View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1074_low_1 (Length: 1023)
Name: NF1074_low_1
Description: NF1074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1074_low_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 754; Significance: 0; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 754; E-Value: 0
Query Start/End: Original strand, 208 - 1015
Target Start/End: Original strand, 1841577 - 1842381
Alignment:
| Q |
208 |
taacaatgttggcacatcctcttcatcttcatctccagcttttgtataagaaagattgttgtgttaccgttttgagttattttaagtataaaagcattta |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1841577 |
taacaatgttggcacatcctcttcatcttcatctccagcttttgtataagaaagattgttgtgttactgttttgagttattttaagtataaaagcattta |
1841676 |
T |
 |
| Q |
308 |
tgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaaaggtgtaaaagaagaatttcat |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1841677 |
tgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgcttccataacttggcattcaagcaaaggtgtaaaagaagaatttcat |
1841776 |
T |
 |
| Q |
408 |
gatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctaggg |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1841777 |
gatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctaggg |
1841876 |
T |
 |
| Q |
508 |
ttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattttaaaaaaccattgagcattggcttagcaga |
607 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |
|
|
| T |
1841877 |
ttgcatggtcggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattttaaaaaaacatcgagcattggcttagcgga |
1841976 |
T |
 |
| Q |
608 |
acttaaatgaccaatatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtgga |
707 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1841977 |
acttaaatgatcaatatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtgga |
1842076 |
T |
 |
| Q |
708 |
ttcactcatgaaggattttatgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagct |
807 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1842077 |
ttcactcatgaaggattttatgaccttgagtagaaattcaaactc---taatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagct |
1842173 |
T |
 |
| Q |
808 |
ggagggctaactgaattcaagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattggtataatataagaagatgttgaacttgcagc |
907 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1842174 |
ggagggctaactgaattcaagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattcgtataatataagaagatgttgaacttgcagc |
1842273 |
T |
 |
| Q |
908 |
cattgcatcaacacttacatcattggaaattcttgctgctaaaatgtggaggaaatatttatgagaaagagtttactaaaaataataaggttattagtgt |
1007 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1842274 |
cattgcatcaacacttacatcattggaaattcttgctgcaaaaatgtggaggaaatatgtatgagaaagagtttactaaaaataataaggttattagtgt |
1842373 |
T |
 |
| Q |
1008 |
tctgtggt |
1015 |
Q |
| |
|
|||||||| |
|
|
| T |
1842374 |
tctgtggt |
1842381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 269 - 601
Target Start/End: Complemental strand, 6465762 - 6465429
Alignment:
| Q |
269 |
tgttaccgttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccata |
368 |
Q |
| |
|
|||||| ||||||| | |||||||||||| ||| ||| ||| || ||||| ||||||||||||||||||| | ||||||||||||| ||||| || |
|
|
| T |
6465762 |
tgttactgttttgaatgattttaagtatagaagtattgatggtgatcttgttggtgttgttggtgattcatggttgttgaaaaccgatccggtttctgta |
6465663 |
T |
 |
| Q |
369 |
acttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaa |
468 |
Q |
| |
|
||||||||||| | || ||||| |||||||||| ||||||||| |||||||| | |||||||||| |||||||||||||||| || |||| |||| | | |
|
|
| T |
6465662 |
acttggcattctactaagggtgttaaagaagaatctcatgatgagattgtttccgttcttttgaaagatgttgaaggtttgaattcgtctgcaatagcga |
6465563 |
T |
 |
| Q |
469 |
gaaattcttcttacttttatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttag |
568 |
Q |
| |
|
||||| |||||||||||||| || | |||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
6465562 |
cgaattcgtcttacttttatggcaagttgattgctagggctgctaggttggctttgattgctgaagaggtttgtttccttgatgtgattccgaaaattag |
6465463 |
T |
 |
| Q |
569 |
aaagtattttaa-aaaaccattgagcattggctt |
601 |
Q |
| |
|
|||| ||| || |||| ||||||| ||||||| |
|
|
| T |
6465462 |
gaagtttttgaaggaaactattgagccttggctt |
6465429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 233 - 523
Target Start/End: Original strand, 1838732 - 1839020
Alignment:
| Q |
233 |
tcttcatctccagcttttgtataagaaagattgttgtgttaccgttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggt |
332 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||| | | | |||||||||||||| |||||||||||| || || ||||| |||| || ||||||| |
|
|
| T |
1838732 |
tcttcatcttcagcttttgtctaagaaagattgtaat-tcagtgttttgagttatttcaagtataaaagctttgatcgagagcctgtcggtgctgttggt |
1838830 |
T |
 |
| Q |
333 |
gattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttga |
432 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||||||| || ||||||| ||||||| | |||||||||||||||||||||| |||| |
|
|
| T |
1838831 |
-attcatggattttgaaaaccgatcatgtttctgtatcttggcattcaagaaattgtgtaaatgaagaatctaatgatgaaattgtttcagctctcttga |
1838929 |
T |
 |
| Q |
433 |
aatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctagggttgcatggttggcatt |
523 |
Q |
| |
|
|| |||||||| |||||||||| || ||||| | ||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| |
|
|
| T |
1838930 |
aagatgttgaataattgaactcatttgcaataatatcaaattcttcatacttttatggtaaattgattgccagggctgcaaggttggcatt |
1839020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 332 - 523
Target Start/End: Original strand, 1822092 - 1822280
Alignment:
| Q |
332 |
tgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttg |
431 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||| |
|
|
| T |
1822092 |
tgattcatggcttttgaaaatcgatcctgtttccgtaacttggcattcaagcaaaggtgttaaacaagaatctcatga---aattgtttcagctattttg |
1822188 |
T |
 |
| Q |
432 |
aaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctagggttgcatggttggcatt |
523 |
Q |
| |
|
||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||| ||||| |||| |||| |||||||||| |
|
|
| T |
1822189 |
aaagatgttgaaggtatgaactcatctgcaataacaacaaattcttcttacttttatagtaaattgattgccagggctgcaaggttggcatt |
1822280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 338 - 601
Target Start/End: Complemental strand, 6526732 - 6526468
Alignment:
| Q |
338 |
atggattttgaaaaccgatcatgtttccataacttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatat |
437 |
Q |
| |
|
||||||||||||||| |||| |||||| ||||||||||||||||||||||||| | ||| | ||| | |||||||||||||||||| |||| || || |
|
|
| T |
6526732 |
atggattttgaaaacagatcttgtttctgtaacttggcattcaagcaaaggtgtgagagatggattgcgtgatgaaattgtttcagcactttgtaaggat |
6526633 |
T |
 |
| Q |
438 |
gttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctagggttgcatggttggcattgatagctgaagagg |
537 |
Q |
| |
|
|||||||| |||| ||||| ||||| || ||| || ||||| |||||||| |||| ||||| || | |||| | | ||||||||||| ||||||| |
|
|
| T |
6526632 |
gttgaaggactgaattcatcaacaataaaaacaaaatcatcttatttttatggaaaattgattgcaagagctgcaagacttgcattgatagcggaagagg |
6526533 |
T |
 |
| Q |
538 |
tttgtttccttgatgtgattccaaaagttagaaagtattttaa-aaaaccattgagcattggctt |
601 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |
|
|
| T |
6526532 |
tttgtttccttgatgtgattccaaaagttagaaagtatttgaaggaaaccattgagccttggctt |
6526468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 169 - 442
Target Start/End: Original strand, 6472698 - 6472965
Alignment:
| Q |
169 |
gtgttgagtataagtttgagaagcaagtttcaggtgatttaacaatgttggcacatcctcttcatcttcatctccagcttttgtataagaaagattgttg |
268 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| ||||||||||| ||||||| ||| ||| | |||| |
|
|
| T |
6472698 |
gtgttgagtataagtttgagaagaaaggttcaggtgatttactgatgttagcacaccctcttcatct------ccagcttatgtctaaaagtgattccaa |
6472791 |
T |
 |
| Q |
269 |
tgttaccgttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccata |
368 |
Q |
| |
|
|| |||| ||||||| |||||||||||||||||||| ||| || ||||| |||||||||||||||||| |||||||||| |||| |||||| || |
|
|
| T |
6472792 |
tgctacctttttgagggattttaagtataaaagcattgatggtgaacttgttggagttgttggtgattcatggcttttgaaaacagatcctgtttctatt |
6472891 |
T |
 |
| Q |
369 |
acttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttga |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||| |
|
|
| T |
6472892 |
acttggcattcaagcaaaggtgtaaaagaagaatcacatgacgaaattgtttcagctctttcaaaagatgttga |
6472965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 286 - 467
Target Start/End: Original strand, 6515867 - 6516048
Alignment:
| Q |
286 |
attttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaa |
385 |
Q |
| |
|
|||| |||||| |||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
6515867 |
atttcaagtatcaaagcattgatggagaccttgttggtgttgttggtgattcatggattttgaaaaccgatccgatttctgtaacttggcattcaagcaa |
6515966 |
T |
 |
| Q |
386 |
aggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataaca |
467 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| | ||||| ||| ||||||||||||| || ||||| | ||||||| |
|
|
| T |
6515967 |
aggtataaaagaagaatcacatgatgaaattgtttcgtcgcttttaaaagatgttgaaggtttaaattcatcagcaataaca |
6516048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 277 - 538
Target Start/End: Original strand, 13035499 - 13035760
Alignment:
| Q |
277 |
ttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggca |
376 |
Q |
| |
|
|||| ||| ||| |||||||||||||||| ||| || ||||| |||||||||||||||||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
13035499 |
tttttagtgattataagtataaaagcattgatggtgaacttgttggagttgttggtgattcatggcttttgaaaaccgattctgtttctgtaacttggca |
13035598 |
T |
 |
| Q |
377 |
ttcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattct |
476 |
Q |
| |
|
| |||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||| | || ||||| ||||||| | || |
|
|
| T |
13035599 |
tacaagcaaaggtgtaaaagaagaatcacatgacaaaattgtttcagctctttcgaaagatgttgaaggtctaaagtcatcaccgataacaacgacatca |
13035698 |
T |
 |
| Q |
477 |
tcttacttttatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggt |
538 |
Q |
| |
|
|||||||||||||| |||| || || || | |||| |||| ||||||||| |||||||||| |
|
|
| T |
13035699 |
tcttacttttatggaaaattgatagcaagagctgcaaggttagcattgataactgaagaggt |
13035760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 622 - 826
Target Start/End: Complemental strand, 6526347 - 6526143
Alignment:
| Q |
622 |
tatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaagg |
721 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||| ||||||||||||||| ||||||| || ||||||| || |||||| |||| ||||| | |
|
|
| T |
6526347 |
tatcatttaggatactttctctatggaattgcagtgcttgctaagattgatcctatttggggtagaaagtataagtctcaagcctattctgtcatggctg |
6526248 |
T |
 |
| Q |
722 |
attttatgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagctggagggctaactga |
821 |
Q |
| |
|
||||||||| |||| |||||||||||| ||| | || ||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||| || |
|
|
| T |
6526247 |
attttatgaatctgagcagaaattcaaaccctagttattacacgcatctaaggtgtttcgatctgtataaattacactcttgggctggagggctaacaga |
6526148 |
T |
 |
| Q |
822 |
attca |
826 |
Q |
| |
|
||||| |
|
|
| T |
6526147 |
attca |
6526143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 286 - 459
Target Start/End: Complemental strand, 6505895 - 6505722
Alignment:
| Q |
286 |
attttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaa |
385 |
Q |
| |
|
|||| ||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||||||| || | ||||||||| |||||||| |||||||| |
|
|
| T |
6505895 |
atttcaagtatacaagcattgatggtgaccttgttggtgttgttggtgattcatggattttgaaaacagaacctgtttccatgacttggcactcaagcaa |
6505796 |
T |
 |
| Q |
386 |
aggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctg |
459 |
Q |
| |
|
|||||||||||| |||| | |||||||||||||| | |||| ||| ||||||||||||| |||||||||| |
|
|
| T |
6505795 |
aggtgtaaaagacgaatcacgcaatgaaattgtttcatcactttctaaagatgttgaaggtttaaactcatctg |
6505722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 622 - 752
Target Start/End: Original strand, 1831992 - 1832122
Alignment:
| Q |
622 |
tatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaagg |
721 |
Q |
| |
|
||||||||| | |||||||||| |||||||||| ||| ||| ||||||||||||||||||| || | ||||| || |||||| |||||||||| ||| |
|
|
| T |
1831992 |
tatcatttaggatactttctctttggaattgcagtgcttgcaaagattgatccaatttggggtagagagtataagcctcaagcctattcactcattgagg |
1832091 |
T |
 |
| Q |
722 |
attttatgaccttgagtagaaattcaaactc |
752 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
1832092 |
attttatgaccttgagtagaaattcaaactc |
1832122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 825 - 956
Target Start/End: Original strand, 6473462 - 6473593
Alignment:
| Q |
825 |
caagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattggtataatataagaagatgttgaacttgcagccattgcatcaacactta |
924 |
Q |
| |
|
|||||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||| ||| | |||| ||||| |||| | |||||| ||||||| |
|
|
| T |
6473462 |
caagagagtactagtgaagccgtgaatgcatactattctgcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacactta |
6473561 |
T |
 |
| Q |
925 |
catcattggaaattcttgctgctaaaatgtgg |
956 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
6473562 |
catcattggaaattcttgctgctaaaatgtgg |
6473593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 728 - 956
Target Start/End: Original strand, 1828190 - 1828440
Alignment:
| Q |
728 |
tgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagctggagggctaactgaat---- |
823 |
Q |
| |
|
|||||||||||||||| || ||| |||||| |||||||||| |||||||||||||||| ||||||||||||||| || ||||||||||| |||| |
|
|
| T |
1828190 |
tgaccttgagtagaaactctaac---aataattacacgtgtctgaggtgtttcgatctttataaattacactcttgggccggagggctaacagaattcgc |
1828286 |
T |
 |
| Q |
824 |
------------tcaagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattgg---------tataatataagaagatgttgaactt |
902 |
Q |
| |
|
||||||||||||||| || | ||||||||||||||||| |||||||||||||| ||| |||| ||||||| ||| | |
|
|
| T |
1828287 |
tgatggtagaaatcaagagagcactagtgatgcagtgaatgcatactattccgcagccttgattggtatggttactatggtatatgaagatgcggaattc |
1828386 |
T |
 |
| Q |
903 |
gcagccattgcatcaacacttacatcattggaaattcttgctgctaaaatgtgg |
956 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
1828387 |
gcagccgttgcatcaacacttgcgtcattggaagttcttgctgctaaaatgtgg |
1828440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 277 - 567
Target Start/End: Original strand, 6520324 - 6520614
Alignment:
| Q |
277 |
ttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggca |
376 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||| ||| ||||| ||| |||||||||||||| |||||||||| |||| |||||| |||||||||| |
|
|
| T |
6520324 |
ttttgagtgattttaagtataaaagcattgatggagaccttgttggtgtcattggtgattcatggtttttgaaaactgatcctgtttctgtaacttggca |
6520423 |
T |
 |
| Q |
377 |
ttcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattct |
476 |
Q |
| |
|
||| || ||||| || |||||| ||| | |||||||||||||| ||||||||| ||||||| | | | || ||||| || ||| ||| || || |
|
|
| T |
6520424 |
ttcttcaaatggtgttaagaaagaataccataaagaaattgtttcagcacttttgaaagatgttgaggatctaaattcatcagatatatcaacaacatcg |
6520523 |
T |
 |
| Q |
477 |
tcttacttttatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagtta |
567 |
Q |
| |
|
||||| | |||||| || | |||||||| | |||| |||| ||| | |||||||||||||||| || ||||| |||||||||| |||| |
|
|
| T |
6520524 |
tcttattcttatggaaagttgattgctagagctgcaaggttagcaataatagctgaagaggttttcgtctttgatttgattccaaaggtta |
6520614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 622 - 821
Target Start/End: Complemental strand, 6465308 - 6465112
Alignment:
| Q |
622 |
tatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaagg |
721 |
Q |
| |
|
||||||||| | |||||||||||||||||||| ||| ||| ||||||||||||||||||| || |||||| || |||||| ||||||||||| | |
|
|
| T |
6465308 |
tatcatttaggatactttctctatggaattgctgtgcttgcaaagattgatccaatttggggtaggaagtataagcctcaagcttattcactcatggctg |
6465209 |
T |
 |
| Q |
722 |
attttatgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagctggagggctaactga |
821 |
Q |
| |
|
||||||||| |||||| |||||| | ||||| ||| |||| ||||||||||||||||||||| |||||| || || || || |||||| ||||||| |
|
|
| T |
6465208 |
attttatgaacttgagcagaaatccgaactc---gaattacacccgtctaaggtgtttcgatctttttaaattgcattcgtgggccggagggttaactga |
6465112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 286 - 598
Target Start/End: Original strand, 6461587 - 6461900
Alignment:
| Q |
286 |
attttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaa |
385 |
Q |
| |
|
||||||||||| |||||||| ||| ||| ||||| ||||||||||||||||||| ||||| |||| |||| |||| | || |||| ||||| || |
|
|
| T |
6461587 |
attttaagtatcaaagcattgatggagaccttgttggtgttgttggtgattcatggcttttggaaactgatcctgttgatgttacatggctttcaacgaa |
6461686 |
T |
 |
| Q |
386 |
aggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttt |
485 |
Q |
| |
|
||||| || |||||| || ||||||||| |||||| | ||||| ||| ||||||| ||| | | ||||| ||||||| | ||| |||||||| | |
|
|
| T |
6461687 |
tggtgtgaagaaagaatctcgtgatgaaatcgtttcatcacttttaaaagatgttgagggtctagattcatcaaaaataaccacaaaagattcttactct |
6461786 |
T |
 |
| Q |
486 |
tatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattttaaa-aaa |
584 |
Q |
| |
|
|||||||||| |||| |||| || |||| |||||||||||||||||||||| || | | |||||||||||||| |||| |||| ||| ||| ||| |
|
|
| T |
6461787 |
tatggtaaattgattggaagggcggcgaggtttgcattgatagctgaagaggtttcttacttagatgtgattccaaaggttaagaagtttttaaaagaaa |
6461886 |
T |
 |
| Q |
585 |
ccattgagcattgg |
598 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
6461887 |
ccattgagccttgg |
6461900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 622 - 737
Target Start/End: Original strand, 6473246 - 6473361
Alignment:
| Q |
622 |
tatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaagg |
721 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||| || || ||| || |||||| || |||||||| | | |
|
|
| T |
6473246 |
tatcatttaggttactttctctatggaattgcagtgcttgctaagattgatccagtttggggtaagaaatataagcctcaagcctatgcactcatggaag |
6473345 |
T |
 |
| Q |
722 |
attttatgaccttgag |
737 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
6473346 |
attttatgaccttgag |
6473361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 722 - 818
Target Start/End: Original strand, 1839191 - 1839284
Alignment:
| Q |
722 |
attttatgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagctggagggctaac |
818 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| | || ||||||||||||||| ||||||| ||||||||||||||| || ||||||||||| |
|
|
| T |
1839191 |
attttatgacctcaagtagaaattcgaactctaatta---catgtgtctaaggtgtttagatctttataaattacactcttgggccggagggctaac |
1839284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 508 - 601
Target Start/End: Complemental strand, 6523583 - 6523489
Alignment:
| Q |
508 |
ttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattttaaa-aaaccattgagcattggctt |
601 |
Q |
| |
|
||||| ||||||| | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| | | |||||||| ||||||| |
|
|
| T |
6523583 |
ttgcaaggttggcttcaatagctgaagaggtttgtttccttgatgtgatttcaaaagttaaaaagtatttgaaagagatcattgagccttggctt |
6523489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 634 - 755
Target Start/End: Original strand, 1827222 - 1827343
Alignment:
| Q |
634 |
tactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaaggattttatgacct |
733 |
Q |
| |
|
|||||||||||| |||||||| ||| ||| ||||||||| ||||||||| || ||| ||| || |||||| |||||||||| ||||||||||||| |
|
|
| T |
1827222 |
tactttctctatcgaattgcagtgcttgcaaagattgattcaatttggggtagaaaatataagcctcaagcctattcactcattgccgattttatgacct |
1827321 |
T |
 |
| Q |
734 |
tgagtagaaattcaaactctaa |
755 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
1827322 |
cgagtagaaattcgaactctaa |
1827343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 451
Target Start/End: Complemental strand, 6528768 - 6528446
Alignment:
| Q |
127 |
tgttaccctgtgtcaggtgttgctatatttggagaaccattt-gtgttgagtataagtttgagaagcaagtttcaggtgatttaacaatgttggcacatc |
225 |
Q |
| |
|
||||| ||||||||||||| ||||||| | ||||||||||| ||||||||||||| | |||||| | | || |||||||| ||||| ||||| | |
|
|
| T |
6528768 |
tgttatcctgtgtcaggtgatgctatactcagagaaccattttgtgttgagtataaatgggagaagaagggttggggtgatttgttgatgttagcacacc |
6528669 |
T |
 |
| Q |
226 |
ctcttcatcttcatctccagcttttgtataagaaagattgttg---tgttaccgttttgagttattttaagtataaaagcatttatgcagagcttgtcaa |
322 |
Q |
| |
|
||||||||||||| |||||| | | ||||||||||| | |||| ||||||||| |||| ||||||||||||||| ||| || ||||| |
|
|
| T |
6528668 |
ctcttcatcttca------gcttttatctgagaaagattgtaagaatattactgttttgagtgatttcaagtataaaagcattgatggcgatcttgttgg |
6528575 |
T |
 |
| Q |
323 |
tgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttca |
422 |
Q |
| |
|
|||||| |||||| |||||||||||||| ||||||||||| || |||||| |||| | || ||||| |||||| || ||||| ||||||||||| |
|
|
| T |
6528574 |
cattgttgctgattcgtggattttgaaaactgatcatgtttctattacttggtattccacaaagggtgtgaaagaaaaacactatgatcaaattgtttca |
6528475 |
T |
 |
| Q |
423 |
gctcttttgaaatatgttgaaggtttgaa |
451 |
Q |
| |
|
| ||||| | |||||||||||||||| |
|
|
| T |
6528474 |
tcactttttacggatgttgaaggtttgaa |
6528446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 910 - 955
Target Start/End: Original strand, 1822452 - 1822497
Alignment:
| Q |
910 |
ttgcatcaacacttacatcattggaaattcttgctgctaaaatgtg |
955 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1822452 |
ttgcatcaacacttacatcattggaaattctttctgctaaaatgtg |
1822497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 6526810 - 6526733
Alignment:
| Q |
237 |
catctccagcttttgtataagaaagattgttgtgttaccgttttgagttattttaagtataaaagcatttatgcagag |
314 |
Q |
| |
|
||||| |||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| ||||| ||| |||| |
|
|
| T |
6526810 |
catctgcagcttttgtctaagaaagattgtaatgttactgttttgagtgattttaagtataaacgcattgatggagag |
6526733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 427 - 507
Target Start/End: Original strand, 1832542 - 1832622
Alignment:
| Q |
427 |
ttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttttatggtaaatctattgctaggg |
507 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||| | ||||| ||||||||| |||||| |||||||||| |
|
|
| T |
1832542 |
ttttgaaagatgttgaaggtttgaactcatctgcaataacaactatatcttcatacttttatcgtaaataaattgctaggg |
1832622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 622 - 817
Target Start/End: Complemental strand, 6457348 - 6457156
Alignment:
| Q |
622 |
tatcatttaagttactttctctatggaattgcattgcatgctaagattgatccaatttgggatacaaagtatgagactcaagtggattcactcatgaagg |
721 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||| ||| |||||||||||| ||||| | ||||||| | |||||| ||||||||||| | |
|
|
| T |
6457348 |
tatcatttaggatactttctctatggaattgcagtgcttgcaaagattgatccagcttggggaagaaagtataaacctcaagcttattcactcatggcag |
6457249 |
T |
 |
| Q |
722 |
attttatgaccttgagtagaaattcaaactctaataatgacacgtgtctaaggtgtttcgatctttgtaaattacactcttgagctggagggctaa |
817 |
Q |
| |
|
|||| ||| ||| | ||||| |||||||| ||| || |||| || |||||||||||||||||| |||||| || ||||| |||||||| |||| |
|
|
| T |
6457248 |
atttcctgaacttaggaagaaaatcaaactcaaattat-acac--gtttaaggtgtttcgatctttataaatttcattcttgggctggaggactaa |
6457156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 286 - 598
Target Start/End: Complemental strand, 6497085 - 6496772
Alignment:
| Q |
286 |
attttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaa |
385 |
Q |
| |
|
||||||||||| |||||||| ||| ||| ||||| ||||||||||||||||||| ||||| |||| |||| ||||| | || |||| ||||| ||| |
|
|
| T |
6497085 |
attttaagtatcaaagcattgatggagaccttgttggtgttgttggtgattcatggcttttggaaactgatcctgtttatgttacatggctttcaaccaa |
6496986 |
T |
 |
| Q |
386 |
aggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataacaagaaattcttcttacttt |
485 |
Q |
| |
|
||||| || |||||| || ||||||||| |||||| | ||| | ||| |||||| || | | |||| ||||||||| || |||||||| | |
|
|
| T |
6496985 |
tggtgtgaagaaagaatctcgtgatgaaatcgtttcatcacttgtaaaagatgttggcagtctagattcattgaaaataacaacgaaggattcttactct |
6496886 |
T |
 |
| Q |
486 |
tatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattttaaa-aaa |
584 |
Q |
| |
|
|||||||||| |||| |||| || |||| ||||||||||| |||||||||| | | | |||||||||||||| |||| |||| ||| ||| ||| |
|
|
| T |
6496885 |
tatggtaaattgattggaagggcggcgaggtttgcattgatagccgaagaggtttcatacttagatgtgattccaaaggttaagaagtttttgaaagaaa |
6496786 |
T |
 |
| Q |
585 |
ccattgagcattgg |
598 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
6496785 |
ccattgagccttgg |
6496772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 6506018 - 6505937
Alignment:
| Q |
158 |
gagaaccattt-gtgttgagtataagtttgagaagcaagtttcaggtgatttaacaatgttggcacatcctcttcatcttca |
238 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| | |||||||||||||| | | || ||||| |||||||||||||| |
|
|
| T |
6506018 |
gagaaccattttgtgttgagtataagtttgagaagaatgtttcaggtgatttgttattattagcacaccctcttcatcttca |
6505937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 897 - 956
Target Start/End: Complemental strand, 6526058 - 6525999
Alignment:
| Q |
897 |
gaacttgcagccattgcatcaacacttacatcattggaaattcttgctgctaaaatgtgg |
956 |
Q |
| |
|
||||| ||||| | |||||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
6526058 |
gaactcgcagcgactgcatcgacacttgcatcatttgaaattcttgctgctaaaatgtgg |
6525999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 784 - 826
Target Start/End: Original strand, 1827355 - 1827397
Alignment:
| Q |
784 |
ctttgtaaattacactcttgagctggagggctaactgaattca |
826 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
1827355 |
ctttgtaaactacactcttgggctggagggctaactgaattca |
1827397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 824 - 908
Target Start/End: Original strand, 1827411 - 1827495
Alignment:
| Q |
824 |
tcaagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattggtataatataagaagatgttgaacttgcagcc |
908 |
Q |
| |
|
|||||||||| |||| |||| |||||||||| |||||||||||||||||| ||| |||| ||||||| |||||| |||||| |
|
|
| T |
1827411 |
tcaagagagcgctagtgaagcaatgaatgcatattattctgcagccttgattactatggtatatgaagatgctgaactcgcagcc |
1827495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 967 - 1007
Target Start/End: Original strand, 1846961 - 1847001
Alignment:
| Q |
967 |
tatgagaaagagtttactaaaaataataaggttattagtgt |
1007 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
1846961 |
tatgagaaagtgtttactaacaataataaggttattagtgt |
1847001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 6515753 - 6515825
Alignment:
| Q |
166 |
tttgtgttgagtataagtttgagaagcaagtttcaggtgatttaacaatgttggcacatcctcttcatcttca |
238 |
Q |
| |
|
||||| |||||||||||||||||||| ||| |||||||||||| | |||| ||||| ||||||||| |||| |
|
|
| T |
6515753 |
tttgtcttgagtataagtttgagaagaaaggttcaggtgatttgttattgttagcacaccctcttcatattca |
6515825 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 429
Target Start/End: Complemental strand, 6457788 - 6457645
Alignment:
| Q |
286 |
attttaagtataaaagcatttatgcagagcttgtcaatgttgttggtgattcatggattttgaaaaccgatcatgtttccataacttggcattcaagcaa |
385 |
Q |
| |
|
|||| |||||| |||||||| | | |||||||| ||||||||| || |||||| | |||||||| ||| |||||| | || |||||||| | ||| |
|
|
| T |
6457788 |
atttgaagtatcaaagcattgacggcgagcttgttggtgttgttggagactcatggttattgaaaactcatcctgtttctgttacatggcattccaccaa |
6457689 |
T |
 |
| Q |
386 |
aggtgtaaaagaagaatttcatgatgaaattgtttcagctcttt |
429 |
Q |
| |
|
|||| | || ||||||||||||||||||||| |||||| |||| |
|
|
| T |
6457688 |
aggtatcaatgaagaatttcatgatgaaatttgttcagcacttt |
6457645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 824 - 942
Target Start/End: Original strand, 6516525 - 6516643
Alignment:
| Q |
824 |
tcaagagagcactagcgaagtcgtgaatgcatactattctgcagccttgattggtataatataagaagatgttgaacttgcagccattgcatcaacactt |
923 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||||| |||||||||| || || || ||| | ||| | |||||| | |||||||||||||| |
|
|
| T |
6516525 |
tcaagagagtactagtgaagctgtgaatgcatactatgctgcagccttaatgggaatggcatatggtgatcctcaacttgtgtcaattgcatcaacacta |
6516624 |
T |
 |
| Q |
924 |
acatcattggaaattcttg |
942 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6516625 |
acatcattggaaattcttg |
6516643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 955 - 988
Target Start/End: Original strand, 1828456 - 1828489
Alignment:
| Q |
955 |
ggaggaaatatttatgagaaagagtttactaaaa |
988 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
1828456 |
ggaggaaatatgtatgagaaagagtttactaaaa |
1828489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 7e-27; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 269 - 601
Target Start/End: Original strand, 35231188 - 35231515
Alignment:
| Q |
269 |
tgttaccgttttgagttattttaagtataaaagcatttatgcagagcttgtcaatgttgttggt---gattcatggattttgaaaaccgatcatgtttcc |
365 |
Q |
| |
|
|||||| ||||||| | |||||||||||||||||||| || || ||||| |||||||||| ||| ||||| ||||||||||| || ||||| |
|
|
| T |
35231188 |
tgttactgttttgaatgattttaagtataaaagcattgatagtgaacttgttggtgttgttggttgtgatccatggcttttgaaaaccaattctgttttt |
35231287 |
T |
 |
| Q |
366 |
ataacttggcattcaagcaaaggtgtaaaagaagaatttcatgatgaaattgtttcagctcttttgaaatatgttgaaggtttgaactcatctgaaataa |
465 |
Q |
| |
|
|||||||||| | | || ||||| ||||||||||| ||| ||||||||||||| | || |||||| ||||||| || | || ||||||| |||| |
|
|
| T |
35231288 |
gtaacttggcactttataaatggtgttaaagaagaattacattatgaaattgtttcggttcctttgaatgatgttgagggactaaattcatctgcgataa |
35231387 |
T |
 |
| Q |
466 |
caagaaattcttcttacttttatggtaaatctattgctagggttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagt |
565 |
Q |
| |
|
|||| | ||| ||||| |||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35231388 |
caaggacttcatcttatttttatggaaaattgattgcaagg---------ttggctttgatagctgaagaggtttgtttccttgatgtgattccaaaagt |
35231478 |
T |
 |
| Q |
566 |
tagaaagtattttaaa-aaaccattgagcattggctt |
601 |
Q |
| |
|
|| |||||||| ||| | | |||||||| ||||||| |
|
|
| T |
35231479 |
taagaagtatttgaaagagatcattgagccttggctt |
35231515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 508 - 577
Target Start/End: Original strand, 35243061 - 35243130
Alignment:
| Q |
508 |
ttgcatggttggcattgatagctgaagaggtttgtttccttgatgtgattccaaaagttagaaagtattt |
577 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
35243061 |
ttgcatagttggctttgatagctgaagaggtttgtttctttgatgtgattccaaaagttaagaagtattt |
35243130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 907 - 956
Target Start/End: Original strand, 35244497 - 35244546
Alignment:
| Q |
907 |
ccattgcatcaacacttacatcattggaaattcttgctgctaaaatgtgg |
956 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| |||||||||| ||||| |
|
|
| T |
35244497 |
ccattggatcaacacttgcatcattggaaatttgtgctgctaaattgtgg |
35244546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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