View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10747_low_1 (Length: 442)

Name: NF10747_low_1
Description: NF10747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10747_low_1
NF10747_low_1
[»] chr6 (56 HSPs)
chr6 (13-170)||(639397-639556)
chr6 (31-191)||(639210-639372)
chr6 (13-220)||(638663-638872)
chr6 (13-189)||(1578063-1578241)
chr6 (13-192)||(1578226-1578407)
chr6 (13-189)||(7655421-7655601)
chr6 (28-189)||(34961899-34962064)
chr6 (13-189)||(639710-639888)
chr6 (13-140)||(1577949-1578075)
chr6 (28-192)||(2190815-2190981)
chr6 (32-189)||(30405493-30405654)
chr6 (13-185)||(29616496-29616672)
chr6 (321-386)||(638497-638562)
chr6 (13-190)||(12600759-12600938)
chr6 (13-189)||(1577741-1577919)
chr6 (13-192)||(639541-639722)
chr6 (32-192)||(34961370-34961534)
chr6 (28-188)||(30404955-30405119)
chr6 (28-178)||(34961724-34961878)
chr6 (28-168)||(640082-640224)
chr6 (13-156)||(1577608-1577753)
chr6 (36-189)||(639026-639183)
chr6 (28-192)||(24037032-24037198)
chr6 (28-192)||(34961204-34961370)
chr6 (28-192)||(12600923-12601092)
chr6 (30-192)||(34962082-34962248)
chr6 (70-178)||(30405690-30405800)
chr6 (13-135)||(638916-639038)
chr6 (100-192)||(29616118-29616212)
chr6 (89-188)||(30404769-30404870)
chr6 (28-189)||(7655622-7655786)
chr6 (68-158)||(34967725-34967817)
chr6 (16-79)||(34961153-34961216)
chr6 (13-192)||(34964620-34964798)
chr6 (28-192)||(639873-640040)
chr6 (117-192)||(29616657-29616734)
chr6 (28-130)||(34961608-34961710)
chr6 (28-189)||(24036091-24036253)
chr6 (73-178)||(30405133-30405240)
chr6 (106-178)||(2190543-2190617)
chr6 (28-192)||(2190631-2190797)
chr6 (70-178)||(30401570-30401680)
chr6 (13-189)||(7655774-7655954)
chr6 (86-189)||(30405308-30405412)
chr6 (19-82)||(24036034-24036097)
chr6 (19-81)||(2191845-2191907)
chr6 (86-189)||(2192076-2192181)
chr6 (28-154)||(7655975-7656104)
chr6 (86-189)||(24035761-24035866)
chr6 (70-189)||(29616307-29616427)
chr6 (99-189)||(7655341-7655433)
chr6 (140-178)||(24037396-24037434)
chr6 (28-117)||(2191689-2191778)
chr6 (68-129)||(29615978-29616039)
chr6 (30-83)||(29616045-29616098)
chr6 (53-127)||(24035952-24036023)
[»] chr1 (15 HSPs)
chr1 (13-184)||(24665670-24665843)
chr1 (28-170)||(48739610-48739756)
chr1 (13-192)||(24665338-24665519)
chr1 (13-189)||(24665504-24665682)
chr1 (28-192)||(24665850-24666016)
chr1 (28-192)||(48739420-48739588)
chr1 (28-192)||(24666202-24666368)
chr1 (28-140)||(48234384-48234498)
chr1 (70-189)||(41468435-41468556)
chr1 (13-189)||(24666353-24666531)
chr1 (86-189)||(41468255-41468360)
chr1 (92-189)||(41468015-41468114)
chr1 (6-79)||(24665994-24666067)
chr1 (75-140)||(24666083-24666148)
chr1 (116-189)||(48739777-48739852)
[»] chr7 (33 HSPs)
chr7 (33-192)||(35466796-35466957)
chr7 (15-177)||(13930366-13930530)
chr7 (13-189)||(15738134-15738312)
chr7 (13-192)||(15737968-15738149)
chr7 (13-192)||(35466630-35466811)
chr7 (27-192)||(8948290-8948457)
chr7 (28-156)||(8948160-8948290)
chr7 (13-140)||(15738300-15738426)
chr7 (28-155)||(8947295-8947424)
chr7 (13-192)||(8947090-8947273)
chr7 (28-181)||(13910254-13910409)
chr7 (13-170)||(44213590-44213749)
chr7 (13-189)||(15738456-15738634)
chr7 (33-192)||(35466962-35467123)
chr7 (13-156)||(15738622-15738767)
chr7 (75-192)||(8947442-8947560)
chr7 (28-189)||(13914341-13914503)
chr7 (28-192)||(13910070-13910236)
chr7 (33-189)||(35467131-35467289)
chr7 (54-192)||(8947607-8947747)
chr7 (28-192)||(8947793-8947959)
chr7 (13-189)||(35467297-35467475)
chr7 (106-188)||(13909982-13910066)
chr7 (13-81)||(8947740-8947808)
chr7 (16-192)||(13914494-13914672)
chr7 (13-192)||(8947959-8948140)
chr7 (13-83)||(13914657-13914727)
chr7 (53-178)||(13914737-13914861)
chr7 (124-192)||(13930517-13930587)
chr7 (331-385)||(8946329-8946383)
chr7 (70-156)||(13930241-13930329)
chr7 (86-189)||(13914913-13915018)
chr7 (28-61)||(13930318-13930351)
[»] chr8 (30 HSPs)
chr8 (16-166)||(123992-124144)
chr8 (28-192)||(34907375-34907541)
chr8 (30-192)||(23484295-23484461)
chr8 (30-192)||(23484481-23484647)
chr8 (34-192)||(23484667-23484829)
chr8 (13-192)||(23483757-23483938)
chr8 (32-177)||(32058698-32058845)
chr8 (28-177)||(32058860-32059011)
chr8 (28-192)||(124578-124744)
chr8 (28-168)||(32059026-32059168)
chr8 (69-192)||(124435-124560)
chr8 (67-192)||(23484109-23484236)
chr8 (68-192)||(34907541-34907666)
chr8 (13-188)||(23484857-23485034)
chr8 (33-189)||(32059290-32059448)
chr8 (68-192)||(34907196-34907322)
chr8 (28-188)||(124762-124926)
chr8 (13-188)||(23480035-23480212)
chr8 (30-192)||(16534956-16535120)
chr8 (30-189)||(23483926-23484089)
chr8 (28-192)||(16535467-16535632)
chr8 (13-166)||(32059436-32059591)
chr8 (106-178)||(16534682-16534756)
chr8 (91-192)||(124995-125098)
chr8 (30-140)||(32059194-32059304)
chr8 (20-140)||(9873456-9873575)
chr8 (139-178)||(9874262-9874301)
chr8 (19-81)||(16535623-16535685)
chr8 (139-192)||(16534883-16534936)
chr8 (86-189)||(16535854-16535959)
[»] chr2 (17 HSPs)
chr2 (15-140)||(18454154-18454279)
chr2 (68-192)||(15571581-15571707)
chr2 (32-177)||(12522776-12522923)
chr2 (28-178)||(18454351-18454505)
chr2 (19-189)||(18453326-18453498)
chr2 (13-192)||(18453986-18454167)
chr2 (28-140)||(18454519-18454631)
chr2 (13-192)||(18453486-18453667)
chr2 (35-192)||(18453176-18453335)
chr2 (14-130)||(18453653-18453769)
chr2 (31-187)||(14493111-14493269)
chr2 (101-171)||(6988644-6988716)
chr2 (28-124)||(15571725-15571821)
chr2 (13-108)||(14493259-14493354)
chr2 (70-168)||(12522960-12523060)
chr2 (72-156)||(14493350-14493436)
chr2 (28-61)||(12522938-12522971)
[»] chr5 (12 HSPs)
chr5 (13-189)||(11234665-11234843)
chr5 (13-178)||(11234831-11235000)
chr5 (13-192)||(11235167-11235348)
chr5 (13-189)||(11234499-11234677)
chr5 (28-192)||(22256537-22256703)
chr5 (28-189)||(11235014-11235179)
chr5 (28-192)||(22259521-22259686)
chr5 (19-82)||(22259677-22259740)
chr5 (73-192)||(11234393-11234514)
chr5 (139-192)||(22256466-22256519)
chr5 (140-178)||(22256301-22256339)
chr5 (86-189)||(22259908-22260013)
[»] chr4 (40 HSPs)
chr4 (19-189)||(47325055-47325227)
chr4 (19-189)||(47339851-47340023)
chr4 (13-192)||(43265686-43265867)
chr4 (68-192)||(13739940-13740066)
chr4 (28-192)||(13743213-13743381)
chr4 (14-192)||(43265852-43266032)
chr4 (15-140)||(47324274-47324399)
chr4 (15-140)||(47339070-47339195)
chr4 (68-192)||(13742850-13742976)
chr4 (13-189)||(15781294-15781471)
chr4 (28-189)||(47324555-47324720)
chr4 (28-189)||(47339351-47339516)
chr4 (14-140)||(47324108-47324234)
chr4 (13-192)||(47324386-47324567)
chr4 (14-140)||(47338904-47339030)
chr4 (13-192)||(47339182-47339363)
chr4 (43-192)||(43264720-43264871)
chr4 (72-189)||(43265174-43265293)
chr4 (53-192)||(43265337-43265475)
chr4 (28-192)||(13743029-13743195)
chr4 (13-192)||(47324886-47325067)
chr4 (13-192)||(47339682-47339863)
chr4 (14-156)||(47324756-47324900)
chr4 (14-156)||(47339552-47339696)
chr4 (64-189)||(15780759-15780886)
chr4 (53-192)||(15780922-15781060)
chr4 (68-192)||(13743399-13743525)
chr4 (86-192)||(43265017-43265125)
chr4 (28-124)||(13739826-13739922)
chr4 (91-178)||(15780561-15780650)
chr4 (35-125)||(47325283-47325373)
chr4 (35-125)||(47340079-47340169)
chr4 (13-82)||(15781071-15781140)
chr4 (338-382)||(36392991-36393035)
chr4 (16-192)||(15781125-15781303)
chr4 (72-192)||(43265520-43265642)
chr4 (28-188)||(43264538-43264702)
chr4 (326-386)||(36227496-36227557)
chr4 (328-379)||(43263809-43263860)
chr4 (13-83)||(43265465-43265535)
[»] chr3 (21 HSPs)
chr3 (28-189)||(11762942-11763105)
chr3 (28-155)||(51858080-51858209)
chr3 (13-178)||(49791182-49791349)
chr3 (31-187)||(49791818-49791976)
chr3 (13-192)||(11763457-11763638)
chr3 (96-192)||(51858227-51858324)
chr3 (53-156)||(11763141-11763246)
chr3 (13-156)||(11763825-11763970)
chr3 (28-192)||(51857856-51858024)
chr3 (18-192)||(11763623-11763799)
chr3 (72-192)||(49791002-49791124)
chr3 (13-192)||(11762773-11762954)
chr3 (53-192)||(49790819-49790957)
chr3 (13-156)||(11763327-11763472)
chr3 (15-128)||(11762651-11762764)
chr3 (6-83)||(11763236-11763313)
chr3 (72-156)||(49791651-49791737)
chr3 (13-108)||(49791733-49791828)
chr3 (13-83)||(49790947-49791017)
chr3 (324-376)||(51857242-51857295)
chr3 (13-61)||(51857823-51857871)
[»] scaffold0049 (9 HSPs)
scaffold0049 (28-192)||(5034-5200)
scaffold0049 (28-192)||(4848-5016)
scaffold0049 (28-192)||(5218-5386)
scaffold0049 (68-191)||(5742-5867)
scaffold0049 (91-192)||(5404-5507)
scaffold0049 (73-178)||(5604-5711)
scaffold0049 (72-161)||(5939-6030)
scaffold0049 (28-192)||(29091-29256)
scaffold0049 (13-176)||(4696-4863)
[»] scaffold0031 (6 HSPs)
scaffold0031 (30-192)||(82169-82333)
scaffold0031 (64-166)||(83987-84091)
scaffold0031 (28-128)||(84377-84476)
scaffold0031 (19-82)||(84257-84320)
scaffold0031 (139-192)||(82096-82149)
scaffold0031 (140-178)||(81931-81969)
[»] scaffold0268 (4 HSPs)
scaffold0268 (31-192)||(5253-5416)
scaffold0268 (20-192)||(5937-6110)
scaffold0268 (139-192)||(5179-5232)
scaffold0268 (106-178)||(4978-5052)


Alignment Details
Target: chr6 (Bit Score: 121; Significance: 8e-62; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 639556 - 639397
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  639556 taggtcgaagaatcttgtcattagggtgaaagttgtaagcttgattagtcaatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 639457  T
Q  113 aagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaa 170  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  639456 aagattctttcagttagggtaagagttgtaagtttgaacagtcgttttgaaatctttgaa 639397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 639372 - 639210
Alignment:
Q  31 cattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagg 130  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  639372 cattagggtgagagttgtacgcttgattagtcgatagagagtttgattagtcgttgaacattcattcaagtactttgactacaagattctttcagttagg 639273  T
Q  131 ataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatct 191  Q
     |||||||  |||||||||||||||||||||||||||||||| |||  || ||| ||||||||    
T  639272 gtaagagttatgagtttgatcagtcgttttgaaatctttgaattaggctaggtcaaagaatct 639210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 638872 - 638663
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||| |||  ||||||  |||||||||||||||||||||||||| |||| ||| |||||| |||||| |||||||||| ||| ||||||||||||    
T  638872 taggtcgaataatcttgtcatctgggtgagagttgtaagcttgattagtcgataaagattttgatcagtcgttgaacattcatccaactactttgactac 638773  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctttcagtggattccatgtta 210  Q
    | ||||||||||| |||| |||||||  ||||||||||||  |||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  638772 acgattctttcagatagggtaagagttgtgagtttgatcacccgttttaaaattttggaagtagtttatgtcgaagaatctttcagtggattccatgtta 638673  T
Q  211 actgtaatgc 220  Q
    ||||||||||    
T  638672 actgtaatgc 638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 1578241 - 1578063
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||| |||||||| |||||| |||||||||||||| | || ||| ||||||||||| | |||||||||| ||||||||||||||||    
T  1578241 taggtcgaagaatcttgttattagggttagagttttaagcttgattagtcggtaaagaatttgattagtcattgaacattcatccaagtactttgactac 1578142  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||| || |||||||  ||| |||||  ||||||| ||||||| | ||| ||||||| ||||||||||    
T  1578141 aagattctttcagttggggtaagagttgtgactttgaagagtcgttatgaaatcatggaagtagtttaggtcgaagaat 1578063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 1578407 - 1578226
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||   ||||||||||  ||  || |||||||||||||| | || ||||||||||||||| | |||||||||| ||||||||||||||||    
T  1578407 taggtcgaagaatttggtcattaggggcagcattttaagcttgattagtcggtaaagagtttgattagtcattgaacattcatccaagtactttgactac 1578308  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | ||||||||||||| ||||||||||  |||||||||  |||| || | ||||||| ||| ||||||| |||||||||||||    
T  1578307 atgattctttcagttgggataagagttgtgagtttgaagagtcattctaaaatcttggaagtagtttaggtcgaagaatctt 1578226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 7655421 - 7655601
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    |||||||||||||  |||||||||||| ||||||||||||||| ||||| ||||   |||||||||||| || |||||| ||||| ||||||||||||||    
T  7655421 taggtcgaagaatgttgtcattagggttagagttgtaagcttggttagtcgataacaagagtttgattactcatcgaacgttcatccaagtactttgact 7655520  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
     |||||||||||||| ||||  ||||||  |||||||||||||||||  |||||| |||| | | ||||| ||||||||||    
T  7655521 ccaagattctttcagctagggcaagagttgtgagtttgatcagtcgtgatgaaatatttgtattcgtttaggtcgaagaat 7655601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 34962064 - 34961899
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||| |||||||||||||||||| ||| ||||| ||||   ||||||||||||||| | |||| |||||  ||||||||||||| ||||||||||||||    
T  34962064 tgtcagtagggtgagagttgtaagtttggttagtcgataacaagagtttgattagtcattgaacgttcatcaaagtactttgactccaagattctttcag 34961965  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||| |||||||  |||||||||||||||||  ||| ||||||||| ||||||| ||| ||||||    
T  34961964 ttagggtaagagttgtgagtttgatcagtcgtgctgacatctttgaattagtttaagtcaaagaat 34961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 639888 - 639710
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  ||||||||||||||||||||||||||| ||||||  ||| | ||||||||||||| | |||| ||||| |||||||||||||| |    
T  639888 taggtcaaagaatcttgtcattagggtgagagttgtaagcttaattagtcaataaaaagtttgattagtcattgaacgttcatccaagtactttgactcc 639789  T
Q  113 aagattctttcagttagg--ataagagttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||||||  || |||  |||||||||||||| |||  || ||||| |||  ||| || ||||||||||    
T  639788 aagattctttcagttagggaatgagatgtgagtttgatcagtggttccgacatcttagaagcagtctaggtcgaagaat 639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 1578075 - 1577949
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||| |||| ||| ||||||||||| | |||||||||||  |||||||| |||||    
T  1578075 taggtcgaagaatattgtcattagggttagagtt-taagcttgattagtcgataaagaatttgattagtcattgaacattcatttgagtactttcactac 1577977  T
Q  113 aagattctttcagttaggataagagttg 140  Q
    |||||||||||||| |||  ||||||||    
T  1577976 aagattctttcagtgagggaaagagttg 1577949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 2190815 - 2190981
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| | |||||||| |||||| | |||| ||  ||||||||||||| |  | |||||  | ||||||||||| ||| ||||||| ||||    
T  2190815 tgtcattagggtgatacttgtaagcctgattaatcgataaagtctttgattagtcgttggccgttcatgaacgtactttgactccaatattctttaagtt 2190914  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||||  |||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  2190915 agggtaagagttgcgagtttgatcagtcgttttgaaatcttagaagtagtttaggtcgaagaatctt 2190981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 30405654 - 30405493
Alignment:
Q  32 attagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    |||||||| ||| ||||||||||| ||||| ||||   | ||||||||||||| | |||| ||||| |||||||||||||| ||||||||||||||||||    
T  30405654 attagggttagatttgtaagcttggttagtcgataacaatagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcagttag 30405555  T
Q  130 gataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    | |||||||  |||||||||| ||||||| ||| ||||| ||| ||||||| ||||||||||    
T  30405554 ggtaagagttgtgagtttgattagtcgttgtgacatcttcgaattagtttaggtcgaagaat 30405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 29616672 - 29616496
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    ||||||||| |||  |||||||||||| ||| ||||||| ||| ||| | ||||   ||||||||||| ||| | |||| ||||| |||||||| |||||    
T  29616672 taggtcgaaaaatcttgtcattagggttagatttgtaagtttggttattcgataacaagagtttgattggtcattgaacgttcatccaagtactctgact 29616573  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaa 185  Q
     ||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  29616572 ccaagattcttttagttagggtaagagttgtgagtttgatcagtcgttttgaaatcttggaagtagtttaggtcgaa 29616496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 638562 - 638497
Alignment:
Q  321 ttcacattttccccctataattttcacattttcgtttccctcttcccaaaaattatcaacgcgctc 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  638562 ttcacattttccccctataattttcacattttcgtttccctcttcccaaaaattatcaacgcgctc 638497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 12600938 - 12600759
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  |||||||||  ||||||||||||  |||| |||| | |  | | ||||||||||| | |||||||||||||||||||||||||||    
T  12600938 taggtcaaagaatcttgtcattagcttgagagttgtaaatttgaatagtcggtgaaaaatttgattagtcattgaacattcattcaagtactttgactac 12600839  T
Q  113 aagattctttcagttaggataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatc 190  Q
    |||||||||||||||| | ||||||   ||||||||||||||| || ||| ||||| ||| ||||||| ||| |||||||    
T  12600838 aagattctttcagttatggtaagagctgtgagtttgatcagtcattatgacatcttggaagtagtttaggtcaaagaatc 12600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 1577919 - 1577741
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||||||| ||| || |||||||||||||| | || ||||||||||||||| | |||||||||||  || ||||| ||| |    
T  1577919 taggtcgaagaatgttgtcattagggttagatttttaagcttgattagtcggtaaagagtttgattagtcattgaacattcatttgagcactttcactgc 1577820  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||||   |||||||  ||||||| |  ||||||| ||| ||||||||| ||||||| || |||||||    
T  1577819 aagattctttcagttaaagtaagagttgtgagtttcaagagtcgttctgacatctttgaagtagtttaggttgaagaat 1577741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 639722 - 639541
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||  | | | | ||||||| | ||||||| ||  ||||||||| ||| |    
T  639722 taggtcgaagaatactgtcattagggtgagagttgtaagattgattagtcgattaaaattgttattagtcattgaacattaatcaaagtactttaactgc 639623  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||||||||||| |||| ||  ||||||| |||  ||||| ||| |||||  || ||||||| |||||||||||||    
T  639622 aggattctttcagttagggtaagcgttgtgagtttaatcgatcgttctgacatcttgtaagtagtttaggtcgaagaatctt 639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 34961534 - 34961370
Alignment:
Q  32 attagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    ||||||||||||| |||||||||| ||||| ||||   ||||||||||||||| | |||| ||||| |||||||||||| | ||||||||||| ||||||    
T  34961534 attagggtgagaggtgtaagcttggttagtcgataacaagagtttgattagtcattgaacgttcatccaagtactttgattccaagattcttttagttag 34961435  T
Q  130 gataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||  |||||||||||||||||| | || |||||| | |||||||  || |||||||||    
T  34961434 ggtaagagttgtgagtttgatcagtcgttctaaagtctttgtagtagtttagttcaaagaatctt 34961370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 30405119 - 30404955
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgat-agagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagt 126  Q
    |||||||||||||||||||  ||||||||||||| ||| | ||||||||||||||| |||| |||| || ||| |||||||||| || ||||||||||||    
T  30405119 tgtcattagggtgagagttacaagcttgattagtcgattaaagagtttgattagtcatcgatcattgatccaactactttgactccatgattctttcagt 30405020  T
Q  127 taggataagagt--tgagtttgatcagtcgtt-ttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    |||| |||||||  ||||| |||| ||||||| |||| ||||||||  ||||||| ||| |||||    
T  30405019 tagggtaagagttgtgagtctgataagtcgttattgacatctttgatttagtttaggtctaagaa 30404955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 34961878 - 34961724
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||||||||||||||||| || ||||| ||||   ||||||||||||||| |  ||||||| | |||||||||||||| ||||||||||| ||    
T  34961878 tgtcattagggtgagagttgtaagcgtggttagtcgataacaagagtttgattagtcatttaacattcctccaagtactttgactccaagattcttttag 34961779  T
Q  126 ttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| ||| |||||  ||||||||||| |||| ||| || |||||| |||||||    
T  34961778 ttagggtaatagttgtaagtttgatcagccgttatgacatatttgaagtagttta 34961724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 640224 - 640082
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||| ||||||| ||||||  | ||||||||||| | || ||||||||||||||| | |||||||| | |||||||||||||| |||||||||| || ||    
T  640224 tgtcgttagggttagagttacaggcttgattagtcgttaaagagtttgattagtcattgaacattcgtccaagtactttgacttcaagattcttccaatt 640125  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttg 168  Q
    | | |||||||  |||||||||| |||||||||||||||||||    
T  640124 aaggtaagagttgtgagtttgatgagtcgttttgaaatctttg 640082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 1577753 - 1577608
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||| |||||||| |||||||| ||  |||||| |||||||||||||| | || ||||||||||||||| | |||||||  ||  |||||||| ||||     
T  1577753 taggttgaagaatattgtcattatggctagagttttaagcttgattagtcggtaaagagtttgattagtcattgaacatttgtttgagtactttcactat 1577654  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||    
T  1577653 aagattctttcagttagggtaagagttgtgagtctgatcagtcgtt 1577608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 639183 - 639026
Alignment:
Q  36 gggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggata 133  Q
    |||||| ||||||||||||| ||||| ||||   ||||||||||||||||| |||| ||||| |||||||| ||||| || | |||||||||||||| ||    
T  639183 gggtgatagttgtaagcttggttagtcgataacaagagtttgattagtcgttgaacgttcatccaagtactctgactccatgtttctttcagttagggta 639084  T
Q  134 agagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||||  || ||||||||| ||| ||| ||||| ||| |||| || ||||||||||    
T  639083 agagttgtaagattgatcagtggttctgacatcttagaagtagtctaggtcgaagaat 639026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 24037198 - 24037032
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| | |||||||| |||||| | |||| ||  ||||||||||||| |  | |||||  | ||||||||||| ||| ||||||| ||||    
T  24037198 tgtcattagggtgatacttgtaagcctgattaatcgataaagtctttgattagtcgttggtcgttcatgaacgtactttgactccaatattctttaagtt 24037099  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
     || |||||||||  ||||| |||||||||||||||||||| ||| |||| || |||||||||||||    
T  24037098 ggggtaagagttgcgagtttaatcagtcgttttgaaatcttagaagtagtctaggtcgaagaatctt 24037032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 34961370 - 34961204
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| ||| ||||||||||| ||||| |||| | ||||||||||||| | |||  ||||| |||||||||||||| |||||| |||||| |     
T  34961370 tgtcattagggttagaattgtaagcttggttagtcgataaatagtttgattagtcatagaatgttcatccaagtactttgactccaagatactttcatta 34961271  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | | |||||||  ||||||| | ||||| || ||| ||||| ||| ||||||| |||||||||||||    
T  34961270 atggtaagagttgtgagtttcaccagtcattatgacatcttggaagtagtttaagtcgaagaatctt 34961204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 12601092 - 12600923
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac---aagattctttca 124  Q
    |||||||||||||||||||||| ||||||||||| | |  | | |||||||| || | |||||||||| |||||||||| | |||   || |||||||||    
T  12601092 tgtcattagggtgagagttgtatgcttgattagtcggtgaacaatttgattattcattgaacattcatccaagtactttcaatacaataatattctttca 12600993  T
Q  125 gttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||  |||||||  |||||||||||||||||| | | ||||| ||| ||||||| ||| |||||||||    
T  12600992 gttagagtaagagttgtgagtttgatcagtcgttataacatcttggaagtagtttaggtcaaagaatctt 12600923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 34962248 - 34962082
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| ||| ||||||||||| ||| ||||||   ||||||||||||||  |  ||| ||||| |||||||||||||| | | |||||||| |||    
T  34962248 tcattagggttagatttgtaagcttggttatttgataacaagagtttgattagtaattaaacgttcatccaagtactttgactcccaaattctttcggtt 34962149  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||||  ||||||||| |||||| | ||||||| ||| ||||||| ||| |||||||||    
T  34962148 agggtaagagttgtaagtttgatcggtcgttctaaaatcttagaagtagtttaagtcaaagaatctt 34962082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 30405800 - 30405690
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatcttt 167  Q
    ||||||||||||| | |||| ||||| ||||||||||| || ||||||||||||||||||| |||||||||  |||||||| ||||||| ||| |||||     
T  30405800 agtttgattagtcattgaacgttcatccaagtactttgcctccaagattctttcagttagggtaagagttgtcagtttgattagtcgttgtgacatcttc 30405701  T
Q  168 gaaatagttta 178  Q
    ||| |||||||    
T  30405700 gaattagttta 30405690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 639038 - 638916
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||  | | | | | ||||||  |||||| |||  ||||||||||||| |    
T  639038 taggtcgaagaatactgtcattagggtgagagttgtaagattgattagtcgattaaaattgttactagtcgctgaacatccatcaaagtactttgactgc 638939  T
Q  113 aagattctttcagttaggataag 135  Q
    |||||| ||| ||||||| ||||    
T  638938 aagattattttagttagggtaag 638916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 29616212 - 29616118
Alignment:
Q  100 gtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||||| ||||||||||| ||||||| |||||||||  |||||||| |||||||||||||| |||||| ||||||| ||| |||| ||||    
T  29616212 gtactttgactccaagattcttttagttagggtaagagttgtgagtttgataagtcgttttgaaatatttgaattagtttaggtcaaagattctt 29616118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 30404870 - 30404769
Alignment:
Q  89 cattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaag 186  Q
    ||||||| |||||||| || || ||||||||||||||||||| |||||||  |||||||||| ||| |||||||||| |||||| ||||||| ||| |||    
T  30404870 cattcatccaagtactctgcctccaagattctttcagttagggtaagagttgtgagtttgataagttgttttgaaatatttgaattagtttaggtctaag 30404771  T
Q  187 aa 188  Q
    ||    
T  30404770 aa 30404769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 7655622 - 7655786
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgataga-gagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagt 126  Q
    |||||| |||||  |||||||||||||| ||||| |||| | ||||||||||| ||   |||| ||||| |||||||||| ||| ||||||||||||||     
T  7655622 tgtcatcagggttggagttgtaagcttgtttagtcgataaaagagtttgattactcagtgaacgttcatccaagtactttcactccaagattctttcagc 7655721  T
Q  127 taggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||  ||||||  ||||||||||||||||   |||||| |||| | ||||||| ||||| ||||    
T  7655722 tagggcaagagttgtgagtttgatcagtcgagatgaaatatttgtattagtttaggtcgatgaat 7655786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 34967817 - 34967725
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgtttt 158  Q
    |||||||||||| || | |||| |||||  ||||||||||||| ||||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  34967817 agagtttgattattcattgaacgttcatgtaagtactttgactccaagattctttcagttaggttaatagttgtaagtttgatcagtcgtttt 34967725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 34961216 - 34961153
Alignment:
Q  16 gtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgatta 79  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34961216 gtcgaagaatcttgtaattagggtgagagttgtaagcttgattagtcgataaagagtttgatta 34961153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 34964798 - 34964620
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  ||||| |||||| ||||| | ||||||| |||||  ||| | |||||||||||||   |||| ||||| |||||||||| |||      
T  34964798 taggtcaaagaatcttgtcagtagggttagagtagcaagcttggttagtcaataaatagtttgattagtcagtgaacgttcatccaagtactttaactct 34964699  T
Q  113 aagattctttcagttaggataagagttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    || ||| ||| ||||||| |||||| || ||||||||||| || ||||| |||||| | ||||||| ||| |||||||||    
T  34964698 aaaattattttagttaggttaagag-tgtgtttgatcagttgtgttgaagtctttgtagtagtttaggtcaaagaatctt 34964620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 640040 - 639873
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgata--gagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||| ||||||| |||| |||||||||| ||||| ||||  |||||||||||||||    || | ||||| |||||||| || ||  | |||||||||||    
T  640040 tgtcgttagggtcagaggtgtaagcttggttagtcgataacgagagtttgattagtaagtgatcgttcatccaagtactctgtctctaggattctttcag 639941  T
Q  126 ttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    || || ||||||||  |||||||||||||||||| |||||||||||| ||  ||| ||| |||||||||    
T  639940 ttggg-taagagttttgagtttgatcagtcgtttcgaaatctttgaagtaagttaggtcaaagaatctt 639873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 29616734 - 29616657
Alignment:
Q  117 ttctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||| |||||||||  ||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  29616734 ttctttcagttagggtaagagttgtgagtttcatcagtcgttttgaaatcttggaagtagtttaggtcgaaaaatctt 29616657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 34961710 - 34961608
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| |||||| |||| |||||||||  ||| | |||| |||||||| | ||||||| || |||||||||| ||| ||||||||||| ||||    
T  34961710 tgtcattagggtaagagttctaagattgattagtcaataaatagttggattagtcattgaacatttatccaagtactttcactccaagattcttttagtt 34961611  T
Q  128 agg 130  Q
    |||    
T  34961610 agg 34961608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 24036253 - 24036091
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||    
T  24036253 tgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgtctacaaga-tctttcagtt 24036155  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |   |||||||  ||| |||||| ||| ||| ||| ||||| ||| | |||||||| |||||||    
T  24036154 atagtaagagttgtgaatttgattagttgttatgacatcttggaagttgtttatgttgaagaat 24036091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 30405240 - 30405133
Alignment:
Q  73 ttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaa 170  Q
    ||||||||||   |||| ||||| || ||||||||||| ||||||||||| ||||||| |||||||  |||||||||| ||||||| |||| |||||| |    
T  30405240 ttgattagtcaatgaacgttcatccatgtactttgactccaagattcttttagttagggtaagagttgtgagtttgattagtcgttctgaagtctttgta 30405141  T
Q  171 atagttta 178  Q
     |||||||    
T  30405140 gtagttta 30405133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 2190543 - 2190617
Alignment:
Q  106 tgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| ||| ||||||| ||||||| |||||||||  |||||||||||||||||| ||||||||||| |||||||    
T  2190543 tgactccaatattctttaagttagggtaagagttgtgagtttgatcagtcgttttaaaatctttgaattagttta 2190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 2190631 - 2190797
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| | ||||| | ||||| ||||| |||| ||| |||||||||||   || | ||||| ||| || | |||||  |||||||||  ||||    
T  2190631 tgtcattagggttatagttgaaggcttggttagtcgataaagactttgattagtcagtgatcgttcatccaattagtctgactcgaagattcttgaagtt 2190730  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |   |||||||  |||||||||||||||||||||||||||||| ||||||| ||  |||||||||    
T  2190731 aaggctagagttgtgagtttgatcagtcgttttgaaatctttgaagtagtttaggtgaaagaatctt 2190797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 30401680 - 30401570
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatcttt 167  Q
    ||||||||||||  | |||||||||| ||| |||||||||| ||| |||||||||||| || |||||||  ||| |||||| ||||||| ||| |||||     
T  30401680 agtttgattagtgattgaacattcatccaaatactttgactccaacattctttcagttggggtaagagttgtgattttgattagtcgttgtgacatcttc 30401581  T
Q  168 gaaatagttta 178  Q
    ||| |||||||    
T  30401580 gaattagttta 30401570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 7655774 - 7655954
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgata--gagagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    |||||||| ||||  || ||||||||| ||||||||||||||| ||||| ||||   |||||||||||| ||   |||| ||||| ||||||||||||||    
T  7655774 taggtcgatgaatgttgccattagggttagagttgtaagcttggttagtcgataacaagagtttgattactcagtgaacgttcatccaagtactttgact 7655873  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
     |||||||| || || ||||   |||||  |||||||||  ||||||  |||||| |||| | || |||| ||||||||||    
T  7655874 ccaagattcctttagctagggccagagttgtgagtttgacaagtcgtgatgaaatatttgtattattttaggtcgaagaat 7655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 30405412 - 30405308
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||||||||||| ||||||||||||||||||| |||||||  ||||||||||||| |||  ||||| ||||| |  |||||| ||||    
T  30405412 gaaccttcatccaggtactttgactccaagattctttcagttaggctaagagttgtgagtttgatcagccgtgatgaaa-ctttgtataagtttaggtcg 30405314  T
Q  184 aagaat 189  Q
    ||||||    
T  30405313 aagaat 30405308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 24036097 - 24036034
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtc 82  Q
    |||||||| ||| |||||| |||||| |||||||||||||||| | || |||||||||||||||    
T  24036097 gaagaatattgttattaggttgagagctgtaagcttgattagtcggtaaagagtttgattagtc 24036034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 2191845 - 2191907
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagt 81  Q
    |||||||  ||| |||||| ||||||||||||||||||||||| | || ||||||||||||||    
T  2191845 gaagaatcttgttattaggttgagagttgtaagcttgattagtcggtaaagagtttgattagt 2191907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 2192076 - 2192181
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||||||||| | ||||||||||||||| ||| ||||||| || |    
T  2192076 gaacgttcatgcaggtagtttgactccaatattctttcagttagggcaagaattttgagtttgattattcgttttgaaatcttcgaagtagtttaggtgg 2192175  T
Q  184 aagaat 189  Q
    ||||||    
T  2192176 aagaat 2192181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 7655975 - 7656104
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgataga-gagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagt 126  Q
    ||||||||||||   | ||||||||||| |||||  ||| | ||||||||||| ||   |||| ||||| |||||||||||||| |||| |||||||||     
T  7655975 tgtcattagggttgtatttgtaagcttgtttagtcaataaaagagtttgattactcagtgaacgttcatccaagtactttgactccaaggttctttcagc 7656074  T
Q  127 taggataagagt--tgagtttgatcagtcg 154  Q
    ||||  ||||||  ||||||||||||||||    
T  7656075 tagggcaagagttgtgagtttgatcagtcg 7656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 24035866 - 24035761
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||||||||| | ||||||||||||||| ||| ||||||| || |    
T  24035866 gaacgttcatgcaggtagtttgactccaatattctttcagttaggtcaagaattttgagtttgattattcgttttgaaatcttcgaagtagtttaggtgg 24035767  T
Q  184 aagaat 189  Q
    ||||||    
T  24035766 aagaat 24035761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 29616427 - 29616307
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatcttt 167  Q
    ||||||||||||| | || | ||| |||||||||||| ||| ||| |||||| ||| | |  |||||||  ||||||||| ||||||||||||||||||     
T  29616427 agtttgattagtcattgagcgttcgttcaagtactttaactccaatattcttccagct-gagtaagagttgtgagtttgaccagtcgttttgaaatcttg 29616329  T
Q  168 gaaatagtttatgtcgaagaat 189  Q
     || ||||||| ||||||||||    
T  29616328 taagtagtttaggtcgaagaat 29616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 7655341 - 7655433
Alignment:
Q  99 agtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||||||||| ||||||||||| || |||   ||||||||  |||||||||||||||  |||||| |||| | ||||||| ||||||||||    
T  7655341 agtactttgactccaagattctttaagctagagcaagagttgtgagtttgatcagtcgtgatgaaatatttgtattagtttaggtcgaagaat 7655433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 24037434 - 24037396
Alignment:
Q  140 gagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  24037434 gagtgtgatcagtcgttttgaaatctttgaattagttta 24037396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 2191689 - 2191778
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagat 117  Q
    |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||  ||||||||||| |||||||||    
T  2191689 tgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcacccaagtactttgtctacaagat 2191778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 29616039 - 29615978
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    ||||||||||||||| || | |||| || ||| |||||||| | ||||||||||||||||||    
T  29616039 agagtttgattagtcatcaatcattgatccaactactttgagtccaagattctttcagttag 29615978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 29616098 - 29616045
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcg 83  Q
    |||||||||| ||| ||||||||||| ||||| |||||| |||| |||||||||    
T  29616098 tcattagggttagatttgtaagcttggttagtcgatagatagttggattagtcg 29616045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 24036023 - 24035952
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| ||||||||||||||| | |||| |||   ||||||||||  || ||||||| ||||||||    
T  24036023 ttgattagttgataaagagtttgattagtcattgaacgttc---caagtactttcgctgcaagattatttcagtt 24035952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 6e-44; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 24665670 - 24665843
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||||||| |||||| |||| ||||||||| |||| ||||||||||||||| |   ||||| || ||||||||||||||||    
T  24665670 taggtcgaagaattttgtcattagggttagagttttaagtttgattagtcgataaagagtttgattagtcattatacatttatccaagtactttgactac 24665769  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcga 184  Q
    |||||||||||||||||| |||||||  |||||||||| ||||||| ||||||||||||| ||||||| |||||    
T  24665770 aagattctttcagttaggctaagagttgtgagtttgatgagtcgttctgaaatctttgaagtagtttaggtcga 24665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 48739756 - 48739610
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||| ||||||||||||||| ||||| ||||   |||||||||||||||   |||| ||||| |||||||||||||| ||||| ||||||||    
T  48739756 tgtcattagggttagagttgtaagcttggttagtcgataacaagagtttgattagtcagtgaacgttcatccaagtactttgactccaagactctttcag 48739657  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaa 170  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||    
T  48739656 ttagggtaagagttgtgagtttgatcagtcgttttgaaatctttgaa 48739610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 24665338 - 24665519
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||||||| |||||| |||||||||||||| |||| ||| ||||||||||||| |||||||||| |||||||||| ||| |    
T  24665338 taggtcgaagaatcttgtcattagggttagagttttaagcttgattagtcgataaagaatttgattagtcgttgaacattcatccaagtactttcactgc 24665437  T
Q  113 aagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||| |||  || |||||||||  ||||||   | | ||| ||||||||| ||| ||||||| |||||||||||||    
T  24665438 aagattcttttagtcggggtaagagttgtgagtttgtggatttgttctgaaatcttggaagtagtttaggtcgaagaatctt 24665519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 24665504 - 24665682
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||| ||||| |||||| |||||||||||||| |||| ||| ||||||||||||| |||||||||| |||||| ||| ||| |    
T  24665504 taggtcgaagaatcttgtcatcagggttagagttttaagcttgattagtcgataaagaatttgattagtcgttgaacattcatccaagtattttcactgc 24665603  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||||||| |||| || |||||||  |||||||| | | | ||| ||||||||| ||| ||||||| ||||||||||    
T  24665604 aagattcttttagtttgggtaagagttgtgagtttgttgatttgttctgaaatcttagaagtagtttaggtcgaagaat 24665682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 24665850 - 24666016
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    ||||||||||||||||||||||| |||||||||| |||| | ||||| ||||||| | |||| ||||  |||||||||| ||||| ||||||||||| ||    
T  24665850 tgtcattagggtgagagttgtaatcttgattagtcgataaatagtttcattagtcattgaacgttcacccaagtactttcactactagattctttcaatt 24665949  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | | |||||||  |||||||||||||||||| ||||||||| ||| ||| ||| || ||||||||||    
T  24665950 acggtaagagttatgagtttgatcagtcgttctgaaatcttagaagtagcttaggttgaagaatctt 24666016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 48739588 - 48739420
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||| ||||||| ||| ||||||||||| ||||| | ||   ||||||||||||||| | |||  ||||| ||||||||||||||  |||||||||||||    
T  48739588 tgtcgttagggttagatttgtaagcttggttagtcgctaacaagagtttgattagtcattgaatgttcatccaagtactttgactcgaagattctttcag 48739489  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||| ||| ||| ||| || ||||||    
T  48739488 ttagggtaagagttgtgagtttgatcagtcgttttgaaatctttgaattaggttaggtcaaaaaatctt 48739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 24666202 - 24666368
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| ||||||  ||| |||||||||  ||  | | || |||||||| | |||| ||||| |||||||||||||| ||||||||| ||||||    
T  24666202 tgtcattagggttagagtttcaaggttgattagtcaattaaaaattggattagtcattgaacgttcatccaagtactttgactgcaagattctatcagtt 24666301  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | | |||||||  |||||||||| ||||||| ||||||||| ||| ||||||| |||||||||||||    
T  24666302 aaggtaagagttgtgagtttgatgagtcgttctgaaatcttggaagtagtttaggtcgaagaatctt 24666368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 48234498 - 48234384
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagaga--gtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||||||| ||||||||||| || || |||| | |  |||||||||||| | |||| ||||| |||||||||||||| ||||||||||||||    
T  48234498 tgtcattagggtgagacttgtaagcttggttggtggataaaaaaagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcag 48234399  T
Q  126 ttaggataagagttg 140  Q
    ||||  |||||||||    
T  48234398 ttagagtaagagttg 48234384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 41468556 - 41468435
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatcttt 167  Q
    |||||||||||||   |||||||||| ||| |||||| ||| ||||||||||| |||||||  ||||||||  |||||||||||||||  ||||||||||    
T  41468556 agtttgattagtcaatgaacattcatccaattactttaactccaagattcttttagttagggcaagagttgtgagtttgatcagtcgtgatgaaatcttt 41468457  T
Q  168 gaaatagtttatgtcgaagaat 189  Q
    | | ||||||| ||||||||||    
T  41468456 gtattagtttaggtcgaagaat 41468435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 24666353 - 24666531
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||| ||| ||||| |||||||||||||||||||| |||  | | || |||||| | | |||  ||||| ||||||||||||||      
T  24666353 taggtcgaagaatcttgtaatttgggtgggagttgtaagcttgattagtcgattaaaaattggattagacattgaatgttcatccaagtactttgactct 24666452  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||| ||| ||||| | | |||||  |||||||||| ||||||| ||||||||| ||| ||||||| || |||||||    
T  24666453 aagatttttttagttaaggttagagttgtgagtttgatgagtcgttctgaaatcttggaagtagtttaggttgaagaat 24666531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 41468360 - 41468255
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| |||||||||||||| ||||||||||| |||||||  ||||||  ||||| | |||||||||  ||||||||||| | ||||||| ||||    
T  41468360 gaacgttcatccaagtactttgactccaagattcttttagttagggcaagagttgtgagtatcatcagtcgtgatgaaatctttgtattagtttaggtcg 41468261  T
Q  184 aagaat 189  Q
    ||||||    
T  41468260 aagaat 41468255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 41468114 - 41468015
Alignment:
Q  92 tcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||| |||||||||||||| ||||||||||| |||||||  ||||||  ||||||| |||||||||  ||||||||||| | |||||||  |||||||||    
T  41468114 tcatccaagtactttgactccaagattcttttagttagggcaagagttgtgagtttcatcagtcgtgatgaaatctttgtattagtttagatcgaagaat 41468015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 24665994 - 24666067
Alignment:
Q  6 agtagcataggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgatta 79  Q
    |||||| ||||| |||||||  |||||||||||| | |||| |||||||||||||| |||| ||| ||||||||    
T  24665994 agtagcttaggttgaagaatcttgtcattagggttaaagttttaagcttgattagtcgataaagaatttgatta 24666067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 24666083 - 24666148
Alignment:
Q  75 gattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg 140  Q
    |||||||| | |||| ||||| ||||||||||||||  ||||||||||||||| || |||||||||    
T  24666083 gattagtcattgaacgttcatccaagtactttgactctaagattctttcagttggggtaagagttg 24666148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 48739852 - 48739777
Alignment:
Q  116 attctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||| | ||||| ||  ||||||||||||||||  ||| ||||||||| ||||||| ||||||||||    
T  48739852 attctttcagttatggtaagaattatgagtttgatcagtcgtgctgacatctttgaattagtttaggtcgaagaat 48739777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 35466957 - 35466796
Alignment:
Q  33 ttagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggat 132  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||| | |||||||||| |||||||||||||| || |||||||||||||||| |    
T  35466957 ttagggtgagagttgtaagcttgattagtcgataaaaagtttgattagtcattgaacattcatccaagtactttgactgcaggattctttcagttagggt 35466858  T
Q  133 aagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||  ||||| |||| ||||||| ||| ||||| ||| ||||||| |||||||||||||    
T  35466857 aagagttctgagtctgatgagtcgttctgacatcttggaagtagtttaggtcgaagaatctt 35466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 13930530 - 13930366
Alignment:
Q  15 ggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaa 114  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| | |||||||| |  || |||||||||| |||    
T  13930530 ggtcaaagaatcttgtcatttgggtgagagttgtaagcttgattagttgataaatagtttgattagtcattgaacattcgtctaaatactttgactccaa 13930431  T
Q  115 gattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttt 177  Q
    |||||||||||||||| |||||||  |||||||||| ||||||| ||||||||| ||| ||||||    
T  13930430 gattctttcagttagggtaagagttctgagtttgattagtcgttatgaaatcttggaattagttt 13930366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 15738134 - 15738312
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||| |||||||| |||||| |||||||||||||| | || ||| ||||||||||| | |||||||||| ||||||||||||||||    
T  15738134 taggtcgaagaatcttgttattagggttagagttttaagcttgattagtcggtaaagaatttgattagtcattgaacattcatccaagtactttgactac 15738233  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||| || |||||||  ||| |||||  ||||||| ||||||| | ||| ||||||| ||||||||||    
T  15738234 aagattctttcagttggggtaagagttgtgactttgaagagtcgttatgaaatcatggaagtagtttaggtcgaagaat 15738312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 15737968 - 15738149
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||   ||||||||||  ||  || |||||||||||||| | || ||||||||||||||| | |||||||||| ||||||||||||||||    
T  15737968 taggtcgaagaatttggtcattaggggcagcattttaagcttgattagtcggtaaagagtttgattagtcattgaacattcatccaagtactttgactac 15738067  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | ||||||||||||| ||||||||||  |||||||||  |||| || | ||||||| ||| ||||||| |||||||||||||    
T  15738068 atgattctttcagttgggataagagttgtgagtttgaagagtcattctaaaatcttggaagtagtttaggtcgaagaatctt 15738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 35466811 - 35466630
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||||| |||| | ||||||||||||| | |||| ||||| ||| |||||| |||||    
T  35466811 taggtcgaagaatcttgtcattagggcgagagttgcaagcttgattagtcgataaatagtttgattagtcattgaacgttcatccaaatactttcactac 35466712  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| ||  |||||||||| |||||||  ||||| |||| ||| ||| ||| ||||||||| ||||||| |||||||||||||    
T  35466711 aaggtttgttcagttagggtaagagttgtgagtctgatgagtagttatgacatctttgaagtagtttaggtcgaagaatctt 35466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 8948457 - 8948290
Alignment:
Q  27 ctgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagt 126  Q
    ||||||||||||||||||||||| ||||||||||| | |  | ||||||||| ||| | |||||||||| |||||||||| | ||||| |||||||||||    
T  8948457 ctgtcattagggtgagagttgtatgcttgattagtcggtgaacagtttgattggtcattgaacattcatccaagtactttcaatacaatattctttcagt 8948358  T
Q  127 taggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||| |||||||  |||||||||||||||||  ||| ||||| ||  ||||||||||| || ||||||    
T  8948357 tagggtaagagttgtgagtttgatcagtcgtcatgacatcttagatgtagtttatgtcaaaaaatctt 8948290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 8948290 - 8948160
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| ||||||||||||| ||||||||| | |  | | ||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||    
T  8948290 tgtcattaggttgagagttgtaagtttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgactacaagattctttcaatt 8948191  T
Q  128 aggataagagt--tgagtttgatcagtcgtt 156  Q
    ||| |||||||  ||||||||||||||||||    
T  8948190 agggtaagagttgtgagtttgatcagtcgtt 8948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 15738300 - 15738426
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||| |||| ||| ||||||||||| | |||||||||||  |||||||| |||||    
T  15738300 taggtcgaagaatattgtcattagggttagagtt-taagcttgattagtcgataaagaatttgattagtcattgaacattcatttgagtactttcactac 15738398  T
Q  113 aagattctttcagttaggataagagttg 140  Q
    |||||||||||||| |||  ||||||||    
T  15738399 aagattctttcagtgagggaaagagttg 15738426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 8947424 - 8947295
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||| |||||||||| ||||||||||||||||||| | ||||| ||||||||| |||| ||||| |||||||||| ||| |||||||| ||||| |    
T  8947424 tgtcattaaggtgagagttttaagcttgattagttgataaatagttttattagtcgttgaacgttcatccaagtactttcactccaagattcgttcagat 8947325  T
Q  128 aggataagagt--tgagtttgatcagtcgt 155  Q
    ||| |||||||  |||||||||||||||||    
T  8947324 agggtaagagttgtgagtttgatcagtcgt 8947295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 8947273 - 8947090
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    |||||| || |||| |||||||||||| ||||||  | ||||||||||||||||   |||||||||||| || |  ||| ||||| |||||||||| |||    
T  8947273 taggtcaaaaaatattgtcattagggttagagttacaggcttgattagttgataacaagagtttgattaatcatttaacgttcatccaagtacttttact 8947174  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
     |||||||||||||||||||||||||||  |||||||||  ||||||| |||||| || ||| ||||||| | |||||||||||    
T  8947173 ccaagattctttcagttaggataagagtcgtgagtttgaagagtcgttctgaaattttggaagtagtttaggacgaagaatctt 8947090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 13910254 - 13910409
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| | |||||||| |||||| | |||| ||| ||||||||||||| |  | |||||  | ||||||||||| ||| ||||||| ||||    
T  13910254 tgtcattagggtgatacttgtaagcctgattaatcgataaagactttgattagtcgttggccgttcatcaacgtactttgactccaatattctttaagtt 13910353  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgt 181  Q
    ||| |||||||||  |||||||||||||||||||||||||| ||| ||||||||||    
T  13910354 agggtaagagttgtgagtttgatcagtcgttttgaaatcttagaagtagtttatgt 13910409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 44213749 - 44213590
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||| || |||| ||||||| ||||||  | ||||||||| | | || |||||||||||| || | |||| ||||| |||||||||||||  |    
T  44213749 taggtcgaagactattgtcgttagggttagagttacaggcttgattaatcgttaaagagtttgattaatcattgaacgttcatccaagtactttgacctc 44213650  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaa 170  Q
    ||||||||| |||||||| |||||||  |||||||||| |||||||||||||||||||||    
T  44213649 aagattcttccagttagggtaagagttatgagtttgatgagtcgttttgaaatctttgaa 44213590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 15738456 - 15738634
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||||||| ||| || |||||||||||||| | || ||||||||||||||| | |||||||||||  || ||||| ||| |    
T  15738456 taggtcgaagaatgttgtcattagggttagatttttaagcttgattagtcggtaaagagtttgattagtcattgaacattcatttgagcactttcactgc 15738555  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||||   |||||||  ||||||| |  ||||||| ||| ||||||||| ||||||| || |||||||    
T  15738556 aagattctttcagttaaagtaagagttgtgagtttcaagagtcgttctgacatctttgaagtagtttaggttgaagaat 15738634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 35467123 - 35466962
Alignment:
Q  33 ttagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggat 132  Q
    ||||||||||||| ||||||||||||||| | |  | | |||||||| || | |||| ||||| |||||||||||||||||||||||||||||||||| |    
T  35467123 ttagggtgagagtggtaagcttgattagtcggtgaacaatttgattattcattgaacgttcatccaagtactttgactacaagattctttcagttagggt 35467024  T
Q  133 aagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||  ||||||||| ||||||| | | || |||||| ||||||| | |||||| ||||    
T  35467023 aagagttgcgagtttgattagtcgttctaacatgtttgaagtagtttaggccgaagagtctt 35466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15738622 - 15738767
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||| |||||||| |||||||| ||  |||||| |||||||||||||| | || ||||||||||||||| | |||||||  ||  |||||||| ||||     
T  15738622 taggttgaagaatattgtcattatggctagagttttaagcttgattagtcggtaaagagtttgattagtcattgaacatttgtttgagtactttcactat 15738721  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||    
T  15738722 aagattctttcagttagggtaagagttgtgagtctgatcagtcgtt 15738767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 8947560 - 8947442
Alignment:
Q  75 gattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaat 172  Q
    |||||||| | |||| ||||| |||||||||| | | ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  8947560 gattagtcattgaacgttcat-caagtactttcagtccaagattttttcagttaggataagagttgtgagtttgatcagtcgttttgaaatcttggaaat 8947462  T
Q  173 agtttatgtcgaagaatctt 192  Q
    |||||| ||| || ||||||    
T  8947461 agtttaggtcaaataatctt 8947442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 13914341 - 13914503
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| |||||||||| |  ||||||||||| |  | | ||||||||||| | |||||||||| |||||||||| ||||||||| ||||||||||    
T  13914341 tgtcattaggttgagagttgttaatttgattagttggtgaaaaatttgattagtcattgaacattcatccaagtactttaactacaaga-tctttcagtt 13914439  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    | | |||||||  |||||||||||||||||| ||| ||||| ||| | ||||| ||||| ||||    
T  13914440 atggtaagagttgtgagtttgatcagtcgttatgacatcttggaagttgtttaagtcgatgaat 13914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 13910070 - 13910236
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| | ||||| | ||||| ||||| |||| ||| |||||||||||   || | ||||| ||| |||| ||||| ||||||||||| ||||    
T  13910070 tgtcattagggttatagttgaaggcttggttagtcgataaagactttgattagtcagtgatcgttcatccaattactctgactccaagattctttaagtt 13910169  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | | |||||||||  |||||||| ||||||||||||||||||||| ||||||| ||  |||||||||    
T  13910170 aaggtaagagttgtgagtttgattagtcgttttgaaatctttgaagtagtttaggtgaaagaatctt 13910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 35467289 - 35467131
Alignment:
Q  33 ttagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggat 132  Q
    ||||||||||||| ||||||||||||||| | |  | | |||||||| ||   |||| |||||  ||||||||| ||| |||||||||||||||||||||    
T  35467289 ttagggtgagagtggtaagcttgattagtcggtgaacaatttgattattcaatgaactttcatctaagtactttcactgcaagattctttcagttaggat 35467190  T
Q  133 aagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||  |||||||||||||||||| ||| |  |||||| |||||||||  |||||||    
T  35467189 aagagttgtgagtttgatcagtcgttctgacacgtttgaagtagtttatgctgaagaat 35467131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 8947747 - 8947607
Alignment:
Q  54 tgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatcag 151  Q
    ||||||||| ||| ||||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||| ||||||| || ||   |||||||| |||||    
T  8947747 tgattagttaataaagagtttgattagtcgttgaacgttcatccaagtactttaactccaagattcttttagttagggtacgaattttgagtttaatcag 8947648  T
Q  152 tcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||| | || |||||| | | ||||||||| |||||||||    
T  8947647 tcgttctcaagtctttgtatttgtttatgtcaaagaatctt 8947607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 8947959 - 8947793
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagag-tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagt 126  Q
    |||||||||| ||||| |||||||||| |||||| | | || || ||||| ||||| |  |||||||||  |||||||||||||| ||||||||||||||    
T  8947959 tgtcattaggttgagatttgtaagctttattagtcggt-gaaagatttgactagtctttaaacattcatcaaagtactttgactataagattctttcagt 8947861  T
Q  127 taggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    || | |||||||  ||||||||||||||||||  || |||   ||| ||||||| |||||||||||||    
T  8947860 taaggtaagagttgtgagtttgatcagtcgttacgacatccaggaagtagtttaggtcgaagaatctt 8947793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 35467475 - 35467297
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||| ||||| | ||||| ||||||||||||||||  |  | | |||||||| ||   |||| |||||  ||||||||| |||      
T  35467475 taggtcgaagaatcttgtctttaggtttagagtggtaagcttgattagtttgtgaacaatttgattattcaatgaactttcatctaagtactttcactgt 35467376  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||||||||||||||| |||||||  |||||||||||||||||| ||| |  |||||| |||||||||  |||||||    
T  35467375 aagattctttcagttagggtaagagttgtgagtttgatcagtcgttctgacacatttgaagtagtttatgctgaagaat 35467297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 13909982 - 13910066
Alignment:
Q  106 tgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    ||||| ||| ||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  13909982 tgactccaatattctttaagttagggtaagagttatgagtttgatcagtcgttttgaaatctttgaattagtttaggtcaaagaa 13910066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 8947808 - 8947740
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagt 81  Q
    |||||||||||||  |||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||    
T  8947808 taggtcgaagaatcttgtcattaggatgagatttgtaagcttgattagtcgataaagagtatgattagt 8947740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 13914494 - 13914672
Alignment:
Q  16 gtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaag 115  Q
    ||||| ||||| ||||||||||  | ||||||||||||| ||||||   |  | | | |||||||||   |||||||||   ||||||||||||| ||||    
T  13914494 gtcgatgaatattgtcattaggtcgggagttgtaagctttattagtctgtgaaaaatatgattagtcaatgaacattcacctaagtactttgactccaag 13914593  T
Q  116 attctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||| |||| | |||||||  |||||||||| ||| ||| ||| ||||| ||| ||||||| || ||||||||||    
T  13914594 attctttcggttaaggtaagagttgtgagtttgataagttgttatgacatcttggaagtagtttaggttgaagaatctt 13914672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 8948140 - 8947959
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||| ||||  |||||||||| ||||||||||||| || |||||| | |  | | ||||||||||| | |||| || ||  ||||||||| |||||    
T  8948140 taggtcgatgaatcttgtcattaggttgagagttgtaagttttattagtcggtgaaaaatttgattagtcattgaacgttgatctaagtactttaactac 8948041  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||  || |||| |||||| ||| |||  |||||||||||| ||||| ||| ||||| ||| ||||||| || ||| ||||||    
T  8948040 aatgttttttcggttagggtaaaagttgtgagtttgatcattcgttatgacatcttggaagtagtttaagttgaataatctt 8947959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 13914657 - 13914727
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcg 83  Q
    ||||| |||||||  |||| ||||| ||||||||||||||||||||||| | || ||||||||||||||||    
T  13914657 taggttgaagaatcttgtctttaggttgagagttgtaagcttgattagtcggtaaagagtttgattagtcg 13914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 13914737 - 13914861
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatca 150  Q
    ||||||||| |||| ||||||||||||||| | |||| |||   |||||||||| ||| ||||||||||||||||||| ||| |||  |||||||||| |    
T  13914737 ttgattagtcgataaagagtttgattagtcattgaacgttc---caagtacttttactgcaagattctttcagttagggtaaaagttgtgagtttgatta 13914833  T
Q  151 gtcgttttgaaatctttgaaatagttta 178  Q
    ||  || | | ||||||||| |||||||    
T  13914834 gttattctaacatctttgaagtagttta 13914861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 13930587 - 13930517
Alignment:
Q  124 agttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||| |||||||||  |||||||||||||||||||| ||||||||| ||||||  ||| |||||||||    
T  13930587 agttagggtaagagttgtgagtttgatcagtcgttttgacatctttgaagtagtttgggtcaaagaatctt 13930517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 8946383 - 8946329
Alignment:
Q  331 ccccctataattttcacattttcgtttccctcttcccaaaaattatcaacgcgct 385  Q
    |||| ||||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  8946383 ccccatataattttcacattttggtttccctcctctcaaaaattatcaaagcgct 8946329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 13930329 - 13930241
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatcagtcgtt 156  Q
    ||||||||||||| | |||| ||||| |||||||||| ||| |||  |||| ||||||||| |||||   |||||||||||||||||||    
T  13930329 agtttgattagtcattgaacgttcatccaagtactttcactccaaagttctgtcagttagggtaagaattttgagtttgatcagtcgtt 13930241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 13914913 - 13915018
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||||||||| | ||||||||||||||| |||  |||||| || |    
T  13914913 gaacgttcatgcaggtagtttgactccaatattctttcagttagggcaagaattttgagtttgattattcgttttgaaatcttggaaggagtttaggtgg 13915012  T
Q  184 aagaat 189  Q
    ||||||    
T  13915013 aagaat 13915018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 13930351 - 13930318
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagt 61  Q
    |||||||||||||||||||||||| |||||||||    
T  13930351 tgtcattagggtgagagttgtaagtttgattagt 13930318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 123992 - 124144
Alignment:
Q  16 gtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaag 115  Q
    ||||||||||  ||||||| |||| |||||| |||||||||||||| |||| ||| ||||||||||||| |||||||||| |||||||||| ||| ||||    
T  123992 gtcgaagaatcttgtcattggggttagagttttaagcttgattagtcgataaagaatttgattagtcgttgaacattcatccaagtactttcactgcaag 124091  T
Q  116 attctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctt 166  Q
    ||||||||||| ||| |||||||  |||||||||||||||||| |||||||||    
T  124092 attctttcagtcagggtaagagttatgagtttgatcagtcgttctgaaatctt 124144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 34907541 - 34907375
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| ||||||||||||||||||||| |||| | ||||| ||||||| | |||||||||| |||||||||||||| |||||||||||||| |    
T  34907541 tgtcattagggttagagttgtaagcttgattagtcgataaatagtttcattagtcattgaacattcatccaagtactttgactccaagattctttcaggt 34907442  T
Q  128 aggataaga--gttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||  ||||   ||||||||||||| | |||||||||||||  || ||||||| || ||||||||||    
T  34907441 agggcaagaattttgagtttgatcaattgttttgaaatcttgtaagtagtttaggtggaagaatctt 34907375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 23484461 - 23484295
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| ||| ||||||||||| ||| ||||||   ||||||||||||||| | || | ||||| |||||| | ||||| ||||||||||||||||    
T  23484461 tcattagggttagatttgtaagcttggttatttgataacaagagtttgattagtcattgagcgttcatccaagtaatctgactccaagattctttcagtt 23484362  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||||  |||||||||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  23484361 agggtaagagttgtgagtttgatcagtcgttttgaaatcttggaagtagtttaggtcaaagaatctt 23484295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 23484647 - 23484481
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| ||| ||||||||||| ||| ||||||   ||||||||||||||| | || | ||||| |||||| | ||||| ||||||||||||||||    
T  23484647 tcattagggttagatttgtaagcttggttatttgataacaagagtttgattagtcattgagcgttcatccaagtaatctgactccaagattctttcagtt 23484548  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||||  |||| ||||||||||||||||||||||||| ||||||| || ||||||||||    
T  23484547 agggtaagagttgtgagttagatcagtcgttttgaaatctttgaagtagtttaggttgaagaatctt 23484481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 23484829 - 23484667
Alignment:
Q  34 tagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagga 131  Q
    |||||| |||| |||||||||| ||||| ||||   ||||||||||||||    || | ||||| ||||||||||| || |||||||||||||||||||     
T  23484829 tagggttagaggtgtaagcttggttagtcgataacaagagtttgattagtaagtgatcgttcatccaagtactttgtctccaagattctttcagttaggg 23484730  T
Q  132 taagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||  |||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  23484729 taagagttgtgagtttgatcagtcgttttgaaatcttagaagtagtttaggtcgaagaatctt 23484667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 23483938 - 23483757
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||| | |  |   ||| ||||||| | |||| ||||| |||||||||| |||||    
T  23483938 taggtcgaagaattttgtcattagggtgagagttttaagcttgattagtcggttcaattttttattagtcattgaactttcatccaagtactttaactac 23483839  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||| ||||||| |||||||  |||||||||| ||| ||| | ||||||| ||| ||||||| || ||||||||||    
T  23483838 aagattcttttagttagggtaagagttatgagtttgatgagttgttctaaaatcttggaagtagtttaggttgaagaatctt 23483757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 32058698 - 32058845
Alignment:
Q  32 attagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagga 131  Q
    |||||||||||||||||||||||| ||||| |||| | |||| |||||||  | |||| |||||  ||||||||| ||| |||||||||||||||| ||     
T  32058698 attagggtgagagttgtaagcttggttagtcgataaatagttggattagtaattgaacgttcatctaagtacttttactccaagattctttcagttgggg 32058797  T
Q  132 taagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttt 177  Q
    | |||||  |||||||||||||||||||||| ||||||||| ||||||    
T  32058798 ttagagttgtgagtttgatcagtcgttttgacatctttgaagtagttt 32058845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 32058860 - 32059011
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    ||||||| ||| |||||||||||||||||||||| |||| | ||||||||||||| | |||||||  |  |||||||||||||  |||||||||||||||    
T  32058860 tgtcatttgggcgagagttgtaagcttgattagtcgataaatagtttgattagtcattgaacatttgtctaagtactttgactcaaagattctttcagtt 32058959  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttt 177  Q
    ||| |||||||  |||||||| | ||||||| ||||||||| ||| ||||||    
T  32058960 agggtaagagttctgagtttgtttagtcgttatgaaatcttggaattagttt 32059011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 124578 - 124744
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| ||||||||||||| ||||| |||| | | |||||||||||   |||| |||||  | ||||||||||| || | |||||||||||    
T  124578 tgtcattagggtgaaagttgtaagcttggttagtcgataaatattttgattagtcagtgaacgttcatcgaggtactttgactccagggttctttcagtt 124677  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||  |||||||||||||||||| ||||||||| ||| ||||||| ||  |||||||||    
T  124678 agggtaagagttgtgagtttgatcagtcgttctgaaatcttggaagtagtttaggtgaaagaatctt 124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 32059026 - 32059168
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||||||||||||| ||||||||| |||| |||| |||||||||| | |||| ||||| |||||||||| ||| |||  |||| ||||||    
T  32059026 tgtcattagggtgagagttgtaagtttgattagtcgataaagaggttgattagtcattgaacgttcatccaagtactttcactccaaagttctgtcagtt 32059125  T
Q  128 aggataaga--gttgagtttgatcagtcgttttgaaatctttg 168  Q
    ||| |||||   ||||||||||||||||||| |||| ||||||    
T  32059126 agggtaagaattttgagtttgatcagtcgttctgaagtctttg 32059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 124435 - 124560
Alignment:
Q  69 gagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctt 166  Q
    |||||||||||||| | |||| ||||| |||||||||||||| ||||||| ||||||||||| |||||||  |||||||||||||| |||||||||||||    
T  124435 gagtttgattagtcattgaacgttcatccaagtactttgactccaagattatttcagttagggtaagagttgtgagtttgatcagttgttttgaaatctt 124534  T
Q  167 tgaaatagtttatgtcgaagaatctt 192  Q
     ||| ||||||| || ||| ||||||    
T  124535 ggaagtagtttaggttgaataatctt 124560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23484236 - 23484109
Alignment:
Q  67 gagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatc 164  Q
    |||||||||||||||| | |||| ||||| |||||||||||||| ||||||||||||| ||| | |||||||  |||||||||||||||||||||||||     
T  23484236 gagagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcaattatggtaagagttgtgagtttgatcagtcgttttgaaatt 23484137  T
Q  165 tttgaaatagtttatgtcgaagaatctt 192  Q
    || ||  |||| || |||||||||||||    
T  23484136 ttggaggtagtataggtcgaagaatctt 23484109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 34907666 - 34907541
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatct 165  Q
    ||||||||||||||| | |||| ||||| |||||||||||||| |||||| |||||||||||| |||||||||  |||||||| ||||||||||||||||    
T  34907666 agagtttgattagtcattgaacgttcatccaagtactttgactccaagat-ctttcagttagggtaagagttgtgagtttgattagtcgttttgaaatct 34907568  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    | ||| ||||||| ||  |||||||||    
T  34907567 tggaagtagtttaggttaaagaatctt 34907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 23485034 - 23484857
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||| || |||| ||||||| ||||||  | ||||||||||| | || ||||||| |||| || | |||| ||||| |||||||||||||| |    
T  23485034 taggtcgaagactattgtcgttagggttagagttacatgcttgattagtcgttaaagagtttcattattcattgaacgttcatccaagtactttgactcc 23484935  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    |||||||||  ||| ||| |||||||  |||||||||| ||||| ||||||||||||||| ||| ||| ||| |||||    
T  23484934 aagattcttctagtgagggtaagagttgtgagtttgatgagtcgctttgaaatctttgaagtaggttaggtctaagaa 23484857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 32059290 - 32059448
Alignment:
Q  33 ttagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggat 132  Q
    ||||||| |||||||| || | ||||||| |||| | ||||||||||||| | |||| |||||  ||||| ||||||| ||||||||||||||||| | |    
T  32059290 ttagggtaagagttgtgagttcgattagtcgataaatagtttgattagtcattgaacgttcatctaagtattttgactccaagattctttcagttaaggt 32059389  T
Q  133 aagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||  |||||||||| || |||| | | ||||||||||||||||| ||| ||||||    
T  32059390 aagagttgtgagtttgataagacgttcttacatctttgaaatagtttaggtcaaagaat 32059448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 34907322 - 34907196
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatct 165  Q
    ||||||| |||||||   |||||||||| || ||||||||||| ||||||||||||||||||| |||||||  |||||||||||| ||| | ||||||||    
T  34907322 agagttttattagtcagtgaacattcatccaggtactttgactccaagattctttcagttaggttaagagttgtgagtttgatcaatcgctgtgaaatct 34907223  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    | ||| ||||||| ||| |||||||||    
T  34907222 tagaagtagtttaggtcaaagaatctt 34907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 124762 - 124926
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgata--gagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||| |||||||| ||||||||||||||||||| ||||   |||||||||||||||   || | ||||| ||||||| |||||| |||||||||||| |    
T  124762 tgtcaatagggtgatagttgtaagcttgattagtcgataacaagagtttgattagtcagtgatcgttcatccaagtacattgactccaagattctttctg 124861  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    |||||  ||||||  |||||||||| ||| ||| ||| ||||||||| ||||||| ||| |||||    
T  124862 ttagggcaagagttgtgagtttgataagttgttatgacatctttgaattagtttaggtctaagaa 124926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 23480212 - 23480035
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||| || |||| ||||||| ||||||  | ||||||||||| | || ||||||| |||| || | |||| ||||| |||||||||||||| |    
T  23480212 taggtcgaagactattgtcgttagggttagagttacatgcttgattagtcgttaaagagtttcattattcattgaacgttcatccaagtactttgactcc 23480113  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    |||||||||  ||| ||| ||| |||  |||||||||| ||||| ||||||||||||||| ||| ||| ||| |||||    
T  23480112 aagattcttctagtaagggtaaaagttgtgagtttgatgagtcgctttgaaatctttgaagtaggttaggtctaagaa 23480035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 16534956 - 16535120
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    |||||||||||| | |||||||| |||||| | |||| ||  ||||||||||||| |  | |||||  | |||||||||||  || ||||||| ||||||    
T  16534956 tcattagggtgatacttgtaagcctgattaatcgataaagtctttgattagtcgttggccgttcatgaacgtactttgactctaatattctttaagttag 16535055  T
Q  130 gataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||||  |||||||| ||||||||||||||||| ||| |||| || |||||||||||||    
T  16535056 ggtaagagttgcgagtttgattagtcgttttgaaatcttagaagtagtctaggtcgaagaatctt 16535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 23484089 - 23483926
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    ||||||| || ||| ||||||||||| ||||| ||||   ||||||||||||||| | |||| ||||| |||||||||||||||||||||||||| | |     
T  23484089 tcattagagttagatttgtaagcttggttagtcgataacaagagtttgattagtcattgaacgttcatccaagtactttgactacaagattcttttaata 23483990  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||| |||||||  ||||||||||   |  || ||||||||| ||| ||||||| ||||||||||    
T  23483989 agggtaagagttgtgagtttgatggatttttctgaaatcttggaagtagtttaggtcgaagaat 23483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 16535467 - 16535632
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||    
T  16535467 tgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgtctacaaga-tctttcagtt 16535565  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | | |||||||  ||| |||||| ||| ||| ||| ||||| ||| | |||||||| ||||||||||    
T  16535566 atggtaagagttgtgaatttgattagttgttatgacatcttggaagttgtttatgttgaagaatctt 16535632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 32059436 - 32059591
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||| | || |||||||||||||||||||||| |||| | |||| | |||| | |||||| |  ||| |||||  | ||||||||||| |    
T  32059436 taggtcaaagaatattatcgttagggtgagagttgtaagcttaattaatcgataaatagttgggttagtcatttaacgttcatctaggtactttgactcc 32059535  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctt 166  Q
    || ||||||||||||||| ||||| |  |||||||||| ||||||| || ||||||    
T  32059536 aatattctttcagttagggtaagatttgtgagtttgatgagtcgttctgcaatctt 32059591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 16534682 - 16534756
Alignment:
Q  106 tgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| ||| ||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||    
T  16534682 tgactccaatattctttaagttagggtaagagttgtgagtttgatcagtcgttttgaaatctttgaattagttta 16534756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 124995 - 125098
Alignment:
Q  91 ttcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    |||||||||||||| ||||| ||||||| ||| |||| ||||||||||||  ||||| |||||| ||| |||| | || ||| ||||||| |||||||||    
T  124995 ttcattcaagtactctgactccaagattatttaagtttggataagagttgttagtttcatcagttgttctgaagtattggaagtagtttaggtcgaagaa 125094  T
Q  189 tctt 192  Q
    ||||    
T  125095 tctt 125098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 32059194 - 32059304
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    |||||| |||||||||||||||||| |||||| |||| | || | |||||||| |  ||| || ||  ||||||||| ||| || |||||||||||||||    
T  32059194 tcattaaggtgagagttgtaagcttaattagtcgataaatagctggattagtcattaaacgtttatataagtactttcactccaggattctttcagttag 32059293  T
Q  130 gataagagttg 140  Q
    | |||||||||    
T  32059294 ggtaagagttg 32059304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 9873575 - 9873456
Alignment:
Q  20 aagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattc 119  Q
    ||||||| |||||||||| |||||||||| |  ||||| ||| |||  | | ||||||||||| | |||||||||| |||||||| || |||||||| ||    
T  9873575 aagaataatgtcattaggttgagagttgttaatttgataagtcgatgaaaaatttgattagtcattgaacattcatccaagtactgtgtctacaaga-tc 9873477  T
Q  120 tttcagttaggataagagttg 140  Q
    ||||| ||| | |||||||||    
T  9873476 tttcatttatggtaagagttg 9873456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 9874301 - 9874262
Alignment:
Q  139 tgagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  9874301 tgagtttgatcagtcgttttgaaatctttgaagtagttta 9874262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 16535623 - 16535685
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagt 81  Q
    |||||||  ||| |||||| ||||||||||||||||||||||| | || ||||||||||||||    
T  16535623 gaagaatcttgttattaggttgagagttgtaagcttgattagtcggtaaagagtttgattagt 16535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 16534883 - 16534936
Alignment:
Q  139 tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||  |||||||||    
T  16534883 tgagtttgatcagtcgtttttaaatctttgaagtagtttaggtgaaagaatctt 16534936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 16535854 - 16535959
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||| ||||| | ||||||||||||||| ||| ||||||| || |    
T  16535854 gaacgttcatgcaggtagtttgactccaatattctttcagttagggcaagaattttgagcttgattattcgttttgaaatcttcgaagtagtttaggtgg 16535953  T
Q  184 aagaat 189  Q
    ||||||    
T  16535954 aagaat 16535959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 18454154 - 18454279
Alignment:
Q  15 ggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaa 114  Q
    |||||||||||  || ||||||||| || ||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||| |||    
T  18454154 ggtcgaagaatcttgccattagggttagtgttttaagcttgattagttgataaagagtttgattagtcgttgaacattcatccaagtactttcactccaa 18454253  T
Q  115 gattctttcagttaggataagagttg 140  Q
    |||||||||||||||| |||||||||    
T  18454254 gattctttcagttagggtaagagttg 18454279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 15571581 - 15571707
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatct 165  Q
    ||||||||||||||| | |||| ||||| |||||||||||||| ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  15571581 agagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcagttagggtaagagttgtgagtttgattagtcgttttgaaatct 15571680  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    | ||| ||||||| ||  |||||||||    
T  15571681 tggaagtagtttaggttaaagaatctt 15571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 12522776 - 12522923
Alignment:
Q  32 attagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagga 131  Q
    |||||||||||||||||||||||||||||| |||| | ||||  ||||||  | |||| |||||  ||||||||| ||| ||| |||||||||||||||     
T  12522776 attagggtgagagttgtaagcttgattagtcgataaatagttgaattagtaattgaacgttcatctaagtactttcactccaaaattctttcagttaggg 12522875  T
Q  132 taagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttt 177  Q
    |||||||  ||| |||||||||||||||||| ||||||||| ||||||    
T  12522876 taagagttgtgaatttgatcagtcgttttgacatctttgaagtagttt 12522923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 18454351 - 18454505
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||| ||||||  | ||||||||||| ||||   ||||||||||||||| | |||| ||||| |||||||||||||| ||||||||||||||    
T  18454351 tgtcattagggttagagttacatgcttgattagtcgataacaagagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcag 18454450  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| |||||||  |||||||||| ||||||| ||| ||||| ||| |||||||    
T  18454451 ttagggtaagagttgtgagtttgatgagtcgttatgacatcttggaagtagttta 18454505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 18453326 - 18453498
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagatt 118  Q
    |||||||  |||| ||||||||||||||||||||||||||||| ||||  |||||||||||||| | |||| ||||| |||||||||| ||  |||||||    
T  18453326 gaagaatcttgtcgttagggtgagagttgtaagcttgattagtcgataaggagtttgattagtcattgaacgttcatccaagtactttcaccgcaagatt 18453425  T
Q  119 ctttcagttaggataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||| ||||||| ||||||   ||||| | || ||||||| ||| ||||| ||| |||| || ||||||||||    
T  18453426 ctttgagttagggtaagagctgtgagtctaatgagtcgttatgacatcttggaagtagtctaggtcgaagaat 18453498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 18453986 - 18454167
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||| ||||||||| || | |||| ||||||||| |||  | | || |||||||| |  ||||||||| ||||||||||||||||    
T  18453986 taggtcgaagaatattgtcgttagggtgatagatttaaggttgattagtcgattaaaaattggattagtcattaaacattcatccaagtactttgactac 18454085  T
Q  113 aagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |  |||||||||||| || |||||||||  ||||| |  ||||||| ||||||||| ||| ||||||  |||||||||||||    
T  18454086 attattctttcagtttgggtaagagttgtaagtttaaagagtcgttctgaaatcttggaagtagtttgggtcgaagaatctt 18454167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 18454519 - 18454631
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||| | |||| ||||| |||||||||| |||  || ||||||| ||||    
T  18454519 tgtcgttagggtgagagttgtaagcttgattagtcgataaagagtttgactagtcattgaacgttcatccaagtactttcactgtaacattctttgagtt 18454618  T
Q  128 aggataagagttg 140  Q
    ||| |||||||||    
T  18454619 agggtaagagttg 18454631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 18453486 - 18453667
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||| ||||| |||||||| |||| ||||||||| |||  | | || || ||||||| ||||||||||  ||||| ||||||| |    
T  18453486 taggtcgaagaatattgtcgttaggatgagagttttaaggttgattagtcgattaaaaattggactagtcgttgaacattcatcaaagtaatttgactgc 18453585  T
Q  113 aagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||| || || |||||||||  |||||||| |||| || ||| || || ||| ||||| | |||||||||||||    
T  18453586 aagattctttcaatttgggtaagagttgtaagtttgatgagtcattctgacattttggaagtagttaaggtcgaagaatctt 18453667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 18453176 - 18453335
Alignment:
Q  35 agggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataa 134  Q
    ||||||||||||||| | ||||||||| |||  | | |||||||| || | |||| ||||| |||||||||||||| ||||||| ||||| ||||| |||    
T  18453176 agggtgagagttgtaggtttgattagtagatgaacaatttgattattcattgaacgttcatccaagtactttgactgcaagattatttcaattagggtaa 18453275  T
Q  135 gagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||  |||||||||| | ||||| ||| ||||| ||| ||||||| || ||||||||||    
T  18453276 gagttgtgagtttgatgattcgttatgacatcttggaagtagtttaagttgaagaatctt 18453335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 18453653 - 18453769
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||||||||||  |||| |  ||||||||||||||||||||| |||| |||| ||||||||||||||| | |||| ||||| |||||||||| ||| ||    
T  18453653 aggtcgaagaatcttgtcgtaggggtgagagttgtaagcttgactagtcgataaagagtttgattagtcattgaactttcatccaagtactttcactgca 18453752  T
Q  114 agattctttcagttagg 130  Q
    |||||| ||| ||||||    
T  18453753 agattcattcggttagg 18453769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 14493111 - 14493269
Alignment:
Q  31 cattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagg 130  Q
    |||||||||||||||||||||||| ||||||   || ||||||||||||||| | |||   |||| |||||||||| |||  ||||||||||||  ||||    
T  14493111 cattagggtgagagttgtaagcttaattagtcagtaaagagtttgattagtcattgaatggtcatccaagtactttcactctaagattctttcacgtagg 14493210  T
Q  131 ataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaaga 187  Q
     ||||||  |||||||||||||||| | |||| ||||| ||| ||||||| ||| ||||    
T  14493211 gtaagagttttgagtttgatcagtcatcttgacatcttggaagtagtttaggtcaaaga 14493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 6988644 - 6988716
Alignment:
Q  101 tactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaa 171  Q
    |||||||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||||||||||||||||    
T  6988644 tactttgactacaagattatttcatttagggtaagagttgtgagtttgatcagtcgttttgaaatctttgaaa 6988716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 15571725 - 15571821
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttca 124  Q
    |||||||||||| |||| |||||||||| ||||| |||| | ||||||||||||| | |||| ||||| | ||||| |||||| |||||||||||||    
T  15571725 tgtcattagggttagagatgtaagcttggttagtcgataaatagtttgattagtcattgaacgttcatccgagtacattgactccaagattctttca 15571821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 14493259 - 14493354
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttga 108  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||| | |  | | || |||||||| | ||||||||||  |||||||||||    
T  14493259 taggtcaaagattattgtcattagggtgagagttgtaagcttgattagtcggtgaaaaattggattagtcattgaacattcatctaagtactttga 14493354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 12522960 - 12523060
Alignment:
Q  70 agtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatcagtcgttttgaaatcttt 167  Q
    ||||||||||||| | |||| ||||| |||||||||| ||| |||  |||| ||||||||| |||||   ||||||||||||||||||| |||| |||||    
T  12522960 agtttgattagtcattgaacgttcatccaagtactttcactccaaagttctgtcagttagggtaagaattttgagtttgatcagtcgttctgaagtcttt 12523059  T
Q  168 g 168  Q
    |    
T  12523060 g 12523060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 14493350 - 14493436
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    ||||||||||||| |||||||||| | |||| |||||||  | |||||||| ||||||| |||||||  |||||||||| |||||||    
T  14493350 tttgattagtcgttgaacattcatcctagtattttgactcaaggattcttttagttagggtaagagttgtgagtttgattagtcgtt 14493436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 12522938 - 12522971
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagt 61  Q
    |||||||||||||||||||||||| |||||||||    
T  12522938 tgtcattagggtgagagttgtaagtttgattagt 12522971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 11234665 - 11234843
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| ||||||||| || |||||| |||||||||||||| | || ||| ||||||| ||| | |||||||||| ||||||||||||||||    
T  11234665 taggtcgaagaatattgtcattagagttagagttttaagcttgattagtcggtaaagaatttgattggtcattgaacattcatccaagtactttgactac 11234764  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    | |||||||||||||||| |||||||  |||||||||  | || || | ||||||| ||| ||||||| ||||||||||    
T  11234765 atgattctttcagttagggtaagagttgtgagtttgaagaatcattctaaaatcttagaagtagtttaggtcgaagaat 11234843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 11234831 - 11235000
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    |||||||||||||| |||||||||||| ||| ||||||||||| ||| | ||||   ||||||||||| ||| | |||| ||||||||| ||||||||||    
T  11234831 taggtcgaagaatattgtcattagggttagatttgtaagcttggttattcgataacaagagtttgattggtcattgaacgttcattcaaatactttgact 11234930  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
     ||||||| |||||| ||||  ||||||  |||||||||||||| ||||||||||||||||| |||||||    
T  11234931 ccaagattatttcagctagggaaagagttgtgagtttgatcagtagttttgaaatctttgaattagttta 11235000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 11235167 - 11235348
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||  | | | | | ||| | | ||||||||||  ||||||||||||| |    
T  11235167 taggtcgaagaatactgtcattagggtgagagttgtaagattgattagtcgattaaaattgttactagccattgaacattcatcaaagtactttgactcc 11235266  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||||| |||| ||  ||||||||||| |||||| ||| |||||  || |||||||  ||||||||||||    
T  11235267 aagattctttcagttagggtaagcgttgtgagtttgatcggtcgttctgacatcttgtaagtagtttagatcgaagaatctt 11235348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 11234499 - 11234677
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||| |||  ||| |||||||| |||||| |||||||||||||| |||| ||| ||||||||||| | |||||||||| |||||| ||||||||     
T  11234499 taggtcgaataatcttgttattagggttagagttttaagcttgattagtcgataaagaatttgattagtcattgaacattcatccaagtattttgactat 11234598  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||||||||||||||| || |||||||  ||| |||||  ||||||| ||||||| | ||| | ||||| ||||||||||    
T  11234599 aagattctttcagttggggtaagagttgtgactttgaagagtcgttctgaaatcatggaagtggtttaggtcgaagaat 11234677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 22256537 - 22256703
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| | |||||||| |||||| | |||| ||  ||||||||||||| |  | |||||  | ||||||||||| ||| ||||||| ||||    
T  22256537 tgtcattagggtgatacttgtaagcctgattaatcgataaagtctttgattagtcgttggccgttcatgaacgtactttgactccaatattctttaagtt 22256636  T
Q  128 aggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||||  |||||||| ||||||||||||||||| ||| |||| || |||||||||||||    
T  22256637 agggtaagagttgcgagtttgataagtcgttttgaaatcttagaagtagtctaggtcgaagaatctt 22256703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 11235014 - 11235179
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||| ||| ||||||||||| ||| | ||||   |||||||||||| || | |||| |||||  ||||||||||||| ||||||||||||||    
T  11235014 tgtcattagggttagatttgtaagcttggttattcgataacaagagtttgattattcattgaacgttcatcaaagtactttgactccaagattctttcag 11235113  T
Q  126 ttagg--ataagagttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||||  || |||  ||||||||||  || ||| ||| ||||| ||| |||| || ||||||||||    
T  11235114 ttagggaatgagatgtgagtttgatatgtggttctgacatcttagaagtagtctaggtcgaagaat 11235179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 22259521 - 22259686
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||    
T  22259521 tgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgtctacaaga-tctttcagtt 22259619  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |   |||||||  ||| |||||| ||| ||| ||| ||||| ||| | |||||||| ||||||||||    
T  22259620 atagtaagagttgtgaatttgattagttgttatgacatcttggaagttgtttatgttgaagaatctt 22259686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 22259677 - 22259740
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtc 82  Q
    |||||||  ||| |||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  22259677 gaagaatcttgttattaggttgagagttgtaagcttgattagtcggtaaagagtttgattagtc 22259740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 11234393 - 11234514
Alignment:
Q  73 ttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaa 170  Q
    |||||||||| | ||||||||||| || ||||||   || ||| |||||||| ||||| |||||||||  |||||||| ||||||| |||| || | |||    
T  11234393 ttgattagtcattgaacattcattaaaatactttccgtataagtttctttcaattagggtaagagttgtcagtttgataagtcgttctgaagtcatggaa 11234492  T
Q  171 atagtttatgtcgaagaatctt 192  Q
     ||||||| |||||| ||||||    
T  11234493 gtagtttaggtcgaataatctt 11234514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 22256466 - 22256519
Alignment:
Q  139 tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||  |||||||||    
T  22256466 tgagtttgatcagtcgttttgaagtctttgaagtagtttaggtgaaagaatctt 22256519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 22256301 - 22256339
Alignment:
Q  140 gagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  22256301 gagtgtgatcagtcgttttgaaatctttgaattagttta 22256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 22259908 - 22260013
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||||||||| | || |||||||||||| ||| ||||||| || |    
T  22259908 gaacgttcatgcaggtagtttgactccaatattctttcagttaggtcaagaattttgagtttgattattcattttgaaatcttcgaagtagtttaggtgg 22260007  T
Q  184 aagaat 189  Q
    ||||||    
T  22260008 aagaat 22260013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 47325227 - 47325055
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagatt 118  Q
    |||||||  |||| |||||||||||||||||||||||||||||  ||| ||||||||||||||| | |||| |||||  ||||||||| ||| |||||||    
T  47325227 gaagaatcttgtcgttagggtgagagttgtaagcttgattagtcaataaagagtttgattagtcattgaacgttcatctaagtactttcactgcaagatt 47325128  T
Q  119 ctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||| ||||||| |||||||  ||||| |||| ||||||| ||| ||||| ||| ||||||| ||||||||||    
T  47325127 ctttgagttagggtaagagttgtgagtctgatgagtcgttatgacatcttggaagtagtttaggtcgaagaat 47325055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 47340023 - 47339851
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagatt 118  Q
    |||||||  |||| |||||||||||||||||||||||||||||  ||| ||||||||||||||| | |||| |||||  ||||||||| ||| |||||||    
T  47340023 gaagaatcttgtcgttagggtgagagttgtaagcttgattagtcaataaagagtttgattagtcattgaacgttcatctaagtactttcactgcaagatt 47339924  T
Q  119 ctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||| ||||||| |||||||  ||||| |||| ||||||| ||| ||||| ||| ||||||| ||||||||||    
T  47339923 ctttgagttagggtaagagttgtgagtctgatgagtcgttatgacatcttggaagtagtttaggtcgaagaat 47339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 43265867 - 43265686
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  |||||||||| ||||||||||||  ||||||||| | |  | | ||||||||||| | |||||||||| ||||||||||||||||    
T  43265867 taggtcaaagaatcttgtcattaggttgagagttgtaaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgactac 43265768  T
Q  113 aagattctttcagttaggataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||| | ||||||   || ||||||||||||||| ||| ||||| ||| ||||||| ||||| |||||||    
T  43265767 aagattctttcagttatggtaagagctgtgcgtttgatcagtcgttatgacatcttggaagtagtttaagtcgatgaatctt 43265686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 13740066 - 13739940
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatct 165  Q
    ||||||||||||||| | |||| ||||| |||||||||||||| ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  13740066 agagtttgattagtcattgaacgttcatccaagtactttgactccaagattctttcagttagggtaagagttgtgagtttgattagtcgttttgaaatct 13739967  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    | ||| ||||||| ||  |||||||||    
T  13739966 tggaagtagtttaggttaaagaatctt 13739940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 13743381 - 13743213
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||| ||||||| |||||||||| ||||| ||||   |||||||||||||||   |||| ||||| |||||||||||||| ||||||||||||||    
T  13743381 tgtcattagtgtgagaggtgtaagcttggttagtcgataacaagagtttgattagtcagtgaacgttcatccaagtactttgactccaagattctttcag 13743282  T
Q  126 ttaggataaga--gttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||  ||||   ||||||||||||||||||||||||||||| ||  ||||||| ||  |||||||||    
T  13743281 ttagggcaagaattttgagtttgatcagtcgttttgaaatcttggatgtagtttaggttaaagaatctt 13743213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 43266032 - 43265852
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||| |||| || |||||| ||||||||||||||| ||||||||||| | |  | | ||||||||||| | |||||||||| |||||||||| | ||||    
T  43266032 aggtcaaagattattgtcatcagggtgagagttgtatgcttgattagtcggtgaacaatttgattagtcattgaacattcatccaagtactttcaataca 43265933  T
Q  114 agattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | ||||||||||||||  |||| ||  |||||||||||||||||| ||| ||||| ||| ||||||| ||| |||||||||    
T  43265932 atattctttcagttagagtaagcgttgtgagtttgatcagtcgttatgacatcttggaagtagtttaggtcaaagaatctt 43265852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 47324399 - 47324274
Alignment:
Q  15 ggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaa 114  Q
    |||||||||||  || ||||||||| || ||| |||| |||||||||||||| ||||||||||| ||||| |||||||||| |||||||||| ||| |||    
T  47324399 ggtcgaagaatcttgccattagggttagtgttttaaggttgattagttgataaagagtttgattggtcgttgaacattcatccaagtactttcactccaa 47324300  T
Q  115 gattctttcagttaggataagagttg 140  Q
     ||||||||||||||| |||||||||    
T  47324299 tattctttcagttagggtaagagttg 47324274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 47339195 - 47339070
Alignment:
Q  15 ggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaa 114  Q
    |||||||||||  || ||||||||| || ||| |||| |||||||||||||| ||||||||||| ||||| |||||||||| |||||||||| ||| |||    
T  47339195 ggtcgaagaatcttgccattagggttagtgttttaaggttgattagttgataaagagtttgattggtcgttgaacattcatccaagtactttcactccaa 47339096  T
Q  115 gattctttcagttaggataagagttg 140  Q
     ||||||||||||||| |||||||||    
T  47339095 tattctttcagttagggtaagagttg 47339070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 13742976 - 13742850
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatct 165  Q
    |||||||||||||||   |||||||||| || ||||||||||| |||| |||||| ||||||| |||||||  |||||||||||||||| ||||||||||    
T  13742976 agagtttgattagtcagtgaacattcatccaggtactttgactccaaggttcttttagttaggttaagagttgtgagtttgatcagtcgctttgaaatct 13742877  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    | ||| ||||||| ||| |||||||||    
T  13742876 tagaagtagtttaggtcaaagaatctt 13742850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 15781471 - 15781294
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||| || |||||||||||||    
T  15781471 taggtcaaagaatcatgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaggtactttgactac 15781372  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    |||| ||||||||||| | |||||||  ||||||| |||||||||| ||| ||||| ||| ||||||| ||||| ||||    
T  15781371 aaga-tctttcagttatggtaagagttgtgagtttaatcagtcgttatgacatcttggaagtagtttaagtcgatgaat 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 47324720 - 47324555
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagag--tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||  |||| |||||| |  ||| ||||| |||||||||| ||| ||||||||||| ||    
T  47324720 tgtcattagggtgagagttgtaagcttgattagtctataaagagtttttgtttagtcattcaacgttcatccaagtactttcactgcaagattctttgag 47324621  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||| | ||| |||  |||||||||| ||||||| | | ||||| ||| ||||||| ||||||||||    
T  47324620 ttaaggtaaaagttatgagtttgatgagtcgttataacatcttggaagtagtttaggtcgaagaat 47324555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 47339516 - 47339351
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagag--tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||  |||| |||||| |  ||| ||||| |||||||||| ||| ||||||||||| ||    
T  47339516 tgtcattagggtgagagttgtaagcttgattagtctataaagagtttttgtttagtcattcaacgttcatccaagtactttcactgcaagattctttgag 47339417  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||| | ||| |||  |||||||||| ||||||| | | ||||| ||| ||||||| ||||||||||    
T  47339416 ttaaggtaaaagttatgagtttgatgagtcgttataacatcttggaagtagtttaggtcgaagaat 47339351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 47324234 - 47324108
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||| ||||||  |||||||||||| |||||   | ||||||||||| |||| ||||||||||||||| | |||| ||||| |||||||||| ||| ||    
T  47324234 aggtcaaagaatcgtgtcattagggttagagtcacatgcttgattagtcgataaagagtttgattagtcattgaacgttcatccaagtactttcactgca 47324135  T
Q  114 agattctttcagttaggataagagttg 140  Q
    ||||||||| ||||||| |||||||||    
T  47324134 agattctttgagttagggtaagagttg 47324108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 47324567 - 47324386
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||| |||||||||||| | |||| ||||||||| |||  | | || |||||||| |  |||||| || ||||||||||||||||    
T  47324567 taggtcgaagaatattgtcgttagggtgagagatttaaggttgattagtcgattaaaaattggattagtcattaaacatttatccaagtactttgactac 47324468  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||| |||  || |||||||  |||||||||  |||| || ||||||||| ||| ||||||  |||||||||||||    
T  47324467 atgattcttttagtctgggtaagagttgtgagtttgaagagtcattctgaaatcttggaagtagtttgggtcgaagaatctt 47324386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 47339030 - 47338904
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||| ||||||  |||||||||||| |||||   | ||||||||||| |||| ||||||||||||||| | |||| ||||| |||||||||| ||| ||    
T  47339030 aggtcaaagaatcgtgtcattagggttagagtcacatgcttgattagtcgataaagagtttgattagtcattgaacgttcatccaagtactttcactgca 47338931  T
Q  114 agattctttcagttaggataagagttg 140  Q
    ||||||||| ||||||| |||||||||    
T  47338930 agattctttgagttagggtaagagttg 47338904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 47339363 - 47339182
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||| |||| |||||||||||| | |||| ||||||||| |||  | | || |||||||| |  |||||| || ||||||||||||||||    
T  47339363 taggtcgaagaatattgtcgttagggtgagagatttaaggttgattagtcgattaaaaattggattagtcattaaacatttatccaagtactttgactac 47339264  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||| |||  || |||||||  |||||||||  |||| || ||||||||| ||| ||||||  |||||||||||||    
T  47339263 atgattcttttagtctgggtaagagttgtgagtttgaagagtcattctgaaatcttggaagtagtttgggtcgaagaatctt 47339182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 43264871 - 43264720
Alignment:
Q  43 agttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--g 140  Q
    |||||| |||||| |||||||||| | ||||||||||||| | |||| ||||| |||||||||||| | || |||||||| ||||||| ||| ||||  |    
T  43264871 agttgtgagcttggttagttgataaatagtttgattagtcattgaacgttcatccaagtactttgaatccatgattcttttagttagggtaaaagtttgg 43264772  T
Q  141 agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| ||||||||||||||  |||||| |||  |||||| |||||| ||||||    
T  43264771 agtctgatcagtcgttttataatcttggaagcagtttaggtcgaataatctt 43264720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 43265293 - 43265174
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatcagtcgttttgaaatctttga 169  Q
    ||||||||||| | |||| ||||| || ||||||||||| |||||||||||||||||||  ||||   ||||||||||| ||||||||||||||||| ||    
T  43265293 tttgattagtcattgaacgttcatccaggtactttgactccaagattctttcagttagggcaagaattttgagtttgattagtcgttttgaaatcttgga 43265194  T
Q  170 aatagtttatgtcgaagaat 189  Q
    | ||||||| || |||||||    
T  43265193 agtagtttaggtggaagaat 43265174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 192
Target Start/End: Complemental strand, 43265475 - 43265337
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatca 150  Q
    ||||||||| |||| ||||||||||||||| | |||| |||   |||||||||| ||| ||||||||||||||||||  ||| |||||  ||||||||||    
T  43265475 ttgattagtcgataaagagtttgattagtcattgaacgttc---caagtactttcactgcaagattctttcagttagcgtaaaagttgtgagtttgatca 43265379  T
Q  151 gtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||| ||| ||||||||| |||||||  || |||||||||    
T  43265378 gtcgttctgacatctttgaagtagtttagatcaaagaatctt 43265337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 13743195 - 13743029
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||| ||||||| ||||||||||||||| |||||  ||| | ||||| ||||||| | |||| ||||| | |||||||||||| ||||||||||| || |    
T  13743195 tgtccttagggttagagttgtaagcttggttagtcaataaatagtttcattagtcattgaacgttcatccgagtactttgactccaagattcttttagct 13743096  T
Q  128 aggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||  |||| ||  |||||| |||| |||||||||||||||  || ||||||| || ||||||||||    
T  13743095 agggcaagaatttagagtttaatcaatcgttttgaaatcttgtaagtagtttaggtggaagaatctt 13743029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 47325067 - 47324886
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||||||||||| ||||  |||||| | |||| ||||||||| |||  | | || || ||||||| |||||||||| |||| | ||||||| |    
T  47325067 taggtcgaagaatactgtcgttagaatgagagctttaaggttgattagtcgattaaaaattggactagtcgttgaacattcatccaagcaatttgactgc 47324968  T
Q  113 aagattctttcagttaggataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||| | ||||||   |||||||||| |||| || ||| || || ||| ||||| | |||||||||||||    
T  47324967 aagattctttcagttatggtaagagctgtgagtttgatgagtctttctgacattttggaagtagttaaggtcgaagaatctt 47324886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 47339863 - 47339682
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||||||||||| ||||  |||||| | |||| ||||||||| |||  | | || || ||||||| |||||||||| |||| | ||||||| |    
T  47339863 taggtcgaagaatactgtcgttagaatgagagctttaaggttgattagtcgattaaaaattggactagtcgttgaacattcatccaagcaatttgactgc 47339764  T
Q  113 aagattctttcagttaggataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||| | ||||||   |||||||||| |||| || ||| || || ||| ||||| | |||||||||||||    
T  47339763 aagattctttcagttatggtaagagctgtgagtttgatgagtctttctgacattttggaagtagttaaggtcgaagaatctt 47339682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 47324900 - 47324756
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||||||||||  |||| |  |||||||| |||||||||||| |||| |||| ||||||||||||||| | |||| ||||| |||||||||| ||| ||    
T  47324900 aggtcgaagaatcttgtcgtaggggtgagacttgtaagcttgactagtcgataaagagtttgattagtcattgaacgttcatccaagtactttcactcca 47324801  T
Q  114 agattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    |||||| ||| |||||| ||| | |  |||| |||||||||||||    
T  47324800 agattcattcggttagggtaaaatttgtgagcttgatcagtcgtt 47324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 47339696 - 47339552
Alignment:
Q  14 aggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactaca 113  Q
    ||||||||||||  |||| |  |||||||| |||||||||||| |||| |||| ||||||||||||||| | |||| ||||| |||||||||| ||| ||    
T  47339696 aggtcgaagaatcttgtcgtaggggtgagacttgtaagcttgactagtcgataaagagtttgattagtcattgaacgttcatccaagtactttcactcca 47339597  T
Q  114 agattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    |||||| ||| |||||| ||| | |  |||| |||||||||||||    
T  47339596 agattcattcggttagggtaaaatttgtgagcttgatcagtcgtt 47339552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 15780886 - 15780759
Alignment:
Q  64 atagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaa 161  Q
    ||||| ||||||||||||| | |||| ||||| || ||| ||||||| ||| |||||||||||||||  |||| ||  ||||||||| ||||||||||||    
T  15780886 atagatagtttgattagtcattgaacgttcatgcaggtagtttgactccaatattctttcagttagggcaagaattttgagtttgattagtcgttttgaa 15780787  T
Q  162 atctttgaaatagtttatgtcgaagaat 189  Q
    ||||| ||| ||||||| || |||||||    
T  15780786 atcttggaagtagtttaggtggaagaat 15780759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 53 - 192
Target Start/End: Complemental strand, 15781060 - 15780922
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatca 150  Q
    ||||||||| |||| ||||||||||||||| | ||||||||   |||||||||| ||| ||||||||||||||||||| ||| ||||  ||||||||| |    
T  15781060 ttgattagtcgataaagagtttgattagtcattgaacattc---caagtactttcactgcaagattctttcagttagggtaaaagttgcgagtttgatta 15780964  T
Q  151 gtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||  || ||| ||||||||| |||||||  || |||||||||    
T  15780963 gttattctgacatctttgaagtagtttagatcaaagaatctt 15780922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 13743525 - 13743399
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatct 165  Q
    ||||||||||||||  | |||| ||||| || ||||||||| |  |||||||||||||||||| |||||||  |||||||||||||||||| || |||||    
T  13743525 agagtttgattagttattgaacgttcatccaggtactttgattcaaagattctttcagttaggttaagagttgtgagtttgatcagtcgttgtggaatct 13743426  T
Q  166 ttgaaatagtttatgtcgaagaatctt 192  Q
    |  || ||||||| ||| |||||||||    
T  13743425 tataagtagtttaggtcaaagaatctt 13743399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 43265125 - 43265017
Alignment:
Q  86 gaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcg 183  Q
    |||| ||||| || ||| |||||||  |||||||||||||||||| |||||||||  |||||||||||||||| ||| ||||| ||| ||||||| |||     
T  43265125 gaacgttcatccaggtaatttgactctaagattctttcagttagggtaagagttgtgagtttgatcagtcgttctgatatcttggaagtagtttaagtca 43265026  T
Q  184 aagaatctt 192  Q
    |||||||||    
T  43265025 aagaatctt 43265017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 13739922 - 13739826
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttca 124  Q
    |||||||||||| |||| |||||||||| ||||| |||| | ||||||||||||| | |||| ||||| | ||||| |||||| |||||||||||||    
T  13739922 tgtcattagggttagagatgtaagcttggttagtcgataaatagtttgattagtcattgaacgttcatccgagtacattgactccaagattctttca 13739826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 15780650 - 15780561
Alignment:
Q  91 ttcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| |||||||||||||| ||| ||||||||||||||| |||||||  || ||||||  ||||||||||||||||||| | |||||||    
T  15780650 ttcatccaagtactttgactccaaaattctttcagttagggtaagagttgtgcgtttgaaaagtcgttttgaaatctttggattagttta 15780561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 47325373 - 47325283
Alignment:
Q  35 agggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||||||| ||||||||||| |||  | | |||||||| || | |||| ||||| |||||||||||||| ||||||||||||||    
T  47325373 agggtgagagttgtaggcttgattagtcgatgaacaatttgattattcattgaacgttcatccaagtactttgactgcaagattctttcag 47325283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 47340169 - 47340079
Alignment:
Q  35 agggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||||||| ||||||||||| |||  | | |||||||| || | |||| ||||| |||||||||||||| ||||||||||||||    
T  47340169 agggtgagagttgtaggcttgattagtcgatgaacaatttgattattcattgaacgttcatccaagtactttgactgcaagattctttcag 47340079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 15781140 - 15781071
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtc 82  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  15781140 taggttgaagaatcttgtcattaggttgagagttgtaagcttgattagtcggtaaagagtttgattagtc 15781071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 36393035 - 36392991
Alignment:
Q  338 taattttcacattttcgtttccctcttcccaaaaattatcaacgc 382  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  36393035 taattttcacatttttgtttccctcttcccaaaaattatcaacgc 36392991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 15781303 - 15781125
Alignment:
Q  16 gtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaag 115  Q
    ||||| ||||| ||||||||||  | ||||||||||||| ||||||   |  | | ||||||||||| | |||||||||   ||||||||||||| ||||    
T  15781303 gtcgatgaatattgtcattaggtcgggagttgtaagctttattagtctgtgaaaaatttgattagtcattgaacattcacctaagtactttgactccaag 15781204  T
Q  116 attctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||| |||| | |||||||  |||||||||| | | ||| |||  |||| ||| ||||||| || ||||||||||    
T  15781203 attctttcggttaaggtaagagttgtgagtttgataatttgttatgacttcttggaagtagtttaggttgaagaatctt 15781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 43265642 - 43265520
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttga 169  Q
    ||||||||||| | |||||||||   |||||||||||||||||||||||||| |||| | |||||||  |||||||||| | | ||| |||  |||| ||    
T  43265642 tttgattagtcattgaacattcacctaagtactttgactacaagattctttcggttaaggtaagagttgtgagtttgataaattgttatgacgtcttgga 43265543  T
Q  170 aatagtttatgtcgaagaatctt 192  Q
    | ||||||| || ||||||||||    
T  43265542 agtagtttaggttgaagaatctt 43265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 43264702 - 43264538
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    ||||||||||| || ||||||||||||| ||||| ||||   | | ||||||||||| | |||| ||||| |||||||||| | | ||||| |||||| |    
T  43264702 tgtcattagggcgatagttgtaagcttggttagtagataacaaaaatttgattagtcattgaacgttcatccaagtactttcaatgcaagactctttcgg 43264603  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    ||||| ||| | |  |||||||||| ||||||| ||| ||||| ||| ||||||| ||| |||||    
T  43264602 ttagggtaaaatttgtgagtttgattagtcgttgtgacatcttcgaagtagtttaggtcaaagaa 43264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 36227496 - 36227557
Alignment:
Q  326 attttccccctataattttcacatttt-cgtttccctcttcccaaaaattatcaacgcgctc 386  Q
    |||| ||||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36227496 atttcccccctccaattttcacatttttcgtttccctcttcccaaaaattatcaaggcgctc 36227557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 43263860 - 43263809
Alignment:
Q  328 tttccccctataattttcacattttcgtttccctcttcccaaaaattatcaa 379  Q
    |||||||| ||||||||||| |||||||||||||||||| |||| |||||||    
T  43263860 tttccccccataattttcacgttttcgtttccctcttccgaaaatttatcaa 43263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 43265535 - 43265465
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcg 83  Q
    ||||| |||||||  |||||||||| |||||||||| || ||||||||| | |  ||||||||||||||||    
T  43265535 taggttgaagaatcttgtcattaggttgagagttgtgagtttgattagtcggtgaagagtttgattagtcg 43265465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 11763105 - 11762942
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | |||| ||||| ||| |||||||||| ||||||||||||||||    
T  11763105 tgtcattagggtgagagttgtaagcttgattagttgataaaaagtttgattagtccttgaacgttcatccaactactttgactccaagattctttcagtt 11763006  T
Q  128 aggataaga--gttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaat 189  Q
    ||  |||||   |||||||| | || |||||||||  |||||| | ||||||| ||| ||||||    
T  11763005 agagtaagaattttgagtttcaccactcgttttgaggtctttgtagtagtttaggtcaaagaat 11762942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 51858209 - 51858080
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||| |||||||||| |||||  |||||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||| |||||||| ||||| |    
T  51858209 tgtcattaaggtgagagttttaagcaggattagttgataaagagtttgattagtcgttgaacgttcatccaagtactttcactccaagattcgttcagct 51858110  T
Q  128 aggataagagt--tgagtttgatcagtcgt 155  Q
    ||| |||||||  |||||||||||||||||    
T  51858109 agggtaagagttgtgagtttgatcagtcgt 51858080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 178
Target Start/End: Complemental strand, 49791349 - 49791182
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  |||||||||| ||||||||||||  |||||||||   |  | | ||||||||||| | ||| |||||| ||||||||||||||||    
T  49791349 taggtcaaagaatcttgtcattaggttgagagttgtaaatttgattagtctgtgaaaaatttgattagtcattgaatattcatccaagtactttgactac 49791250  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||||||||||||||   |||||||  |||||||||||||||||| ||| ||||| ||| |||||||    
T  49791249 aagattctttcagttatagtaagagttgtgagtttgatcagtcgttatgacatcttggaagtagttta 49791182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 49791976 - 49791818
Alignment:
Q  31 cattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagg 130  Q
    |||||||||||||||||||||||| ||||||   || ||||||||||||||| | |||   |||| |||||||||| |||  ||||||||||||  ||||    
T  49791976 cattagggtgagagttgtaagcttaattagtcagtaaagagtttgattagtcattgaatggtcatccaagtactttcactctaagattctttcacgtagg 49791877  T
Q  131 ataagag--ttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaaga 187  Q
     ||||||  |||||||||||||||||| |||| ||||||||| ||||||| ||| ||||    
T  49791876 gtaagagttttgagtttgatcagtcgtcttgacatctttgaagtagtttaggtcaaaga 49791818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 11763638 - 11763457
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  ||||| || |||||  ||| |||||||||||| ||| |  | | |||||||||| || |||||||||| |||||||||||||| |    
T  11763638 taggtcgaagaatcttgtcactaaggtgattgttataagcttgattatttggtgaaaaatttgattagttgttgaacattcatccaagtactttgactgc 11763539  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||| ||||| |||||||  ||||||||||  |||||| |   ||||| ||| ||||||| |||||||||||||    
T  11763538 aagattctttcacttagggtaagagttgtgagtttgattggtcgttattctatcttggaagtagtttaggtcgaagaatctt 11763457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 51858324 - 51858227
Alignment:
Q  96 tcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  51858324 tcaagtactttcacttcaagatttttt-agttaggataagagttgtgagtttgatcagtcgttttgaaatcttggaaatagtttaggtcaaagaatctt 51858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 11763246 - 11763141
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatca 150  Q
    ||||||||| |||| ||||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||||||||||| |||||   || ||||||||||    
T  11763246 ttgattagtcgataaagagtttgattagtcgttgaacgttcatccaagtactttcactgcaagattctttcagttagggtaagaatttttagtttgatca 11763147  T
Q  151 gtcgtt 156  Q
    ||||||    
T  11763146 gtcgtt 11763141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 11763970 - 11763825
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||  ||  | | ||| ||| ||| | |||||||||| | ||||| |||||| |    
T  11763970 taggtcgaagagtattgtcgttagggtgagagttttaagcttgattagtcaattaaaatttttattggtcattgaacattcatcctagtacattgactgc 11763871  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    |||||||||| ||||||| |||||||  ||||||||||||||||||    
T  11763870 aagattctttgagttagggtaagagttgtgagtttgatcagtcgtt 11763825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 51858024 - 51857856
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||| ||||||  | | ||||||||||||||   |||||||||||| || |  ||| ||||| |||||||||||||| ||||||| ||||||    
T  51858024 tgtcattagggttagagttacaggtttgattagttgataacaagagtttgattaatcattcaacgttcatccaagtactttgactccaagattatttcag 51857925  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||| |||||||  |||||||||  ||||||| |||||| || ||| |||| || |||||||||||||    
T  51857924 ttagggtaagagtcgtgagtttgaagagtcgttctgaaattttggaagtagtgtaggtcgaagaatctt 51857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 11763799 - 11763623
Alignment:
Q  18 cgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagat 117  Q
    |||||| || |||||||||||||||||||||||| |||||||||  ||  |   ||| ||||||| |  ||||||||| |||||||| | ||| || |||    
T  11763799 cgaagagtattgtcattagggtgagagttgtaagattgattagtgaattaaattttttattagtcatttaacattcatccaagtactcttactgcatgat 11763700  T
Q  118 tctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||||| | |||||||||  |||||||||||||||| |   ||||| ||| ||||||| |||||||||||||    
T  11763699 tctttcagttaaggtaagagttgtgagtttgatcagtcgttattctatcttggaagtagtttaggtcgaagaatctt 11763623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 49791124 - 49791002
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttga 169  Q
    ||||||||||| | ||||||||||  ||||||||||||| |||||||||||| |||| | |||||||  |||||||||||||| ||| ||| ||||| ||    
T  49791124 tttgattagtcattgaacattcatctaagtactttgactgcaagattctttcggttaaggtaagagttgtgagtttgatcagttgttatgacatcttgga 49791025  T
Q  170 aatagtttatgtcgaagaatctt 192  Q
    | ||||||| || ||||||||||    
T  49791024 agtagtttaggttgaagaatctt 49791002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 11762954 - 11762773
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||| ||||||  ||| |||||||||| ||||||||| |||||||||||||  | | || ||||||||   |||| ||||| |||||||||||||| |    
T  11762954 taggtcaaagaatgttgtgattagggtgatagttgtaagattgattagttgattaacatttggattagtcaatgaacgttcatccaagtactttgactcc 11762855  T
Q  113 aagattctttcagttaggataaga--gttgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |  ||||||||||||||| |||||   |||||||| || ||||||| |||  |||||| ||||||||| ||| || ||||||    
T  11762854 agtattctttcagttagggtaagaattttgagtttcattagtcgttatgaggtctttgtaatagtttaggtcaaataatctt 11762773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 53 - 192
Target Start/End: Complemental strand, 49790957 - 49790819
Alignment:
Q  53 ttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatca 150  Q
    ||||||||| |||| ||||||||||||||| | |||| |||   |||||||||| ||||||| ||||||||||||||| ||| |||  |||||||||| |    
T  49790957 ttgattagtcgataaagagtttgattagtcattgaacgttc---caagtacttttactacaatattctttcagttagggtaaaagttgtgagtttgatta 49790861  T
Q  151 gtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||  || ||||||||| |||||||  || |||||||||    
T  49790860 gtcgttcagacatctttgaagtagtttagatcaaagaatctt 49790819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 11763472 - 11763327
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactac 112  Q
    |||||||||||||  |||||||| | |||||||  ||| |||||||||| | |  | | ||||||||||| |  |||||| || |||| ||||||||| |    
T  11763472 taggtcgaagaatcttgtcattaagttgagagtgttaatcttgattagtcggtgaaaaatttgattagtcttaaaacattaatccaagaactttgactgc 11763373  T
Q  113 aagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    ||| |||||||||||||| |||||||  ||||||||||||||||||    
T  11763372 aagtttctttcagttagggtaagagttgtgagtttgatcagtcgtt 11763327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 11762764 - 11762651
Alignment:
Q  15 ggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaa 114  Q
    |||| ||||||  ||||||||||||  |||||||||| ||| ||||| |||| |  |||||||||||| | |||| ||||||||| ||||||||||  ||    
T  11762764 ggtcaaagaatgttgtcattagggttggagttgtaagattggttagtcgataaaatgtttgattagtccttgaacgttcattcaactactttgactcaaa 11762665  T
Q  115 gattctttcagtta 128  Q
    ||||||||||||||    
T  11762664 gattctttcagtta 11762651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 11763313 - 11763236
Alignment:
Q  6 agtagcataggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcg 83  Q
    |||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||   || ||||||||||||||||    
T  11763313 agtagcataggtcgaaaaatattgtcattaggatgagtgttgtaagcttgattagtcagtaaagagtttgattagtcg 11763236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 49791737 - 49791651
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgtt 156  Q
    ||||||||||||| |||||||||| | ||||||||||||  | |||||||| ||||||| |||||||  ||||||||||||||||||    
T  49791737 tttgattagtcgttgaacattcatcctagtactttgactcgaggattcttttagttagggtaagagttgtgagtttgatcagtcgtt 49791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 49791828 - 49791733
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttga 108  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||   |  | | || |||||||| ||||||||||||  |||||||||||    
T  49791828 taggtcaaagattattgtcattagggtgagagttgtaagcttgattagtctgtgaaaaattggattagtcatcgaacattcatctaagtactttga 49791733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 49791017 - 49790947
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcg 83  Q
    ||||| |||||||  |||||||||| |||||||||||||||||||||||   || ||||||||||||||||    
T  49791017 taggttgaagaatcttgtcattaggttgagagttgtaagcttgattagtcagtaaagagtttgattagtcg 49790947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 51857295 - 51857242
Alignment:
Q  324 acattttccccc-tataattttcacattttcgtttccctcttcccaaaaattat 376  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  51857295 acattttcccccatataattttcacattttggtttccctcctcccaaaaattat 51857242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 51857871 - 51857823
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagt 61  Q
    |||||||||||||  ||||||||| || |||||| ||||||||||||||    
T  51857871 taggtcgaagaatcttgtcattagagttagagttttaagcttgattagt 51857823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 1e-32; HSPs: 9)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 5200 - 5034
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||| ||||||||||||||| ||||| |||| | ||||||||||||| | |||| ||||| |||||||| ||||| ||||||||||||||||    
T  5200 tgtcattagggttagagttgtaagcttggttagtcgataaatagtttgattagtcattgaacgttcatccaagtactctgactccaagattctttcagtt 5101  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||  ||||||||||||||| ||  ||| ||||||   ||||||| ||| |||||||||    
T  5100 agggtaagagttgtgagtttgatcagtcattaagaagtctttgtggtagtttaggtcaaagaatctt 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 5016 - 4848
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||| | ||||||||||||| ||||| ||||   | ||||||||||||| | |||||||||| |||||||||||||| || ||||||||| |    
T  5016 tgtcattagggtcatagttgtaagcttggttagtggataacaaaagtttgattagtcattgaacattcatccaagtactttgactccatgattctttcgg 4917  T
Q  126 ttaggataagagtt--gagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||| ||| ||||  ||||||| ||||||||||||||||||| |||  |||||| |||||| ||||||    
T  4916 ttagggtaaaagtttggagtttgttcagtcgttttgaaatcttggaagcagtttaggtcgaataatctt 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 5386 - 5218
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatag--agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcag 125  Q
    |||||||||||||| ||||||||||||| ||||| |||    | | ||||||||||| | |||| ||||| ||| |||| ||||| |||||||||||||     
T  5386 tgtcattagggtgatagttgtaagcttggttagtagatgacaaaaatttgattagtcattgaacgttcatccaaatactctgactccaagattctttcaa 5287  T
Q  126 ttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||| |||||||  |||||||||||| |||||  ||| |||||| | ||||||| ||| |||||||||    
T  5286 ttagggtaagagttgtgagtttgatcaatcgttaagaagtctttgtagtagtttaggtcaaagaatctt 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 5867 - 5742
Alignment:
Q  68 agagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagtt--gagtttgatcagtcgttttgaaatct 165  Q
    ||||||||||||||| | | ||||| || ||| ||||||||||  |||||||||||||||||| ||||||||  | ||||||| |||| |||||||||||    
T  5867 agagtttgattagtcattgcacattaatccaaatactttgactctaagattctttcagttagggtaagagttgcgtgtttgattagtcattttgaaatct 5768  T
Q  166 ttgaaatagtttatgtcgaagaatct 191  Q
    ||||| ||| ||| ||| ||||||||    
T  5767 ttgaattaggttaggtctaagaatct 5742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 5507 - 5404
Alignment:
Q  91 ttcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaa 188  Q
    ||||| |||||||| || || ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| |||  | |||| |||||| ||    
T  5507 ttcatccaagtactctgtctccaagattctttcagttagggtaagagttgtgagtttgatcagtcgttttgaaatcttggaagaaatttaggtcgaataa 5408  T
Q  189 tctt 192  Q
    ||||    
T  5407 tctt 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 5711 - 5604
Alignment:
Q  73 ttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaa 170  Q
    |||||||||| |||| |||| || ||| |||||||||| || |||||||||||||||| | |||||  |||||||||| ||| ||| ||| |||||||||    
T  5711 ttgattagtcatcgatcattgatccaactactttgactccaggattctttcagttagggtgagagttgtgagtttgataagttgttatgacatctttgaa 5612  T
Q  171 atagttta 178  Q
     |||||||    
T  5611 ttagttta 5604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 6030 - 5939
Alignment:
Q  72 tttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaa 161  Q
    |||| |||||| |||||| || || |||||||||| ||| ||||| ||||| ||||||| |||||||||  |||||||||||||||| ||||    
T  6030 tttgtttagtcatcgaacgtttatccaagtactttcactgcaagaatctttgagttagggtaagagttgtgagtttgatcagtcgttgtgaa 5939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 29256 - 29091
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||||||| | ||||||| ||| ||||| ||| |  | ||||||||||| | |||| ||||| ||| |||| ||||| | ||||||||  ||||    
T  29256 tgtcattagggtgataattgtaaggttggttagtagat-gccaatttgattagtcattgaacgttcatccaaatactctgactcctagattcttcaagtt 29158  T
Q  128 aggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||| |||||||  ||||||||||| ||||||  ||| |||||| |  |||||| || ||||||||||    
T  29157 agggtaagagttgtgagtttgatcggtcgttaagaagtctttgtagcagtttaggttgaagaatctt 29091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 4863 - 4696
Alignment:
Q  13 taggtcgaagaatactgtcattagggtgagagttgtaagcttgattagttgata--gagagtttgattagtcgtcgaacattcattcaagtactttgact 110  Q
    ||||||||| |||  |||||||||||||| ||||||||||||| ||||| ||||   | | ||||||||||| | |||| ||| | |||||||||| | |    
T  4863 taggtcgaataatcttgtcattagggtgatagttgtaagcttggttagtagataacaaaaatttgattagtcattgaacgttcttccaagtactttcaat 4764  T
Q  111 acaagattctttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtt 176  Q
     ||||| | |||| |||||| ||| | |  |||||||||| ||||||| ||| ||||| ||| |||||    
T  4763 gcaagactttttcggttagggtaaaatttgtgagtttgattagtcgttgtgacatcttcgaagtagtt 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 7e-22; HSPs: 6)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 82169 - 82333
Alignment:
Q  30 tcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttag 129  Q
    |||||||||| | | |||||||| |||||| | |||| ||  ||||||||||||| |  | |||||  | ||||| ||||| ||| ||||||| ||||||    
T  82169 tcattagggttatacttgtaagcctgattaatcgataaagtctttgattagtcgttggccgttcatgaacgtactgtgactccaatattctttaagttag 82268  T
Q  130 gataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    | |||||||||  |||||||||||||||||||||||||| ||| |||| || |||||||||||||    
T  82269 ggtaagagttgcgagtttgatcagtcgttttgaaatcttagaagtagtctaggtcgaagaatctt 82333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 84091 - 83987
Alignment:
Q  64 atagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttaggataaga--gttgagtttgatcagtcgttttgaa 161  Q
    ||||| ||||||||||||| | |||| ||||| || ||| ||||||| ||| |||||||||||||||  ||||   ||||||||||| | ||||||||||    
T  84091 atagatagtttgattagtcattgaacgttcatgcaggtagtttgactccaatattctttcagttaggtcaagaattttgagtttgattattcgttttgaa 83992  T
Q  162 atctt 166  Q
    |||||    
T  83991 atctt 83987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 84476 - 84377
Alignment:
Q  28 tgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagtt 127  Q
    |||||||||| |||||||||| |  ||||||||| | |  | | ||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||    
T  84476 tgtcattaggttgagagttgttaatttgattagtcggtgaaaaatttgattagtcattgaacattcatccaagtactttgtctacaaga-tctttcagtt 84378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 84320 - 84257
Alignment:
Q  19 gaagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtc 82  Q
    |||||||  ||| |||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  84320 gaagaatcttgttattaggttgagagttgtaagcttgattagtcggtaaagagtttgattagtc 84257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 82096 - 82149
Alignment:
Q  139 tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||  |||||||||    
T  82096 tgagtttgatcagtcgttttgaagtctttgaagtagtttacgtgaaagaatctt 82149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 81931 - 81969
Alignment:
Q  140 gagtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  81931 gagtgtgatcagtcgttttgaaatctttgaattagttta 81969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 5253 - 5416
Alignment:
Q  31 cattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattctttcagttagg 130  Q
    ||||| ||||| | |||||||| |||||| | |||| || |||||||||||||| |  | |||||  | ||||||||||| ||| ||||||| ||| |||    
T  5253 cattatggtgatacttgtaagcctgattaatcgataaagtgtttgattagtcgttggccgttcatgaacgtactttgactccaatattctttaagtcagg 5352  T
Q  131 ataagagttg--agtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
     ||| |||||  |||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  5353 gtaaaagttgcgagtttgatcagttgttttgaaatcttagaagtagtctatgtcgaagaatctt 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 5937 - 6110
Alignment:
Q  20 aagaatactgtcattagggtgagagttgtaagcttgattagttgatagagagtttgattagtcgtcgaacattcattcaagtactttgactacaagattc 119  Q
    ||||||| |||||||||| |||||||||| |  ||||||| | |||  | | ||||||||||| | |||||||||| |||||||| || |||||||| ||    
T  5937 aagaataatgtcattaggttgagagttgttaatttgattattcgatgaaaaatttgattagtcattgaacattcatccaagtactctgtctacaaga-tc 6035  T
Q  120 tttcagttaggataagagt--tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    ||||||||| | |||||||  ||| |||||||||| ||| ||| ||||| ||| | |||||||| ||||||||||    
T  6036 tttcagttatggtaagagttgtgaatttgatcagttgttatgacatcttggaagttgtttatgttgaagaatctt 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 5179 - 5232
Alignment:
Q  139 tgagtttgatcagtcgttttgaaatctttgaaatagtttatgtcgaagaatctt 192  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  5179 tgagtttgatcagtcgttttgaaatctttgaagtagtttaggtcaaagaatctt 5232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 4978 - 5052
Alignment:
Q  106 tgactacaagattctttcagttaggataagagttg--agtttgatcagtcgttttgaaatctttgaaatagttta 178  Q
    ||||| ||| ||||||| |||| || |||||||||  ||||||||||||||||||||||| |||||| |||||||    
T  4978 tgactccaatattctttaagttcgggtaagagttgtgagtttgatcagtcgttttgaaatatttgaattagttta 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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