View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10746_low_10 (Length: 211)
Name: NF10746_low_10
Description: NF10746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10746_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 38038528 - 38038419
Alignment:
| Q |
63 |
aacaacaagatttcgagtcacataagaaaacataatactactac---cagggaaaggggacacagcaagaaactgattttccctaagcaaaacctaaaca |
159 |
Q |
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| T |
38038528 |
aacaacaagatatcgagtcacataagaaaacatactactactactaccagggaaaggggacacagcaagaaagtgattttccctaagcaaaacctaaaca |
38038429 |
T |
|
| Q |
160 |
aacaaacaag |
169 |
Q |
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|||||||||| |
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| T |
38038428 |
aacaaacaag |
38038419 |
T |
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