View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10746_high_4 (Length: 247)
Name: NF10746_high_4
Description: NF10746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10746_high_4 |
 | |
|
| [»] scaffold0140 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0140 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 2948 - 3038
Alignment:
| Q |
9 |
atgaagctggtggaggagatgccagatatgcaattgcaagatcataccaaaaggcttagacaacattgttttaaggccaattacaagaaaa |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2948 |
atgaagctggtggaggagatgccagatatgcaattgcaagatcataccaaaaggcttagacaacattgttttaaggccaattacaagaaaa |
3038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University