View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10748_low_8 (Length: 252)
Name: NF10748_low_8
Description: NF10748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10748_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 40519754 - 40519501
Alignment:
| Q |
5 |
gaggagcagagaatagtttgtagacaagattcttacatgaatagtaaagatcaatagaattagagccgcatggagtgtactatttgaagcttttgttttt |
104 |
Q |
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| T |
40519754 |
gaggagtagagaatagtttgtagacaagattcttacatgaatagtaaagatcaatagaattagagccgcatggagtgtactatttgaagcttttgttttt |
40519655 |
T |
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| Q |
105 |
ccataggttattttcacccaggttaatcatcatattctaaaacgcgtc--------atatgaacannnnnnnnnccgtaaacttaatctacatagaaaac |
196 |
Q |
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| T |
40519654 |
ccataggttattttcacccaggttaatcatcatattct-aaacgcgtcaacactaaatatgaacatttttttttccgtaaacttaatctacatagaaaac |
40519556 |
T |
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| Q |
197 |
cctaaacactgtacaaagccataaagcaacgcgaagaagaagcagggccatcccc |
251 |
Q |
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| T |
40519555 |
cctaaacactgtacaaaaccataaagcaacgcgaagaagaagcagggccatcccc |
40519501 |
T |
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