View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1074_low_33 (Length: 312)
Name: NF1074_low_33
Description: NF1074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1074_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 6 - 284
Target Start/End: Complemental strand, 32846132 - 32845854
Alignment:
| Q |
6 |
ctccaagaatatgttaaactaatttagaacaaagtctgaatgaaatcaatggtaaaaataaaggtgttacagtgcaaatatttcttaatttcaaatgaac |
105 |
Q |
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|||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32846132 |
ctccaaaaacatgttaaactaatttagaacaaagtctgagtgaaatcaatggtaaaaataaaggtgttacagtgcaaatatttcttaatttcaaatgaac |
32846033 |
T |
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| Q |
106 |
ttaaaaaagaacacaacttacaactgcaacctccagatcttccaccaccatccctttcaggtaaccactgattaatcagggtttttgatttgagattttg |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32846032 |
ttaaaaaagaacacaacttacaactgcaacctccagatctgccaccaccatccctttcaggtaaccactgattaattagggtttttgatttgagattttg |
32845933 |
T |
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| Q |
206 |
agtatgaagtttctcaactcactgtatggtttttgatttggggaacatacaaaagagattaacagattatttcatctgt |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32845932 |
agtatgaagtttctcaactcactgtatggtttttgatttggggaacatacaaaaaagattaacagattatttcatctgt |
32845854 |
T |
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