745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10745_low_8
NF10745_low_8
[»] chr5 (21 HSPs)
chr5 (222-350)||(2566446-2566574)
chr5 (18-108)||(2566565-2566655)
chr5 (122-184)||(16773860-16773922)
chr5 (123-184)||(29173543-29173604)
chr5 (122-184)||(30000169-30000231)
chr5 (122-173)||(16288361-16288412)
chr5 (122-184)||(17028225-17028287)
chr5 (126-176)||(18437146-18437196)
chr5 (122-184)||(21589341-21589403)
chr5 (122-184)||(29075834-29075896)
chr5 (123-172)||(4793042-4793091)
chr5 (122-173)||(12877757-12877808)
chr5 (123-178)||(18206608-18206663)
chr5 (122-184)||(6844782-6844844)
chr5 (122-184)||(28285305-28285367)
chr5 (193-222)||(21589287-21589316)
chr5 (145-178)||(26078035-26078068)
chr5 (123-184)||(29210411-29210472)
chr5 (138-178)||(12669531-12669571)
chr5 (123-163)||(17877122-17877162)
chr5 (140-184)||(35360065-35360109)
[»] chr1 (28 HSPs)
chr1 (123-184)||(3799959-3800020)
chr1 (122-184)||(21547441-21547503)
chr1 (122-184)||(24047063-24047125)
chr1 (130-185)||(40814377-40814432)
chr1 (122-168)||(1094594-1094640)
chr1 (122-184)||(6122847-6122909)
chr1 (122-184)||(12587323-12587384)
chr1 (126-184)||(12662335-12662393)
chr1 (122-180)||(44126452-44126510)
chr1 (123-173)||(44961829-44961879)
chr1 (123-184)||(33700735-33700796)
chr1 (123-184)||(50901635-50901695)
chr1 (145-184)||(8177166-8177205)
chr1 (122-184)||(17745218-17745279)
chr1 (122-184)||(29753702-29753764)
chr1 (130-184)||(51814547-51814601)
chr1 (123-173)||(52116743-52116793)
chr1 (138-179)||(8077697-8077738)
chr1 (138-179)||(9500461-9500502)
chr1 (138-179)||(15059508-15059549)
chr1 (138-179)||(18646903-18646944)
chr1 (123-184)||(25494031-25494092)
chr1 (123-184)||(27476733-27476794)
chr1 (138-178)||(19034492-19034532)
chr1 (193-221)||(19528375-19528403)
chr1 (138-178)||(25237095-25237135)
chr1 (193-221)||(40257399-40257427)
chr1 (192-220)||(44126396-44126424)
[»] chr3 (29 HSPs)
chr3 (130-214)||(13448346-13448430)
chr3 (138-184)||(36720434-36720480)
chr3 (122-184)||(2667915-2667977)
chr3 (122-184)||(8075088-8075150)
chr3 (122-184)||(44743816-44743878)
chr3 (122-184)||(52769944-52770006)
chr3 (122-173)||(14339674-14339725)
chr3 (122-184)||(10445100-10445162)
chr3 (122-184)||(47454578-47454640)
chr3 (125-177)||(9832545-9832597)
chr3 (130-182)||(30510168-30510220)
chr3 (145-184)||(37788449-37788488)
chr3 (122-184)||(4844472-4844534)
chr3 (122-184)||(4870168-4870230)
chr3 (183-224)||(203087-203128)
chr3 (192-221)||(5499454-5499483)
chr3 (138-179)||(15566605-15566646)
chr3 (123-184)||(25035758-25035819)
chr3 (138-179)||(25289820-25289861)
chr3 (123-168)||(45699890-45699935)
chr3 (138-179)||(49258368-49258409)
chr3 (123-171)||(4222207-4222255)
chr3 (193-221)||(8051214-8051242)
chr3 (193-221)||(10499157-10499185)
chr3 (122-178)||(10969878-10969934)
chr3 (193-221)||(24459990-24460018)
chr3 (138-178)||(32151475-32151515)
chr3 (138-178)||(40777071-40777111)
chr3 (138-178)||(46552990-46553030)
[»] chr7 (28 HSPs)
chr7 (122-184)||(21558181-21558243)
chr7 (122-184)||(30579388-30579450)
chr7 (123-185)||(37085511-37085573)
chr7 (122-176)||(42261006-42261060)
chr7 (123-183)||(48983695-48983755)
chr7 (122-173)||(43590971-43591022)
chr7 (122-184)||(17040973-17041035)
chr7 (122-184)||(27313695-27313757)
chr7 (122-184)||(37473667-37473729)
chr7 (122-179)||(45228986-45229043)
chr7 (123-179)||(41975945-41976001)
chr7 (145-184)||(25655212-25655251)
chr7 (129-184)||(37117122-37117177)
chr7 (122-184)||(2446361-2446423)
chr7 (145-179)||(27312206-27312240)
chr7 (123-173)||(33181172-33181222)
chr7 (122-184)||(41487412-41487474)
chr7 (122-184)||(41519226-41519287)
chr7 (130-184)||(42712011-42712065)
chr7 (192-221)||(23301649-23301678)
chr7 (123-184)||(48771991-48772052)
chr7 (122-178)||(4572258-4572314)
chr7 (122-178)||(11720921-11720977)
chr7 (122-178)||(15905635-15905691)
chr7 (195-223)||(27776170-27776198)
chr7 (193-221)||(30579335-30579363)
chr7 (138-178)||(36173090-36173130)
chr7 (193-221)||(41487362-41487390)
[»] scaffold0258 (1 HSPs)
scaffold0258 (122-184)||(15284-15346)
[»] chr8 (20 HSPs)
chr8 (122-184)||(6536573-6536635)
chr8 (122-184)||(7347890-7347952)
chr8 (122-184)||(16852393-16852455)
chr8 (123-184)||(968415-968476)
chr8 (122-185)||(31088725-31088788)
chr8 (122-184)||(11819829-11819891)
chr8 (126-184)||(19703452-19703510)
chr8 (123-184)||(23874345-23874405)
chr8 (123-184)||(31408084-31408145)
chr8 (145-184)||(13129721-13129760)
chr8 (130-169)||(28560674-28560713)
chr8 (123-178)||(40872935-40872990)
chr8 (122-168)||(8485068-8485114)
chr8 (122-184)||(18540351-18540413)
chr8 (130-184)||(23361618-23361672)
chr8 (183-221)||(40872876-40872914)
chr8 (130-184)||(43594287-43594341)
chr8 (123-184)||(33727835-33727896)
chr8 (125-169)||(3129828-3129872)
chr8 (124-168)||(3305151-3305195)
[»] chr6 (18 HSPs)
chr6 (122-184)||(24641151-24641213)
chr6 (122-185)||(1056646-1056709)
chr6 (123-182)||(12234469-12234528)
chr6 (122-172)||(18263905-18263955)
chr6 (123-184)||(33549157-33549218)
chr6 (145-184)||(12188287-12188326)
chr6 (122-173)||(20213105-20213156)
chr6 (122-169)||(21418538-21418585)
chr6 (122-173)||(22107128-22107179)
chr6 (123-169)||(1992209-1992255)
chr6 (123-181)||(3715508-3715566)
chr6 (122-184)||(8597708-8597770)
chr6 (122-168)||(11103396-11103442)
chr6 (122-176)||(16535245-16535299)
chr6 (122-184)||(18562599-18562661)
chr6 (122-183)||(6758383-6758444)
chr6 (138-179)||(11448921-11448962)
chr6 (125-181)||(30127456-30127512)
[»] chr4 (34 HSPs)
chr4 (122-184)||(7949415-7949477)
chr4 (122-179)||(47386752-47386809)
chr4 (130-182)||(22096577-22096629)
chr4 (122-169)||(12793872-12793919)
chr4 (122-184)||(9693459-9693521)
chr4 (122-184)||(13483068-13483129)
chr4 (122-184)||(28635749-28635811)
chr4 (122-184)||(30938180-30938242)
chr4 (130-184)||(37443752-37443806)
chr4 (130-184)||(39509123-39509177)
chr4 (130-175)||(19531971-19532016)
chr4 (138-179)||(43719171-43719212)
chr4 (130-179)||(49262653-49262702)
chr4 (123-178)||(3606984-3607039)
chr4 (145-184)||(23378009-23378048)
chr4 (123-174)||(23491991-23492042)
chr4 (130-184)||(4185146-4185200)
chr4 (130-168)||(29312233-29312271)
chr4 (122-184)||(37274420-37274482)
chr4 (130-176)||(41683810-41683856)
chr4 (122-184)||(49938797-49938859)
chr4 (122-184)||(52254365-52254427)
chr4 (138-179)||(34844864-34844905)
chr4 (138-179)||(40058958-40058999)
chr4 (138-179)||(49287908-49287949)
chr4 (123-184)||(51948533-51948594)
chr4 (123-184)||(51969070-51969131)
chr4 (145-173)||(7292782-7292810)
chr4 (193-221)||(9241073-9241101)
chr4 (156-184)||(12798737-12798765)
chr4 (193-221)||(19238625-19238653)
chr4 (122-154)||(40283947-40283979)
chr4 (193-221)||(51250570-51250598)
chr4 (193-221)||(55427248-55427276)
[»] chr2 (15 HSPs)
chr2 (122-182)||(25637206-25637266)
chr2 (122-184)||(33582026-33582088)
chr2 (124-173)||(37971959-37972008)
chr2 (126-184)||(11251140-11251198)
chr2 (123-181)||(16951434-16951492)
chr2 (123-181)||(17022099-17022157)
chr2 (130-184)||(23052492-23052546)
chr2 (183-221)||(34041626-34041664)
chr2 (130-184)||(39715045-39715099)
chr2 (123-184)||(21195638-21195699)
chr2 (139-184)||(33569836-33569881)
chr2 (130-179)||(39764991-39765040)
chr2 (130-178)||(19244168-19244216)
chr2 (122-178)||(21303955-21304011)
chr2 (193-221)||(37480075-37480103)
[»] scaffold0008 (1 HSPs)
scaffold0008 (123-181)||(49362-49420)
[»] scaffold0074 (1 HSPs)
scaffold0074 (123-184)||(45721-45782)
[»] scaffold0115 (1 HSPs)
scaffold0115 (122-169)||(42625-42672)
[»] scaffold0300 (1 HSPs)
scaffold0300 (122-178)||(4399-4455)
[»] scaffold0172 (1 HSPs)
scaffold0172 (193-221)||(32817-32845)
[»] scaffold0032 (1 HSPs)
scaffold0032 (123-171)||(112348-112396)


Alignment Details
Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 2566574 - 2566446
Alignment:
Q  222 caacatcacatttacttgtttaagataaggcggcgtttcacatgtcaattcaggtaactgggtcacactacacaaatcaactcttatgcgtaatgggatg 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  2566574 caacatcacatttacttgtttaagataaggcggcgtttcacatgtcaattcaggtaactaggtcacactacacaaatcaactcttgtgcgcaatgggatg 2566475  T
Q  322 atttaagctcaatttaccacctatccctt 350  Q
    |||||||||||||||||||||||| ||||    
T  2566474 atttaagctcaatttaccacctattcctt 2566446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 2566655 - 2566565
Alignment:
Q  18 acattatattgaaaactaaagtctcacattgaaaataaataagatttgagaaaaatttatataatcgcattctattcaaaacaacatcaca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  2566655 acattatattgaaaactaaagtctcacattgaaaataaataagatctgagaaatatttatataatcgtattctattcaaaacaacatcaca 2566565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 16773922 - 16773860
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgagga 16773860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 29173604 - 29173543
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgagga 29173543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 30000231 - 30000169
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||| ||||| ||||||||||  ||||||| |||||||||| ||||||||||    
T  30000231 gaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgagga 30000169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 16288361 - 16288412
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||    
T  16288361 gaagaagttaaattagcctacctaaattggtactagagagaattgaacctga 16288412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 17028225 - 17028287
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||||| ||||||| |||| |||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgagga 17028287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 18437196 - 18437146
Alignment:
Q  126 aagttaaattaccccacctaaattggcactagagagaatcgaacctgaaac 176  Q
    |||||||||||  ||| |||||||||||||||||||||||||||| |||||    
T  18437196 aagttaaattagtccatctaaattggcactagagagaatcgaacccgaaac 18437146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 21589403 - 21589341
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || ||||||||||||||||| |||| ||||||||||||| || |||||||    
T  21589403 gaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgagga 21589341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 29075896 - 29075834
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||| |||||||||||| |||||||||||||| ||| | ||||||||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgagga 29075834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 4793042 - 4793091
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctg 172  Q
    |||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  4793042 aagaagctaaattagcccacctaaattggcactggggagaatcgaacctg 4793091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 12877808 - 12877757
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||| ||||||| |||||||||||| | || ||||||||||||||||||    
T  12877808 gaagaagctaaattagcccacctaaattagtaccagagagaatcgaacctga 12877757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 18206608 - 18206663
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| ||||||| |||||| |||||||||||||||||| ||||| ||| |||||    
T  18206608 aagaagctaaattagcccacccaaattggcactagagagagtcgaatctggaacct 18206663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 6844844 - 6844782
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| ||  |||||||||||||||| ||||| |||||||||| | ||||||||||    
T  6844844 gaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgagga 6844782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 28285367 - 28285305
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||| ||||||| ||||||||||| || |||| |||||    
T  28285367 gaagaagctaaattagcccacccaaattgacactagaaagaatcgaacccgataccttgagga 28285305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 21589316 - 21589287
Alignment:
Q  193 caataccaccaggccaacccaagtgggttc 222  Q
    ||||||||||||||||||||||||||||||    
T  21589316 caataccaccaggccaacccaagtgggttc 21589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 26078035 - 26078068
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||||||||||||||||||||||||| ||||    
T  26078035 aaattggcactagagagaatcgaacctgagacct 26078068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 29210472 - 29210411
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| |||||||  ||||||||||||  || ||||||||| |||| ||||||||||||||    
T  29210472 aagaagctaaattagtccacctaaattgataccagagagaattgaacttgaaacctcgagga 29210411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 12669571 - 12669531
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||||||||| ||| |||||||||||||| ||||||||    
T  12669571 cccacctaaattgacaccagagagaatcgaacttgaaacct 12669531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 17877122 - 17877162
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaa 163  Q
    |||||||||||||| ||||||||||||| ||| ||||||||    
T  17877122 aagaagttaaattagcccacctaaattgacaccagagagaa 17877162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 35360065 - 35360109
Alignment:
Q  140 cacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||||||  | ||||||||||||||| ||||||||||    
T  35360065 cacctaaattggcaccggtgagaatcgaacctgagacctcgagga 35360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 3800020 - 3799959
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3800020 aagaagctaaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgagga 3799959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 21547441 - 21547503
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||    
T  21547441 gaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgagga 21547503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 24047063 - 24047125
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||| || ||||||||||||||| | ||||||||||| ||||||||||||||    
T  24047063 gaagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgagga 24047125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 40814377 - 40814432
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgaggat 185  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  40814377 taaattagcccacttaaattgacactagagagaatcgaacctgaaacctcaaggat 40814432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 1094640 - 1094594
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaa 168  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||    
T  1094640 gaagaagttaaattagcccacctaaattggcaccggagagaatcgaa 1094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 6122909 - 6122847
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||| |||||    
T  6122909 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagga 6122847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 12587384 - 12587323
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  12587384 gaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgagga 12587323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 12662393 - 12662335
Alignment:
Q  126 aagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||  ||||||||||||||| |||||| |||||||||||| || |||||||    
T  12662393 aagttaaattagtccacctaaattggcattagagataatcgaacctgagacatcgagga 12662335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 44126510 - 44126452
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcg 180  Q
    ||||||| ||||||| || ||||||||||||||||||||||||| || |||| ||||||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcg 44126452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 44961879 - 44961829
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctga 44961829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 33700735 - 33700796
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||| || ||| | ||||||||||| |||||||||||||||||| |||| |||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgagga 33700796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 50901695 - 50901635
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||  ||| ||||||||||    
T  50901695 aagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgagga 50901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 8177166 - 8177205
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgagga 8177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 17745218 - 17745279
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| || |||||||||| ||| |||||||||||||| ||| ||||||||||    
T  17745218 gaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgagga 17745279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 29753764 - 29753702
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || ||| | ||||||||||| |||||||||||||||||| |||| |||||    
T  29753764 gaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgagga 29753702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 51814601 - 51814547
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||||| ||||||||||  ||||||||||||||||| |||| |||||    
T  51814601 taaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgagga 51814547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 52116743 - 52116793
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    |||||| ||||||| ||||||| |||||||||||| |||||| ||||||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctga 52116793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 8077738 - 8077697
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  8077738 cccaccgaaattggcaccagagagaatcgaacctgagacctc 8077697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 9500461 - 9500502
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  9500461 cccaccgaaattggcaccagagagaatcgaacctgagacctc 9500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 15059508 - 15059549
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  15059508 cccaccgaaattggcaccagagagaatcgaacctgagacctc 15059549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 18646944 - 18646903
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  18646944 cccaccgaaattggcaccagagagaatcgaacctgagacctc 18646903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 25494031 - 25494092
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||||| |||| |||||||| |||||| ||||| |||||  || ||||||||||    
T  25494031 aagaagttaaattagcccatctaaattgtcactagggagaagcgaactcgagacctcgagga 25494092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 27476733 - 27476794
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| ||||||||||| ||||| |||||||||| ||| ||| | ||||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgagga 27476794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 19034492 - 19034532
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| |||||||||| ||||| |||||||||||||||||    
T  19034492 cccaccgaaattggcaccagagataatcgaacctgaaacct 19034532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 19528375 - 19528403
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  19528375 caataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 25237095 - 25237135
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| ||||||||||||||| ||||||||||||| ||||    
T  25237095 cccaccgaaattggcactagagggaatcgaacctgagacct 25237135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 40257427 - 40257399
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  40257427 caataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 44126424 - 44126396
Alignment:
Q  192 tcaataccaccaggccaacccaagtgggt 220  Q
    |||||||||||||||||||||||||||||    
T  44126424 tcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 13448430 - 13448346
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgaggatcctaaatcaataccaccaggccaacccaa 214  Q
    ||||||| ||||||||||||| || |||||| ||| |||||||| ||||||||||| |||  |||||||||||||||||||||||    
T  13448430 taaattagcccacctaaattgacagtagagaaaattgaacctgagacctcgaggattctacgtcaataccaccaggccaacccaa 13448346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 36720480 - 36720434
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  36720480 cccacctaaattgacactagagagaatcgaacctgaaacctcgagga 36720434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 2667977 - 2667915
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || ||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  2667977 gaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgagga 2667915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8075088 - 8075150
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||| |||||||| |||||||||||||||||| |||||    
T  8075088 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgagga 8075150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 44743816 - 44743878
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||||||    
T  44743816 gaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgagga 44743878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 52769944 - 52770006
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| ||||| |||||||||||||||| ||||| ||||    
T  52769944 gaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaagga 52770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 14339725 - 14339674
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||||||||||    
T  14339725 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctga 14339674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 10445100 - 10445162
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||  ||||| |||| |||||||||||||||||| ||||||||||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgagga 10445162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 47454578 - 47454640
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || |||||||||||||||| | | ||||||||||||||| ||||||||||    
T  47454578 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgagga 47454640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 9832597 - 9832545
Alignment:
Q  125 gaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacc 177  Q
    |||| |||||||||||||| ||||||||||||||  ||||||||| |||||||    
T  9832597 gaagctaaattaccccacccaaattggcactagaaggaatcgaacatgaaacc 9832545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 30510168 - 30510220
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgag 182  Q
    ||||||| ||||| || |||| |||||||||||||||||||||| ||||||||    
T  30510168 taaattagcccacttagattgacactagagagaatcgaacctgagacctcgag 30510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 37788449 - 37788488
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  37788449 aaattggcactagagagaatcgaacctgagaccttgagga 37788488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 4844472 - 4844534
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||  ||||||||||  ||||||||||| ||||| ||||||||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgagga 4844534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 4870168 - 4870230
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||  ||||||||||  ||||||||||| ||||| ||||||||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgagga 4870230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 203128 - 203087
Alignment:
Q  183 gatcctaaatcaataccaccaggccaacccaagtgggttcaa 224  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  203128 gatcccaagtcaataccactaggccaacccaagtgggttcaa 203087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 5499454 - 5499483
Alignment:
Q  192 tcaataccaccaggccaacccaagtgggtt 221  Q
    ||||||||||||||||||||||||||||||    
T  5499454 tcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 15566605 - 15566646
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| ||||||||||||||| ||||||||||||| |||||    
T  15566605 cccaccgaaattggcactagagggaatcgaacctgagacctc 15566646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 25035819 - 25035758
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| |||||| |||||| |||  | ||||||||||||||||| ||||||||    
T  25035819 aagaaggtaaattaacccacccaaattgacaccggtgagaatcgaacctgaaatctcgagga 25035758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 25289820 - 25289861
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| ||||||||||||||| ||||||||||||| |||||    
T  25289820 cccaccgaaattggcactagagggaatcgaacctgagacctc 25289861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 45699890 - 45699935
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaa 168  Q
    |||||||||||||| ||||| |||||||||||  ||||||||||||    
T  45699890 aagaagttaaattagcccacttaaattggcacacgagagaatcgaa 45699935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 49258368 - 49258409
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| ||||||||||||||| ||||||||||||| |||||    
T  49258368 cccaccgaaattggcactagagggaatcgaacctgagacctc 49258409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 4222255 - 4222207
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacct 171  Q
    ||||||||||| || | ||||||||||| ||| ||||||||||||||||    
T  4222255 aagaagttaaactaactcacctaaattgacaccagagagaatcgaacct 4222207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 8051242 - 8051214
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  8051242 caataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 10499157 - 10499185
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  10499157 caataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 10969878 - 10969934
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| |||| || ||| | ||||||||||| |||||||||||||||||| ||||    
T  10969878 gaagaagctaaactaacccccttaaattggcaccagagagaatcgaacctgagacct 10969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 24460018 - 24459990
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  24460018 caataccaccaggccaacccaagtgggtt 24459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 32151515 - 32151475
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| ||||||||||||||||||||||||  ||||||||    
T  32151515 cccaccgaaattggcactagagagaatcgaatttgaaacct 32151475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 40777111 - 40777071
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| ||||||||||||||||||||| ||||||| ||||    
T  40777111 cccaccgaaattggcactagagagaatcaaacctgagacct 40777071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 46553030 - 46552990
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| |||||||||||||||||||||||| |||| ||||    
T  46553030 cccacccaaattggcactagagagaatcgaatctgagacct 46552990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 21558243 - 21558181
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgagga 21558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 30579450 - 30579388
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgagga 30579388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 37085511 - 37085573
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgaggat 185  Q
    |||||||||||||| ||||| |||||||| | | | |||||||||||||||||||||||||||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggat 37085573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 42261006 - 42261060
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaac 176  Q
    ||||||| |||| || |||||||||||||||||||||||||||| ||||||||||    
T  42261006 gaagaagctaaactaacccacctaaattggcactagagagaatcaaacctgaaac 42261060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 48983695 - 48983755
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagg 183  Q
    |||||||||||||| |||||| |||||| |||||||| ||||||||||||| |||| ||||    
T  48983695 aagaagttaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagg 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 43591022 - 43590971
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||||||||||    
T  43591022 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctga 43590971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 17040973 - 17041035
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||  |||||| ||||||||||| ||||||||||||||||| |||| |||||    
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgagga 17041035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 27313695 - 27313757
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| | ||||||||||||||  ||||||||||||| ||||||||| |||||    
T  27313695 gaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgagga 27313757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 37473729 - 37473667
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| || ||| ||||||||||||||| ||||| ||||    
T  37473729 gaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaagga 37473667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 45228986 - 45229043
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    ||||||| ||||||| ||||| ||||||| |||| ||||||||||||||| |||||||    
T  45228986 gaagaagctaaattagcccacttaaattgacactggagagaatcgaacctaaaacctc 45229043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 41976001 - 41975945
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||| ||| |||||    
T  41976001 aagaagctaaattagcccacttaaattgacactagagagaatcgaacttgagacctc 41975945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 25655212 - 25655251
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  25655212 aaattggcaccagagagaatcgaacctgaaaccttgagga 25655251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 37117122 - 37117177
Alignment:
Q  129 ttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||  ||||||||||||||||  |||||||||||||| |||||||| ||||    
T  37117122 ttaaattagtccacctaaattggcaccggagagaatcgaacccgaaacctcaagga 37117177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 2446423 - 2446361
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||| |||||  ||||||||||||| ||| | ||||||||    
T  2446423 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgagga 2446361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 27312240 - 27312206
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctc 179  Q
    ||||||||||||||| |||||||||||||||||||    
T  27312240 aaattggcactagagggaatcgaacctgaaacctc 27312206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 33181172 - 33181222
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    |||||| ||||||| |||||| |||||| |||||||| |||||||||||||    
T  33181172 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctga 33181222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 41487474 - 41487412
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||||||||||||||  |  |||||||||||||| |||| |||||    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgagga 41487412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 41519226 - 41519287
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| ||| |||||||| ||||||||| |||| |||||    
T  41519226 gaagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgagga 41519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 42712065 - 42712011
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||| |||| |||||    
T  42712065 taaattagcccacctaaattgacactagggagaatcgaacatgagaccttgagga 42712011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 23301649 - 23301678
Alignment:
Q  192 tcaataccaccaggccaacccaagtgggtt 221  Q
    ||||||||||||||||||||||||||||||    
T  23301649 tcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 48772052 - 48771991
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| |||||||||||||| ||| | || |||||||||||| ||||| ||||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaagga 48771991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 4572258 - 4572314
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| ||||||| |||||| |||||| |||  ||||||||||||||||| ||||    
T  4572258 gaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgagacct 4572314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 11720921 - 11720977
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| ||||||| |||||| ||||||||||| | |||||||||| |||| ||||    
T  11720921 gaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgatacct 11720977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 15905635 - 15905691
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| ||||||| |||||| |||||| || ||| ||||||||||||||| ||||    
T  15905635 gaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagacct 15905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 27776198 - 27776170
Alignment:
Q  195 ataccaccaggccaacccaagtgggttca 223  Q
    |||||||||||||||||||||||||||||    
T  27776198 ataccaccaggccaacccaagtgggttca 27776170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 30579363 - 30579335
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  30579363 caataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 36173130 - 36173090
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||| |||||||||| |||| ||||||||||||||||||    
T  36173130 cccaccaaaattggcacaagagggaatcgaacctgaaacct 36173090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 41487390 - 41487362
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  41487390 caataccaccaggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 15284 - 15346
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||   ||||||||||||||||| ||||||||||    
T  15284 gaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgagga 15346  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 6536635 - 6536573
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||| |||||||| |||| |||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgagga 6536573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 7347952 - 7347890
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  7347952 gaagaagctaaattagcccacctaaattgacacaagagagaattgaacctgaaacctcaagga 7347890  T

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Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 16852455 - 16852393
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgagga 16852393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 968476 - 968415
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| ||||||||||||||||   ||||||||||||||||| ||||||||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgagga 968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 31088788 - 31088725
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgaggat 185  Q
    ||||||||||||||| || ||||||||||| |  |||||||||| ||||||| |||||||||||    
T  31088788 gaagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacctcgaggat 31088725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 11819891 - 11819829
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||| |||||    
T  11819891 gaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgagga 11819829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 19703452 - 19703510
Alignment:
Q  126 aagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||| ||||||| ||||| |||||| ||||||||||||||| |||| |||||    
T  19703452 aagttaaattagcccaccttaattgacactagggagaatcgaacctgagaccttgagga 19703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 23874345 - 23874405
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||||| ||||||||||||| ||||||  |||| ||||||||| ||||||||||    
T  23874345 aagaagttaaattagcccacctaaattgtcactaggaagaa-cgaacctgagacctcgagga 23874405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 31408084 - 31408145
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| ||| | ||||||| || |||||||||||||||||||||||| |||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgagga 31408145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 13129760 - 13129721
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  13129760 aaattggcaccagagagaatcgaacctgaaaccttgagga 13129721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 28560713 - 28560674
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaac 169  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  28560713 taaattaacccacctaaattagcactagagagaatcgaac 28560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 40872990 - 40872935
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||||||| || |||||||||||||||||  |||||||| |||||| ||||||    
T  40872990 aagaagttaaactagcccacctaaattggcaccggagagaatggaacctaaaacct 40872935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 8485114 - 8485068
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaa 168  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||    
T  8485114 gaagaagctaaattagcccacctaaattggcaccggagagaatcgaa 8485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 18540413 - 18540351
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||| |  |||||||||| |||||||||||||||||| |||| |||||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgagga 18540351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 23361618 - 23361672
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||||||||| ||| ||||||||| |||||||| |||| |||||    
T  23361618 taaattagcccacctaaattgacaccagagagaattgaacctgagaccttgagga 23361672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 40872914 - 40872876
Alignment:
Q  183 gatcctaaatcaataccaccaggccaacccaagtgggtt 221  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  40872914 gatcctaaatcaatatcaccatgccaacccaagtgggtt 40872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 43594287 - 43594341
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| | |||||| |||||||||||||||||||||| |||| |||||    
T  43594287 taaattagcccatccaaattgacactagagagaatcgaacctgagaccttgagga 43594341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 33727835 - 33727896
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| |||| | |||||| |||||||| ||||||||||||| |||| |||||    
T  33727835 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgagga 33727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 3129828 - 3129872
Alignment:
Q  125 gaagttaaattaccccacctaaattggcactagagagaatcgaac 169  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||    
T  3129828 gaagctaaattagcccacttaaattgacactagagagaatcgaac 3129872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3305151 - 3305195
Alignment:
Q  124 agaagttaaattaccccacctaaattggcactagagagaatcgaa 168  Q
    ||||| ||||||| ||||||||||||||||| ||||| |||||||    
T  3305151 agaagataaattagcccacctaaattggcaccagagataatcgaa 3305195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 24641151 - 24641213
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||| |||||||||||||||| |   ||||||||||||| ||||||||||||    
T  24641151 gaagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgagga 24641213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 1056646 - 1056709
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgaggat 185  Q
    ||||||| ||||||| ||||||||| ||||||| |||||||||||||| | |||||| ||||||    
T  1056646 gaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggat 1056709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 12234469 - 12234528
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgag 182  Q
    |||||| ||||||| |||| |||||||| |||| ||||||||||||||||| ||||||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgag 12234528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 18263955 - 18263905
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctg 172  Q
    ||||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  18263955 gaagaagctaaattagcccacctaaattggcactggggagaatcgaacctg 18263905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 33549218 - 33549157
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| | ||||||||||||||   ||||||||||||||||| ||||||||||    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgagga 33549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 12188287 - 12188326
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  12188287 aaattggcactagagagaatcgaacttgaaaccttgagga 12188326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 20213156 - 20213105
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||| ||||||| |||||| |||||| |||||||| |||||||||||||    
T  20213156 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctga 20213105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 21418585 - 21418538
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaac 169  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||||||    
T  21418585 gaagaagctaaattagcccaccttaattggcactagggagaatcgaac 21418538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 22107179 - 22107128
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||||| ||||||| |||||| |||||| |||||||| |||||||||||||    
T  22107179 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctga 22107128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 1992209 - 1992255
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaac 169  Q
    |||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  1992209 aagaagctaaattagcacacctaaattgacactagagagaatcgaac 1992255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 3715566 - 3715508
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcga 181  Q
    |||||| ||||| | ||||||||||||| |||| ||||||||||||| ||| |||||||    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcga 3715508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8597708 - 8597770
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| ||||||||||| |||||||| |||| ||| |||| |||||    
T  8597708 gaagaagctaaattagcccacccaaattggcactggagagaattgaacttgagaccttgagga 8597770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 11103396 - 11103442
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaa 168  Q
    ||||||||||||||| | ||| ||||||||||| |||||||||||||    
T  11103396 gaagaagttaaattagctcacttaaattggcaccagagagaatcgaa 11103442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 16535299 - 16535245
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaac 176  Q
    |||||| |||||||| || | | |||||||||||| |||||||||||||||||||    
T  16535299 gaagaaattaaattaaccaatcgaaattggcactacagagaatcgaacctgaaac 16535245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 18562599 - 18562661
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||||||||||| ||| | ||||||| ||||||||| ||| ||||    
T  18562599 gaagaagctaaattagcccacctaaattggtacttgggagaatcaaacctgaaatctcaagga 18562661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 6758383 - 6758444
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagg 183  Q
    ||||||| ||||||  ||||||||||||| ||| |||||||||||| | ||| |||||||||    
T  6758383 gaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgagg 6758444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 11448962 - 11448921
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  11448962 cccaccgaaattggcaccagagagaatcgaacctgagacctc 11448921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 30127512 - 30127456
Alignment:
Q  125 gaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcga 181  Q
    |||| ||||||| || ||||||||||||||  || |||||||||||||| |||||||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcga 30127456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 7949415 - 7949477
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||| ||| |||||||||||||||||| |||| |||||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgagga 7949477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 47386752 - 47386809
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||| |||||||| |||||    
T  47386752 gaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctc 47386809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 22096577 - 22096629
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgag 182  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  22096577 taaattagcccacttaaattggcactagggagaatcgaacctgagacctcgag 22096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 12793872 - 12793919
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaac 169  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  12793872 gaagaagctaaattagcccacctaaattggcaccagagagaatcgaac 12793919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 9693459 - 9693521
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||| |||||    
T  9693459 gaagaaggtaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagga 9693521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 13483129 - 13483068
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||| ||||||||||||| || | | ||||||| ||||||||||||||||||    
T  13483129 gaagaagttaaattagcccacctaaattgacaat-gggagaatcaaacctgaaacctcgagga 13483068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 28635811 - 28635749
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| |||||| |||||||||| |||||||||||||||| | ||||| ||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccagga 28635749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 30938180 - 30938242
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || |||||||||||||||| | | ||||||||||||||| ||||||||||    
T  30938180 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgagga 30938242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 37443806 - 37443752
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||    
T  37443806 taaattagcccacataaattggcaccagagataatcgaacatgaaacctcgagga 37443752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 39509177 - 39509123
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||||||||| |||| | ||||||||||||||| ||||||||||    
T  39509177 taaattaacccacctaaattgccactggggagaatcgaacctgagacctcgagga 39509123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 19531971 - 19532016
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaa 175  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||    
T  19531971 taaattagcccacctaaattggcatcagagagaatcgaacctgaaa 19532016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 43719171 - 43719212
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  43719171 cccaccgaaattagcactagagagaatcgaacctgaaacctc 43719212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 49262653 - 49262702
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    ||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  49262653 taaattagcccacctaaattggcactggggagaatcgaacctgagacctc 49262702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 3606984 - 3607039
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    |||||||||||||| ||||||||||||| |||||| | ||||||||| | ||||||    
T  3606984 aagaagttaaattagcccacctaaattgacactagggggaatcgaactttaaacct 3607039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 23378048 - 23378009
Alignment:
Q  145 aaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgagga 23378009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 23491991 - 23492042
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaa 174  Q
    |||||||||||||| |||||||||||||||| |   ||||||||||||||||    
T  23491991 aagaagttaaattagcccacctaaattggcaatgaggagaatcgaacctgaa 23492042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 4185200 - 4185146
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||||||||| |||||| ||||||||| | ||| ||||||||||    
T  4185200 taaattagcccacctaaattgacactagggagaatcgatcttgagacctcgagga 4185146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 29312233 - 29312271
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaa 168  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  29312233 taaattagcccacctaaattggcaccagagagaatcgaa 29312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 37274420 - 37274482
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||| |||||| |||| |||||||||||||||| | |||| |||||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgagga 37274482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 41683856 - 41683810
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaac 176  Q
    ||||||| ||||||||||||||||||||| ||||| |||| ||||||    
T  41683856 taaattaacccacctaaattggcactagaaagaattgaacgtgaaac 41683810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 49938797 - 49938859
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||| ||||||||||||||||||||  |||||| ||||| | |||| |||||    
T  49938797 gaagaagctaaattaacccacctaaattggcactaggaagaatcaaacctaagaccttgagga 49938859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 52254365 - 52254427
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||| || ||| |||| ||||||||| ||||||||| ||||||||||||| ||||    
T  52254365 gaagaagctaaactagcccgcctacattggcactggagagaatctaacctgaaacctcaagga 52254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 34844864 - 34844905
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  34844864 cccaccgaaattggcaccagagagaatcgaacctgagacctc 34844905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 40058958 - 40058999
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  40058958 cccaccgaaattggcaccagagagaatcgaacctgagacctc 40058999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 49287949 - 49287908
Alignment:
Q  138 cccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  49287949 cccaccgaaattggcaccagagagaatcgaacctgagacctc 49287908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 51948594 - 51948533
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||  |||  ||||||| |||| |||||||| |||||||| ||||||||||    
T  51948594 aagaagttaaattagtccatttaaattgacactggagagaattgaacctgagacctcgagga 51948533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 51969131 - 51969070
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||||||  ||| | |||||||||| ||||||||  ||||||||||||| |||||    
T  51969131 aagaagttaaattagtccatccaaattggcaccagagagaaatgaacctgaaaccttgagga 51969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 7292782 - 7292810
Alignment:
Q  145 aaattggcactagagagaatcgaacctga 173  Q
    |||||||||||||||||||||||||||||    
T  7292782 aaattggcactagagagaatcgaacctga 7292810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 9241073 - 9241101
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  9241073 caataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 12798765 - 12798737
Alignment:
Q  156 agagagaatcgaacctgaaacctcgagga 184  Q
    |||||||||||||||||||||||||||||    
T  12798765 agagagaatcgaacctgaaacctcgagga 12798737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 19238625 - 19238653
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  19238625 caataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 40283947 - 40283979
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcac 154  Q
    ||||||||||||||| |||||||||||||||||    
T  40283947 gaagaagttaaattagcccacctaaattggcac 40283979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 51250570 - 51250598
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  51250570 caataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 55427248 - 55427276
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  55427248 caataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 25637266 - 25637206
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgag 182  Q
    ||||||||||||||| ||||||||||||||||   ||||||| ||||||||| ||||||||    
T  25637266 gaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgag 25637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 33582088 - 33582026
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||||||  |||||||||||| || ||||||||||||||||||| ||||| ||||    
T  33582088 gaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaagga 33582026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 37972008 - 37971959
Alignment:
Q  124 agaagttaaattaccccacctaaattggcactagagagaatcgaacctga 173  Q
    ||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  37972008 agaagctaaattagcccacctaaattggcaccggagagaatcgaacctga 37971959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 11251198 - 11251140
Alignment:
Q  126 aagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||| | ||||||||||| ||| |||||||||| ||||||| |||| |||||    
T  11251198 aagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgagga 11251140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 16951492 - 16951434
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcga 181  Q
    |||||||||||||| |||| ||||||| ||| |  |||||||||||||||| |||||||    
T  16951492 aagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgagacctcga 16951434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 17022157 - 17022099
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcga 181  Q
    |||||||||||||| |||| ||||||| ||| |  |||||||||||||||| |||||||    
T  17022157 aagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgagacctcga 17022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 23052492 - 23052546
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| |||||| ||| ||||||||| ||||||||||||||| |||| |||||    
T  23052492 taaattagcccacccaaactggcactagggagaatcgaacctgagaccttgagga 23052546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 34041626 - 34041664
Alignment:
Q  183 gatcctaaatcaataccaccaggccaacccaagtgggtt 221  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  34041626 gatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 39715099 - 39715045
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||| ||||||||||||||  || | ||||||||||||||| ||||||||||    
T  39715099 taaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgagga 39715045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 21195638 - 21195699
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||||| ||||||| |||| | |||||| |||||||| ||||||||||||| |||| |||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgagga 21195699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 33569836 - 33569881
Alignment:
Q  139 ccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    |||| |||||| |||| |||||||||||||||||| ||||||||||    
T  33569836 ccacttaaattagcaccagagagaatcgaacctgagacctcgagga 33569881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 39765040 - 39764991
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacctc 179  Q
    ||||||| |||| |||||||| |||||||| ||||||||||||| |||||    
T  39765040 taaattagcccagctaaattgacactagagggaatcgaacctgagacctc 39764991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 19244216 - 19244168
Alignment:
Q  130 taaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| |||||  |||||||||| |||||||||||||||||| ||||    
T  19244216 taaattagcccactcaaattggcaccagagagaatcgaacctgagacct 19244168  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 21303955 - 21304011
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| ||||||| ||| |  |||||| ||| |||||||||||||||||||||||    
T  21303955 gaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctgaaacct 21304011  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 37480103 - 37480075
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  37480103 caataccaccaggccaacccaagtgggtt 37480075  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 49420 - 49362
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcga 181  Q
    |||||||||||||| ||||| ||||||| |||  ||||||||||||||||| |||||||    
T  49420 aagaagttaaattaacccacttaaattgacaccggagagaatcgaacctgatacctcga 49362  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 45721 - 45782
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacctcgagga 184  Q
    ||||||||||| || ||||||||||||| ||| |||||||||||||| ||| ||||| ||||    
T  45721 aagaagttaaactaacccacctaaattgacaccagagagaatcgaacatgagacctcaagga 45782  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 42625 - 42672
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaac 169  Q
    ||||||||||||||| ||||||||||||| ||| | ||||||||||||    
T  42625 gaagaagttaaattagcccacctaaattgacaccatagagaatcgaac 42672  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 4455 - 4399
Alignment:
Q  122 gaagaagttaaattaccccacctaaattggcactagagagaatcgaacctgaaacct 178  Q
    ||||||| |||||||  ||||| |||||| |||||||| ||||||||||| ||||||    
T  4455 gaagaagctaaattagtccacccaaattgacactagagggaatcgaacctaaaacct 4399  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 32817 - 32845
Alignment:
Q  193 caataccaccaggccaacccaagtgggtt 221  Q
    |||||||||||||||||||||||||||||    
T  32817 caataccaccaggccaacccaagtgggtt 32845  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 112396 - 112348
Alignment:
Q  123 aagaagttaaattaccccacctaaattggcactagagagaatcgaacct 171  Q
    |||||| |||||||  ||||||||||||||||  |||||||||||||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacct 112348  T

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