View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10747_low_3 (Length: 265)
Name: NF10747_low_3
Description: NF10747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10747_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 3122162 - 3121926
Alignment:
| Q |
14 |
agaccaatactaaaagaataaaagtaggataaatgcagcaaacaagataagataatataaaacaataatttttaagcatagtcttacatcccagcaattg |
113 |
Q |
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| T |
3122162 |
agaccaatactaaaagaataaaagtaggataaatgcaccaaacaagataagataatataaaacagcaatttttaagcatagtcttacatcccagcaattg |
3122063 |
T |
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| Q |
114 |
tcataattaaacgataatagaaagataattgtagcaataaacacctaattagaactaaaa-agatgtagcaaagtactaataaatataacaatatcaaag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
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| T |
3122062 |
tcataattaaacgataatagaaagataattgtagcaataaacacctaattagaactaaaatggatgtagcaaagtactgataaatataacaatatcaaag |
3121963 |
T |
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| Q |
213 |
catggatcaaccaacccttcatttgctactgcaattt |
249 |
Q |
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| T |
3121962 |
catggatcaaccaacccttcatttgctactgcaattt |
3121926 |
T |
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