View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10750_low_5 (Length: 285)

Name: NF10750_low_5
Description: NF10750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10750_low_5
NF10750_low_5
[»] scaffold0057 (1 HSPs)
scaffold0057 (65-285)||(69811-70032)
[»] scaffold0138 (2 HSPs)
scaffold0138 (62-285)||(20967-21191)
scaffold0138 (74-285)||(33994-34206)
[»] scaffold0515 (1 HSPs)
scaffold0515 (77-285)||(4914-5123)
[»] scaffold0306 (1 HSPs)
scaffold0306 (77-285)||(4914-5123)
[»] chr5 (29 HSPs)
chr5 (62-270)||(17011598-17011806)
chr5 (62-285)||(29448710-29448934)
chr5 (62-244)||(265908-266090)
chr5 (138-272)||(31456908-31457040)
chr5 (177-285)||(10774622-10774730)
chr5 (207-285)||(30616629-30616708)
chr5 (211-272)||(21556921-21556982)
chr5 (159-245)||(20469175-20469261)
chr5 (159-245)||(21617927-21618013)
chr5 (191-245)||(6551289-6551343)
chr5 (206-272)||(21554275-21554341)
chr5 (192-245)||(20566546-20566599)
chr5 (177-285)||(26832608-26832715)
chr5 (207-244)||(36508633-36508670)
chr5 (169-245)||(25249827-25249903)
chr5 (169-245)||(25313611-25313687)
chr5 (62-127)||(17875927-17875993)
chr5 (192-245)||(21300043-21300096)
chr5 (62-118)||(21504009-21504065)
chr5 (239-285)||(22240877-22240924)
chr5 (239-285)||(22241873-22241920)
chr5 (239-285)||(22242869-22242916)
chr5 (239-285)||(22243865-22243912)
chr5 (138-272)||(17876151-17876283)
chr5 (136-230)||(19921584-19921676)
chr5 (62-127)||(31456721-31456787)
chr5 (192-240)||(7485002-7485050)
chr5 (116-164)||(20313200-20313248)
chr5 (141-245)||(21405627-21405730)
[»] chr1 (28 HSPs)
chr1 (62-274)||(50001346-50001558)
chr1 (62-285)||(46197703-46197927)
chr1 (62-272)||(29763604-29763814)
chr1 (207-285)||(12327701-12327780)
chr1 (207-272)||(51336494-51336559)
chr1 (159-245)||(13302869-13302955)
chr1 (159-245)||(4595852-4595938)
chr1 (153-245)||(42697745-42697837)
chr1 (224-285)||(21995622-21995684)
chr1 (217-285)||(24007183-24007252)
chr1 (192-245)||(42913049-42913102)
chr1 (158-245)||(45755486-45755573)
chr1 (179-245)||(24723350-24723415)
chr1 (192-244)||(19676711-19676763)
chr1 (192-244)||(21046049-21046101)
chr1 (207-245)||(7051921-7051959)
chr1 (192-258)||(16058300-16058366)
chr1 (62-127)||(44822246-44822312)
chr1 (207-245)||(51324519-51324557)
chr1 (61-127)||(21188149-21188216)
chr1 (169-244)||(21708127-21708201)
chr1 (169-244)||(21712670-21712744)
chr1 (207-245)||(21239048-21239086)
chr1 (159-245)||(22350684-22350769)
chr1 (214-255)||(17901783-17901824)
chr1 (192-244)||(20633631-20633683)
chr1 (74-129)||(34392648-34392704)
chr1 (169-261)||(41373348-41373439)
[»] chr2 (41 HSPs)
chr2 (62-272)||(21080941-21081151)
chr2 (62-285)||(21915494-21915718)
chr2 (62-272)||(25184059-25184269)
chr2 (62-236)||(18357975-18358149)
chr2 (207-285)||(357896-357975)
chr2 (169-245)||(14694303-14694379)
chr2 (160-258)||(22501939-22502037)
chr2 (160-258)||(22509873-22509971)
chr2 (192-285)||(40912320-40912414)
chr2 (159-245)||(25142171-25142257)
chr2 (169-245)||(27852645-27852721)
chr2 (219-285)||(27484447-27484514)
chr2 (224-272)||(34858164-34858212)
chr2 (224-272)||(34873226-34873274)
chr2 (226-272)||(34491212-34491258)
chr2 (160-245)||(3539805-3539890)
chr2 (169-245)||(24516164-24516239)
chr2 (192-258)||(17307486-17307552)
chr2 (169-243)||(23068408-23068482)
chr2 (62-127)||(24884231-24884297)
chr2 (192-245)||(19201199-19201252)
chr2 (138-242)||(1383545-1383647)
chr2 (192-244)||(5031129-5031181)
chr2 (62-129)||(12626546-12626614)
chr2 (62-129)||(19647104-19647172)
chr2 (192-244)||(24780840-24780892)
chr2 (153-245)||(25046079-25046171)
chr2 (169-244)||(2523747-2523821)
chr2 (179-229)||(18390229-18390279)
chr2 (207-245)||(44072572-44072610)
chr2 (62-127)||(45535796-45535862)
chr2 (169-245)||(5986154-5986230)
chr2 (192-244)||(9975929-9975981)
chr2 (192-244)||(22251448-22251500)
chr2 (116-164)||(36734530-36734578)
chr2 (62-118)||(45535666-45535722)
chr2 (239-272)||(18240824-18240857)
chr2 (221-285)||(29602117-29602182)
chr2 (192-244)||(24436648-24436700)
chr2 (62-90)||(31345991-31346019)
chr2 (192-240)||(37270699-37270747)
[»] chr6 (30 HSPs)
chr6 (62-285)||(15900612-15900836)
chr6 (74-285)||(15173411-15173623)
chr6 (62-184)||(15891629-15891751)
chr6 (169-272)||(27329953-27330055)
chr6 (169-272)||(27390693-27390795)
chr6 (224-285)||(20733202-20733264)
chr6 (177-285)||(27852193-27852300)
chr6 (169-245)||(18928658-18928734)
chr6 (169-244)||(19655231-19655305)
chr6 (177-244)||(27572122-27572188)
chr6 (225-272)||(28103420-28103467)
chr6 (159-245)||(15890711-15890796)
chr6 (191-245)||(15998888-15998942)
chr6 (160-245)||(23501641-23501725)
chr6 (207-245)||(28948590-28948628)
chr6 (159-245)||(31731903-31731989)
chr6 (207-244)||(27125477-27125514)
chr6 (192-244)||(7827972-7828024)
chr6 (177-245)||(12041619-12041687)
chr6 (192-244)||(23150287-23150339)
chr6 (192-243)||(24267849-24267900)
chr6 (169-243)||(19772667-19772741)
chr6 (159-244)||(19401062-19401146)
chr6 (192-244)||(18703568-18703620)
chr6 (192-244)||(18709503-18709555)
chr6 (62-127)||(18585549-18585615)
chr6 (207-241)||(18585820-18585854)
chr6 (169-243)||(22806716-22806790)
chr6 (214-255)||(29045293-29045334)
chr6 (214-258)||(19825472-19825516)
[»] scaffold0034 (2 HSPs)
scaffold0034 (62-285)||(29174-29398)
scaffold0034 (169-243)||(120931-121005)
[»] chr8 (41 HSPs)
chr8 (62-285)||(23478952-23479176)
chr8 (62-285)||(16198706-16198930)
chr8 (62-285)||(19880693-19880916)
chr8 (62-285)||(26454576-26454802)
chr8 (105-271)||(17158936-17159102)
chr8 (62-245)||(25657513-25657696)
chr8 (160-245)||(36727037-36727122)
chr8 (169-245)||(45469218-45469294)
chr8 (159-258)||(20022026-20022125)
chr8 (214-272)||(12577901-12577959)
chr8 (214-285)||(41680091-41680163)
chr8 (170-245)||(23899986-23900061)
chr8 (192-244)||(20083638-20083690)
chr8 (62-129)||(20879343-20879411)
chr8 (169-245)||(22254743-22254819)
chr8 (191-245)||(4380616-4380670)
chr8 (232-270)||(22237024-22237062)
chr8 (159-245)||(31722492-31722578)
chr8 (191-244)||(18761447-18761500)
chr8 (169-245)||(17906848-17906923)
chr8 (207-245)||(5761548-5761586)
chr8 (207-245)||(22532131-22532169)
chr8 (207-245)||(22536816-22536854)
chr8 (192-245)||(6101752-6101805)
chr8 (207-240)||(6573060-6573093)
chr8 (191-244)||(17218701-17218754)
chr8 (192-245)||(20397509-20397562)
chr8 (192-240)||(6202776-6202824)
chr8 (153-245)||(19700122-19700214)
chr8 (62-118)||(21676717-21676773)
chr8 (62-118)||(22483650-22483706)
chr8 (177-245)||(23889785-23889852)
chr8 (192-244)||(42817907-42817959)
chr8 (178-245)||(23419427-23419494)
chr8 (179-245)||(22317910-22317975)
chr8 (159-245)||(23948230-23948316)
chr8 (207-244)||(39936007-39936044)
chr8 (192-244)||(19140765-19140816)
chr8 (74-129)||(22610380-22610436)
chr8 (214-258)||(36306019-36306063)
chr8 (192-240)||(37292705-37292753)
[»] chr3 (48 HSPs)
chr3 (62-269)||(16979782-16979989)
chr3 (62-244)||(22652643-22652825)
chr3 (194-272)||(36528869-36528947)
chr3 (198-272)||(3263935-3264009)
chr3 (192-285)||(24177694-24177788)
chr3 (207-272)||(15446840-15446905)
chr3 (169-245)||(33565064-33565140)
chr3 (62-129)||(13522463-13522530)
chr3 (177-272)||(52988830-52988923)
chr3 (224-285)||(37641462-37641524)
chr3 (138-245)||(13185842-13185948)
chr3 (169-243)||(22758835-22758909)
chr3 (224-270)||(52465345-52465391)
chr3 (171-244)||(11259411-11259483)
chr3 (211-272)||(14967203-14967264)
chr3 (169-241)||(11885560-11885632)
chr3 (169-245)||(35960927-35961003)
chr3 (159-258)||(11563692-11563791)
chr3 (192-241)||(14508847-14508896)
chr3 (231-272)||(31223824-31223865)
chr3 (192-245)||(40807996-40808049)
chr3 (192-245)||(44274418-44274471)
chr3 (192-244)||(17044966-17045018)
chr3 (192-244)||(17047126-17047178)
chr3 (192-244)||(17539106-17539158)
chr3 (192-244)||(17541434-17541486)
chr3 (192-244)||(22306583-22306635)
chr3 (116-164)||(25202059-25202107)
chr3 (62-129)||(45803451-45803519)
chr3 (62-129)||(48631202-48631270)
chr3 (169-240)||(17694045-17694115)
chr3 (207-245)||(5200242-5200280)
chr3 (207-245)||(9510915-9510953)
chr3 (207-245)||(9518890-9518928)
chr3 (191-245)||(15566743-15566797)
chr3 (207-245)||(16050942-16050980)
chr3 (192-258)||(17518859-17518925)
chr3 (192-258)||(17533721-17533787)
chr3 (169-243)||(18699431-18699505)
chr3 (207-245)||(19568207-19568245)
chr3 (207-245)||(40812848-40812886)
chr3 (159-245)||(42323970-42324056)
chr3 (192-258)||(49900730-49900796)
chr3 (207-244)||(15931508-15931545)
chr3 (116-164)||(48043557-48043605)
chr3 (169-244)||(45577655-45577729)
chr3 (116-149)||(21845745-21845778)
chr3 (192-240)||(10311527-10311575)
[»] scaffold0436 (1 HSPs)
scaffold0436 (62-272)||(8830-9040)
[»] chr7 (48 HSPs)
chr7 (62-272)||(29052154-29052364)
chr7 (62-285)||(16549963-16550184)
chr7 (62-285)||(16615478-16615699)
chr7 (62-245)||(32160199-32160382)
chr7 (158-245)||(14218894-14218981)
chr7 (138-245)||(35771440-35771546)
chr7 (159-272)||(30820123-30820234)
chr7 (159-245)||(4071787-4071873)
chr7 (224-285)||(19485931-19485993)
chr7 (153-245)||(15289066-15289158)
chr7 (192-258)||(13147458-13147524)
chr7 (179-245)||(48807324-48807390)
chr7 (169-258)||(12127149-12127237)
chr7 (192-244)||(11067468-11067520)
chr7 (192-244)||(32433589-32433641)
chr7 (232-272)||(46579731-46579771)
chr7 (179-245)||(12754611-12754676)
chr7 (191-245)||(18955329-18955383)
chr7 (192-258)||(44374843-44374909)
chr7 (192-258)||(44383708-44383774)
chr7 (207-245)||(47974819-47974857)
chr7 (141-246)||(11054663-11054767)
chr7 (179-244)||(16078317-16078382)
chr7 (192-245)||(20586352-20586405)
chr7 (159-272)||(36685118-36685229)
chr7 (192-244)||(8851159-8851211)
chr7 (192-244)||(12372274-12372326)
chr7 (192-244)||(12465260-12465312)
chr7 (171-243)||(14928290-14928362)
chr7 (171-243)||(15351756-15351828)
chr7 (191-245)||(4690662-4690716)
chr7 (62-127)||(14274093-14274159)
chr7 (159-245)||(15095636-15095721)
chr7 (159-245)||(15140181-15140266)
chr7 (210-244)||(16999454-16999488)
chr7 (191-245)||(18990846-18990900)
chr7 (192-245)||(14180397-14180450)
chr7 (192-244)||(12322930-12322982)
chr7 (171-243)||(14259373-14259445)
chr7 (192-244)||(20620286-20620338)
chr7 (159-245)||(13698637-13698723)
chr7 (215-244)||(19283079-19283108)
chr7 (192-245)||(20214147-20214200)
chr7 (192-245)||(24269946-24269999)
chr7 (207-244)||(33002168-33002205)
chr7 (192-245)||(46386087-46386140)
chr7 (192-240)||(10277327-10277375)
chr7 (159-251)||(12557889-12557980)
[»] scaffold0462 (1 HSPs)
scaffold0462 (62-285)||(11093-11317)
[»] chr4 (32 HSPs)
chr4 (72-272)||(40620412-40620612)
chr4 (62-244)||(10694245-10694427)
chr4 (62-244)||(10908011-10908193)
chr4 (62-285)||(15008838-15009057)
chr4 (207-272)||(14186973-14187038)
chr4 (169-245)||(9924131-9924207)
chr4 (177-272)||(10057648-10057741)
chr4 (179-245)||(11478652-11478718)
chr4 (153-245)||(21157-21249)
chr4 (141-245)||(9870443-9870547)
chr4 (207-245)||(2424386-2424424)
chr4 (207-245)||(14549775-14549813)
chr4 (192-245)||(15115222-15115275)
chr4 (192-244)||(11425943-11425995)
chr4 (192-244)||(19610324-19610376)
chr4 (153-245)||(21062602-21062694)
chr4 (192-244)||(25091653-25091705)
chr4 (169-245)||(37019648-37019723)
chr4 (192-244)||(53630474-53630526)
chr4 (207-245)||(19434558-19434596)
chr4 (207-244)||(16998540-16998577)
chr4 (207-244)||(35811376-35811413)
chr4 (192-244)||(10356436-10356488)
chr4 (192-240)||(46001535-46001583)
chr4 (170-245)||(15613069-15613143)
chr4 (170-245)||(51993540-51993614)
chr4 (192-240)||(6633541-6633589)
chr4 (74-129)||(9622369-9622425)
chr4 (169-217)||(15011497-15011545)
chr4 (214-258)||(19022366-19022410)
chr4 (169-261)||(19243577-19243668)
chr4 (192-244)||(42875797-42875849)
[»] scaffold0083 (3 HSPs)
scaffold0083 (62-285)||(1807-2031)
scaffold0083 (207-245)||(5044-5082)
scaffold0083 (207-245)||(10754-10792)
[»] scaffold0046 (1 HSPs)
scaffold0046 (62-285)||(21735-21959)
[»] scaffold0058 (1 HSPs)
scaffold0058 (112-285)||(6288-6462)
[»] scaffold0061 (2 HSPs)
scaffold0061 (62-163)||(14667-14768)
scaffold0061 (62-163)||(23725-23826)
[»] scaffold0632 (1 HSPs)
scaffold0632 (192-285)||(1165-1259)
[»] scaffold0819 (1 HSPs)
scaffold0819 (177-285)||(5352-5460)
[»] scaffold0071 (1 HSPs)
scaffold0071 (207-272)||(15287-15352)
[»] scaffold0004 (2 HSPs)
scaffold0004 (159-240)||(110141-110222)
scaffold0004 (211-245)||(328287-328321)
[»] scaffold0802 (1 HSPs)
scaffold0802 (169-245)||(4708-4784)
[»] scaffold0577 (1 HSPs)
scaffold0577 (160-272)||(9029-9139)
[»] scaffold0439 (1 HSPs)
scaffold0439 (62-129)||(12111-12178)
[»] scaffold0156 (1 HSPs)
scaffold0156 (159-285)||(16572-16698)
[»] scaffold0113 (1 HSPs)
scaffold0113 (62-245)||(35362-35543)
[»] scaffold0628 (1 HSPs)
scaffold0628 (169-258)||(1044-1133)
[»] scaffold0104 (2 HSPs)
scaffold0104 (177-285)||(14942-15051)
scaffold0104 (177-285)||(16962-17071)
[»] scaffold0220 (1 HSPs)
scaffold0220 (169-245)||(19931-20007)
[»] scaffold0075 (1 HSPs)
scaffold0075 (153-245)||(60856-60948)
[»] scaffold0037 (2 HSPs)
scaffold0037 (159-245)||(112965-113052)
scaffold0037 (179-246)||(117805-117873)
[»] scaffold0032 (1 HSPs)
scaffold0032 (191-258)||(61834-61901)
[»] scaffold0205 (1 HSPs)
scaffold0205 (169-243)||(30631-30705)
[»] scaffold0153 (2 HSPs)
scaffold0153 (224-269)||(5329-5374)
scaffold0153 (224-269)||(12349-12394)
[»] scaffold0001 (3 HSPs)
scaffold0001 (192-245)||(77687-77740)
scaffold0001 (192-244)||(31994-32046)
scaffold0001 (192-244)||(37301-37353)
[»] scaffold1941 (1 HSPs)
scaffold1941 (169-245)||(116-191)
[»] scaffold0139 (1 HSPs)
scaffold0139 (214-285)||(23556-23628)
[»] scaffold0047 (1 HSPs)
scaffold0047 (192-244)||(79049-79101)
[»] scaffold0203 (1 HSPs)
scaffold0203 (191-258)||(17926-17993)
[»] scaffold0411 (1 HSPs)
scaffold0411 (159-245)||(13416-13501)
[»] scaffold0334 (1 HSPs)
scaffold0334 (207-245)||(533-571)
[»] scaffold0008 (1 HSPs)
scaffold0008 (159-245)||(135503-135588)
[»] scaffold0407 (1 HSPs)
scaffold0407 (207-244)||(11274-11311)
[»] scaffold0174 (1 HSPs)
scaffold0174 (177-285)||(13624-13731)
[»] scaffold1766 (1 HSPs)
scaffold1766 (169-245)||(695-770)
[»] scaffold1633 (1 HSPs)
scaffold1633 (192-244)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (192-244)||(468-520)
[»] scaffold0589 (1 HSPs)
scaffold0589 (153-245)||(4346-4438)
[»] scaffold0175 (1 HSPs)
scaffold0175 (141-245)||(8592-8695)
[»] scaffold0077 (2 HSPs)
scaffold0077 (192-244)||(34339-34391)
scaffold0077 (170-245)||(5929-6003)
[»] scaffold0036 (1 HSPs)
scaffold0036 (192-244)||(78185-78237)
[»] scaffold0020 (2 HSPs)
scaffold0020 (192-244)||(143611-143663)
scaffold0020 (192-245)||(168998-169051)
[»] scaffold0019 (2 HSPs)
scaffold0019 (192-244)||(24131-24183)
scaffold0019 (169-243)||(30048-30122)
[»] scaffold1939 (1 HSPs)
scaffold1939 (75-129)||(10-65)
[»] scaffold0064 (1 HSPs)
scaffold0064 (207-258)||(58761-58812)
[»] scaffold0043 (2 HSPs)
scaffold0043 (169-244)||(27954-28029)
scaffold0043 (169-244)||(42812-42887)
[»] scaffold1256 (1 HSPs)
scaffold1256 (191-245)||(2199-2253)
[»] scaffold0956 (1 HSPs)
scaffold0956 (192-258)||(2555-2621)
[»] scaffold0686 (1 HSPs)
scaffold0686 (232-274)||(1478-1520)
[»] scaffold0625 (1 HSPs)
scaffold0625 (191-245)||(5860-5914)
[»] scaffold0285 (1 HSPs)
scaffold0285 (207-245)||(19768-19806)
[»] scaffold0213 (1 HSPs)
scaffold0213 (191-245)||(19206-19260)
[»] scaffold0207 (1 HSPs)
scaffold0207 (159-245)||(13391-13476)
[»] scaffold0056 (1 HSPs)
scaffold0056 (179-245)||(67108-67174)
[»] scaffold0040 (1 HSPs)
scaffold0040 (207-245)||(106050-106088)
[»] scaffold0021 (2 HSPs)
scaffold0021 (62-127)||(16977-17043)
scaffold0021 (62-127)||(26508-26574)
[»] scaffold0601 (1 HSPs)
scaffold0601 (207-244)||(196-233)
[»] scaffold0256 (1 HSPs)
scaffold0256 (177-246)||(1845-1913)
[»] scaffold0241 (1 HSPs)
scaffold0241 (192-245)||(3182-3235)
[»] scaffold0149 (2 HSPs)
scaffold0149 (192-245)||(29572-29625)
scaffold0149 (207-245)||(21626-21664)
[»] scaffold0111 (2 HSPs)
scaffold0111 (192-241)||(5383-5432)
scaffold0111 (192-243)||(12534-12585)
[»] scaffold0035 (2 HSPs)
scaffold0035 (119-164)||(43866-43911)
scaffold0035 (94-154)||(39184-39245)
[»] scaffold0737 (1 HSPs)
scaffold0737 (192-244)||(4714-4766)
[»] scaffold0671 (1 HSPs)
scaffold0671 (153-245)||(4901-4993)
[»] scaffold0251 (1 HSPs)
scaffold0251 (169-245)||(20085-20160)
[»] scaffold0123 (1 HSPs)
scaffold0123 (169-245)||(7254-7330)
[»] scaffold0002 (1 HSPs)
scaffold0002 (153-245)||(398523-398615)
[»] scaffold0695 (1 HSPs)
scaffold0695 (169-244)||(6819-6893)
[»] scaffold0292 (1 HSPs)
scaffold0292 (172-243)||(7535-7606)
[»] scaffold0041 (1 HSPs)
scaffold0041 (192-239)||(5712-5759)
[»] scaffold0516 (1 HSPs)
scaffold0516 (207-245)||(5304-5342)
[»] scaffold0230 (2 HSPs)
scaffold0230 (207-241)||(6688-6722)
scaffold0230 (62-127)||(6910-6976)
[»] scaffold0217 (1 HSPs)
scaffold0217 (62-127)||(28584-28650)
[»] scaffold0042 (1 HSPs)
scaffold0042 (159-245)||(29355-29441)
[»] scaffold0018 (1 HSPs)
scaffold0018 (169-243)||(21672-21746)
[»] scaffold0026 (1 HSPs)
scaffold0026 (192-245)||(146723-146776)
[»] scaffold1521 (1 HSPs)
scaffold1521 (36-64)||(861-889)
[»] scaffold0452 (1 HSPs)
scaffold0452 (169-217)||(12649-12697)
[»] scaffold0254 (1 HSPs)
scaffold0254 (169-261)||(21625-21716)
[»] scaffold0152 (1 HSPs)
scaffold0152 (36-64)||(29830-29858)
[»] scaffold0151 (1 HSPs)
scaffold0151 (169-245)||(31086-31161)
[»] scaffold0096 (1 HSPs)
scaffold0096 (169-217)||(22075-22123)
[»] scaffold0065 (1 HSPs)
scaffold0065 (153-245)||(52543-52635)
[»] scaffold0028 (1 HSPs)
scaffold0028 (159-243)||(3053-3136)
[»] scaffold0003 (1 HSPs)
scaffold0003 (153-245)||(96360-96451)


Alignment Details
Target: scaffold0057 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 70032 - 69811
Alignment:
Q  65 ttctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  70032 ttctacagcctgaacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaat 69933  T
Q  165 taccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtct 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  69932 taccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtct 69833  T
Q  265 ctctccct-ttgcttctcctct 285  Q
    |||||||| ||| |||||||||    
T  69832 ctctccctcttggttctcctct 69811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 181; Significance: 8e-98; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 20967 - 21191
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  20967 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 21066  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21067 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgg 21166  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  21167 tctctctccctcttggttctcctct 21191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 74 - 285
Target Start/End: Original strand, 33994 - 34206
Alignment:
Q  74 ctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccaccta 173  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  33994 ctgaacttcaattcttatgttaattcattgaattacctactgtttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccaccta 34093  T
Q  174 catcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct- 272  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  34094 catcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctc 34193  T
Q  273 ttgcttctcctct 285  Q
    ||| |||||||||    
T  34194 ttggttctcctct 34206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 77 - 285
Target Start/End: Original strand, 4914 - 5123
Alignment:
Q  77 aacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccacctacat 176  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4914 aacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccacctacat 5013  T
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||    
T  5014 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttg 5113  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  5114 gttctcctct 5123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 77 - 285
Target Start/End: Original strand, 4914 - 5123
Alignment:
Q  77 aacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccacctacat 176  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4914 aacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccacctacat 5013  T
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||    
T  5014 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttg 5113  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  5114 gttctcctct 5123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 17011598 - 17011806
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  17011598 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 17011697  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17011698 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgg 17011797  T
Q  262 tctctctcc 270  Q
    |||||||||    
T  17011798 tctctctcc 17011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 29448710 - 29448934
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29448710 ttattctacagcctgaacttcaattcttatgttaattcattggtttacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 29448809  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||    
T  29448810 aattaccacctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtctcatcattaccttagtattgatgatcggtgg 29448909  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  29448910 tctctctccctcttggttctcctct 29448934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 265908 - 266090
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  265908 ttattctacagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 266007  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  266008 aattaccacctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 266090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 272
Target Start/End: Original strand, 31456908 - 31457040
Alignment:
Q  138 aaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccct 237  Q
    |||||||||||||  ||| | ||||| ||| |||||| |  |||||||| |||||| |||||| | |  ||||| |||||||||||||||||||||||||    
T  31456908 aaacctaatttcca-aatttccaaaactacaacctaccttgtgttaaatccagttt-cagaatcataccacttaaaattagagaaagttagtctcaccct 31457005  T
Q  238 taccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||||||||||||||    
T  31457006 taccttagtattgatgatcggcggtctctctccct 31457040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 10774730 - 10774622
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    ||||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  10774730 catgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttg 10774632  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  10774631 gttctcctct 10774622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 30616629 - 30616708
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||| ||| |||||||||    
T  30616629 acttagaattagagaaagtcagtcccacccttaccataatattgatgatcggcggtctctctccctcttggttctcctct 30616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 21556982 - 21556921
Alignment:
Q  211 agaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21556982 agaattactgaaggttagtctcacccttaccttagtattgatgatcggcggtctctctccct 21556921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 20469261 - 20469175
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | |||||||| || |||||||| ||| || |||||||||||||||||||||||| ||||||||||||||    
T  20469261 caaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccacccttaccttag 20469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 21618013 - 21617927
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||| ||| ||| || |||||||||||||||||||||||| ||||||||||||||    
T  21618013 caaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagagaaagttagtcccacccttaccttag 21617927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 6551343 - 6551289
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  6551343 ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 21554341 - 21554275
Alignment:
Q  206 tacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||| |||||||  ||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  21554341 tactcagaattactgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccct 21554275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 20566546 - 20566599
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||| ||||||||||||||||||||||||||||||||||    
T  20566546 tttcagaattatacaactttgaattagagaaagttagtctcacccttaccttag 20566599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 26832608 - 26832715
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    ||||||||||||| | |||||||| | || |||||||||||  ||| |||| || |||||||||| ||||||||||| || ||||||||||||||| |||    
T  26832608 catgttaaattca-tcttcagaatcacat-acttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctcttg 26832705  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  26832706 gttctcctct 26832715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 36508670 - 36508633
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36508670 acttagaattagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 25249903 - 25249827
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| |||||||||| || |||||||||||| || ||||| ||||| |||| |||||||  |||||||||||||    
T  25249903 acctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttaccttag 25249827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 25313687 - 25313611
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| |||||||||| || |||||||||||| || ||||| ||||| |||| |||||||  |||||||||||||    
T  25313687 acctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttaccttag 25313611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 17875927 - 17875993
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 17875993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||| |||||||||||||||||| ||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 21504009 - 21504065
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt 118  Q
    |||||||| | ||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  21504009 ttattctacaacctgaacatcagttcttatgttaattcattggatcacctactcttt 21504065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 22240924 - 22240877
Alignment:
Q  239 accttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  22240924 accttagtattgatgatcgacggtctctctccctcttggttctcctct 22240877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 22241920 - 22241873
Alignment:
Q  239 accttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  22241920 accttagtattgatgatcgacggtctctctccctcttggttctcctct 22241873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 22242916 - 22242869
Alignment:
Q  239 accttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  22242916 accttagtattgatgatcgacggtctctctccctcttggttctcctct 22242869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 22243912 - 22243865
Alignment:
Q  239 accttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  22243912 accttagtattgatgatcgacggtctctctccctcttggttctcctct 22243865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 272
Target Start/End: Original strand, 17876151 - 17876283
Alignment:
Q  138 aaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccct 237  Q
    |||||||||| ||| ||| |||| || ||| ||||||  | |||||||| || |||||||||| | || ||| |||||||  ||| |||||| |||||||    
T  17876151 aaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatcatat-actcagaattattgaaggttagtttcaccct 17876248  T
Q  238 taccttagtattgatgatcggcggtctctctccct 272  Q
    ||| ||||  | |||||||| ||||||||||||||    
T  17876249 tacattagattagatgatcgacggtctctctccct 17876283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 19921584 - 19921676
Alignment:
Q  136 caaaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtc 230  Q
    |||||||||||| ||| ||| | || |||||| ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||| |||||    
T  19921584 caaaacctaatt-cccaaatttccataattacaacctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaaggtagtc 19921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 31456721 - 31456787
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| ||||||| |||||||||||| || ||||||||| |||| |||||||||    
T  31456721 ttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaatcaa 31456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 7485002 - 7485050
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  7485002 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 20313200 - 20313248
Alignment:
Q  116 tttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    |||| |||||||||||||| ||||| |||||||| |||||| |||||||    
T  20313200 tttagcaatcaattccaaatcaaaatctaatttctctaatcatcaaaat 20313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 21405730 - 21405627
Alignment:
Q  141 cctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |||   ||||| ||| ||| ||| | ||||||||||| |||||||||| | || ||| |||||||   || |||||||||||||||||    
T  21405730 cctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcatat-actcagaattattaaaggttagtctcacccttac 21405632  T
Q  241 cttag 245  Q
    |||||    
T  21405631 cttag 21405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 62 - 274
Target Start/End: Original strand, 50001346 - 50001558
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  50001346 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 50001445  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  50001446 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcggcgg 50001545  T
Q  262 tctctctcccttt 274  Q
    |||||||||||||    
T  50001546 tctctctcccttt 50001558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 62 - 285
Target Start/End: Complemental strand, 46197927 - 46197703
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  46197927 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacataatttctctaatcatcaa 46197828  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |    
T  46197827 aattaccacctaaatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacag 46197728  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  46197727 tctctctccctcttggttctcctct 46197703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 62 - 272
Target Start/End: Complemental strand, 29763814 - 29763604
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| || || |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29763814 ttattctacagtctaaacttcaattcttatgttaattcattgtattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 29763715  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  29763714 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgtcgg 29763615  T
Q  262 tctctctccct 272  Q
    |||||||||||    
T  29763614 tctctctccct 29763604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 12327780 - 12327701
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  12327780 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttctcctct 12327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 51336494 - 51336559
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  51336494 acttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctccct 51336559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 13302869 - 13302955
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  13302869 caaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcacccttaccttag 13302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 4595938 - 4595852
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||  |||||||||||| |   ||||||||||||||||||||||||||||||||||||||    
T  4595938 caaaactacaacctacaacttgttaaattcgattttcagaattatacctcttagaattagagaaagttagtctcacccttaccttag 4595852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 42697745 - 42697837
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| |||||||||| || || ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||    
T  42697745 aatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcacccttaccttag 42697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 21995684 - 21995622
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  21995684 gttagtcccacccttatcttagtattgatgatcggcggtctctctccctcttggttctcctct 21995622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 24007252 - 24007183
Alignment:
Q  217 agagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    |||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| ||| |||||||||    
T  24007252 agagaaagctagtcccacccttaccttagtatagatgatcgacggtctctctccctcttggttctcctct 24007183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 42913049 - 42913102
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  42913049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 42913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 45755486 - 45755573
Alignment:
Q  158 tcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| ||| ||||||| | |||||||| || |||||||||| | || ||||| ||||| |||| ||||||||||||||||||||||    
T  45755486 tcaaaactacaacctacaacttgttaaatccacttttcagaatcatataacttataattaaagaaggttagtctcacccttaccttag 45755573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 24723415 - 24723350
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||||| |||||| | |  |||||||||||||||||||||||| ||||||||||||||    
T  24723415 tgttaaattcagttt-cagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 24723350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 19676711 - 19676763
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 7051959 - 7051921
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7051959 acttagaattagagaaagttagtcccacccttaccttag 7051921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 16058366 - 16058300
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||||||  | |||||||||    
T  16058366 tttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcgg 16058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 44822312 - 44822246
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 44822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 51324519 - 51324557
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  51324519 acttagaattagggaaagttagtctcacccttaccttag 51324557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 21188216 - 21188149
Alignment:
Q  61 cttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    ||||||||| | ||||||| |||||| |||| |||||||| |||||||||||| |||| |||||||||    
T  21188216 cttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaatcaa 21188149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 21708127 - 21708201
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || |||||||||||| | |||| |||||||  ||| ||||||| |||||||||||||    
T  21708127 acctacaacatgttaaatccaattttcagaattaca-tactcagaattattgaaggttagtcccacccttacctta 21708201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 21712670 - 21712744
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || |||||||||||| | |||| |||||||  ||| ||||||| |||||||||||||    
T  21712670 acctacaacatgttaaatccaattttcagaattaca-tactcagaattattgaaggttagtcccacccttacctta 21712744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 21239086 - 21239048
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  21239086 acttagaattagagaaagttagtcccacccataccttag 21239048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 22350684 - 22350769
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||| | | |||| |||||||  ||| ||||||| ||||||||||||||    
T  22350684 caaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattgaaggttagtcccacccttaccttag 22350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 17901824 - 17901783
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgat 255  Q
    ||||||||||| |||||||||||||||||||| || ||||||    
T  17901824 attagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 20633683 - 20633631
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||| ||||||||| |||||||| ||||    
T  20633683 tttcagaattatacaacttagaattagagcaagttagtcccacccttatctta 20633631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 34392648 - 34392704
Alignment:
Q  74 ctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||| ||| | |||| ||||||||| ||||||||||||||||| |||||||||||    
T  34392648 ctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaatt 34392704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 41373348 - 41373439
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||| |||||||||| || |||||||||| || | |||||  ||||  ||| ||||||| |||||||||||||| ||  |||||||||||    
T  41373348 acctacaacatgttaaatccaattttcagaatcaa-tgacttaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 41373439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 3e-94; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 62 - 272
Target Start/End: Complemental strand, 21081151 - 21080941
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  21081151 ttattctacagcctgaacttcaattcttatgttaattcattgttttacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 21081052  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21081051 aattaccacttacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgg 21080952  T
Q  262 tctctctccct 272  Q
    |||||||||||    
T  21080951 tctctctccct 21080941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 21915494 - 21915718
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||    
T  21915494 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctattctttaacaatcaattccaaaccaaaacctaatttctctattcatcaa 21915593  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21915594 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcacacccttactttagtattgatgatcggcgg 21915693  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  21915694 tctctctccctcttggttctcctct 21915718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 62 - 272
Target Start/End: Original strand, 25184059 - 25184269
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25184059 ttattctacagtctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 25184158  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    |||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25184159 aattaccacctacaacatgttaaatctagttttcagaattaaaatacttagaattagagaaagttagtctcacccttaccttagtattgatgattggcgg 25184258  T
Q  262 tctctctccct 272  Q
    |||||||||||    
T  25184259 tctctctccct 25184269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 18358149 - 18357975
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  18358149 ttattctacagcctgaacttcaattcttatgttaattcattgaattacatactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 18358050  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccc 236  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  18358049 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaccc 18357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 357896 - 357975
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  357896 acttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttctcctct 357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 14694303 - 14694379
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14694303 acctacatcatgttaaatccaattttcaaaattaaattacttagaattatagaaagttagtctcacccttaccttag 14694379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 22501939 - 22502037
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||| ||| ||| ||| |||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  22501939 aaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 22502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 22509873 - 22509971
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||| ||| ||| ||| |||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  22509873 aaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 22509971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 40912320 - 40912414
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||| || ||| |||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggttgtctctctctctcttggttctcctct 40912414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 25142171 - 25142257
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  25142171 caaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcccacccttaccttag 25142257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 27852645 - 27852721
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  27852645 acctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcccacccttaccttag 27852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 27484514 - 27484447
Alignment:
Q  219 agaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||    
T  27484514 agaaagttagtctcacccttaccttagtattgatgatcggtggtatctctccctcttggttctcctct 27484447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 34858212 - 34858164
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34858212 gttagtcccacccttaccttagtattgatgatcggcggtctctctccct 34858164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 34873274 - 34873226
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34873274 gttagtcccacccttaccttagtattgatgatcggcggtctctctccct 34873226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 34491258 - 34491212
Alignment:
Q  226 tagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34491258 tagtcccacccttaccttagtattgatgatcggcggtctctctccct 34491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 3539805 - 3539890
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| ||| ||||||| | ||||||||||  |||||||||||| |  ||||| |||||||||||||||||| ||||||||||||||    
T  3539805 aaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagagaaagttagtcccacccttaccttag 3539890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 24516164 - 24516239
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  24516164 acctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 17307486 - 17307552
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 17307552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 23068482 - 23068408
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||||||||||||||||    
T  23068482 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtctcacccttacctt 23068408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 24884231 - 24884297
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||||| ||||||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  24884231 ttattctataacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 24884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 19201252 - 19201199
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||| |||||    
T  19201252 tttcagaattatacaacttagaattagagaaagttagtctcacccttaacttag 19201199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 1383647 - 1383545
Alignment:
Q  138 aaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccct 237  Q
    |||||||||| ||| ||| | ||||| ||| ||||||  | |||||||| |||||| |||||| | |  |||||||||||||||||||||||||||||||    
T  1383647 aaacctaatt-cccaaatttccaaaactacaacctaccacctgttaaatccagttt-cagaatgatacaacttagaattagagaaagttagtctcaccct 1383550  T
Q  238 tacct 242  Q
    |||||    
T  1383549 tacct 1383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 12626614 - 12626546
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||||| | ||||||| ||||||||| ||||||||||  |||||||||||||||| |||||||||||    
T  12626614 ttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaatcaatt 12626546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 19647104 - 19647172
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctac-tctttaacaatcaatt 129  Q
    |||||||| | ||||||| |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  19647104 ttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaatcaatt 19647172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 25046079 - 25046171
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| |||  |||||| |||||||||| || || ||||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  25046079 aatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 25046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 2523821 - 2523747
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| ||||||||| ||| |||  ||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  2523821 acctacaacatgttaaactcaattta-agaattatacaacttagaattagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 18390279 - 18390229
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagt 229  Q
    ||||||||||  |||||||||||| || |||||||||||||||||||||||    
T  18390279 tgttaaattctattttcagaattatatcacttagaattagagaaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 44072572 - 44072610
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  44072572 acttagaattagtgaaagttagtctcacccttaccttag 44072610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 45535796 - 45535862
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||| ||||||||||||| |||||||||||| |||| |||||||||    
T  45535796 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaatcaa 45535862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 5986154 - 5986230
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | |||||||| || |||||||||||| |  ||||||||||| |||| ||| ||| ||||||||||||||    
T  5986154 acctacaacttgttaaatccaattttcagaattatacaacttagaattaaagaaggttcgtcccacccttaccttag 5986230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 9975929 - 9975981
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||  ||||||||||||    
T  9975929 tttcagaattatacaacttagaattagagaaagttagtccaacccttacctta 9975981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 22251500 - 22251448
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||| ||||| ||||||||||||||    
T  22251500 tttcagaattatacaacttagaattagagaaaattagtttcacccttacctta 22251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 36734578 - 36734530
Alignment:
Q  116 tttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    ||||||||||||||||||| ||||| |||||||| |||||| |||||||    
T  36734578 tttaacaatcaattccaaatcaaaatctaatttctctaatcatcaaaat 36734530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 45535666 - 45535722
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt 118  Q
    |||||||| | ||||||| |||||| ||||||||||||| |||||||||||| ||||    
T  45535666 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacacttt 45535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 18240824 - 18240857
Alignment:
Q  239 accttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||||||||||||| ||||||||||||||    
T  18240824 accttagtattgatgatcgacggtctctctccct 18240857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 29602117 - 29602182
Alignment:
Q  221 aaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||||||||| ||  |||||||||||  |||||| || ||| |||||||||    
T  29602117 aaagttagtctcacccttaccttagaatgaatgatcggcggcttctctctctcttggttctcctct 29602182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 24436648 - 24436700
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||| ||||||||||||| |||||||| ||||    
T  24436648 tttcagaattatacaacttagaattcgagaaagttagtcccacccttatctta 24436700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 90
Target Start/End: Original strand, 31345991 - 31346019
Alignment:
Q  62 ttattctatagcctgaacttcaattctta 90  Q
    |||||||||||||||||||||||||||||    
T  31345991 ttattctatagcctgaacttcaattctta 31346019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 37270699 - 37270747
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  37270699 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 5e-93; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 62 - 285
Target Start/End: Complemental strand, 15900836 - 15900612
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15900836 ttattttacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 15900737  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  15900736 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttggtctcacccttaccttagtattgaagatcggcgg 15900637  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  15900636 tctctctccctcttggttctcctct 15900612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 74 - 285
Target Start/End: Complemental strand, 15173623 - 15173411
Alignment:
Q  74 ctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccaccta 173  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  15173623 ctgaacttcaattcttatgttaattcattgaattacctattctttaacaatcaattccaaaccaaaacctaatttctttaatcatcaaaattaccaccta 15173524  T
Q  174 catcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct- 272  Q
    |||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||     
T  15173523 catcacattaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaccattaccttagtattgatgatcggcggtctctctccctc 15173424  T
Q  273 ttgcttctcctct 285  Q
    ||| |||||||||    
T  15173423 ttggttctcctct 15173411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 15891751 - 15891629
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15891751 ttattttacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 15891652  T
Q  162 aattaccacctacatcatgttaa 184  Q
    |||||||||||||||||||||||    
T  15891651 aattaccacctacatcatgttaa 15891629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 27330055 - 27329953
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctct 268  Q
    ||||||| ||||||||| ||| ||| |||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27330055 acctacaacatgttaaactcaattt-cagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctct 27329957  T
Q  269 ccct 272  Q
    ||||    
T  27329956 ccct 27329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 27390795 - 27390693
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctct 268  Q
    ||||||| ||||||||| ||| ||| |||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27390795 acctacaacatgttaaactcaattt-cagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctct 27390697  T
Q  269 ccct 272  Q
    ||||    
T  27390696 ccct 27390693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 20733264 - 20733202
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  20733264 gttagtctcacccttaccttagtattgatgatcagcggtctctctccctcttggttctcctct 20733202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 27852193 - 27852300
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    ||||||||||||| | |||||||| | || ||||||||| |  ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||    
T  27852193 catgttaaattca-tcttcagaatcacat-acttagaatgattgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccctcttg 27852290  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  27852291 gttctcctct 27852300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 18928658 - 18928734
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  ||||||||||||||||||||||||  |||||||||||||    
T  18928658 acctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcctacccttaccttag 18928734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 19655305 - 19655231
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| ||||||||| ||| ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  19655305 acctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 27572188 - 27572122
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||| ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  27572188 catgttaaattcaattt-cagaattatacgacttagaattagagaaagttagtctcacccttacctta 27572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 28103467 - 28103420
Alignment:
Q  225 ttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  28103467 ttagtcccacccttaccttagtattgatgatcggcggtctctctccct 28103420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 15890796 - 15890711
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  15890796 caaaactacaacctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 15998888 - 15998942
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  15998888 ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 23501641 - 23501725
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| ||| ||||||| | ||||||||||||||||||||||||||  | |||||||||  ||| ||||||||||||||||||||||    
T  23501641 aaaactacaacctacaacttgttaaattcagttttcagaattaaa-catttagaattattgaaggttagtctcacccttaccttag 23501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 28948590 - 28948628
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28948590 acttagaattagagaaagttagtctcacccttaccttag 28948628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 31731989 - 31731903
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||| |||| || |||||||||||| |  |||||||||| ||||||||||||| ||||||||||||||    
T  31731989 caaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggagaaagttagtcccacccttaccttag 31731903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 27125514 - 27125477
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27125514 acttagaattagagaaagttagtctcacccttacctta 27125477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 12041687 - 12041619
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||| || |||||||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  12041687 catgttaaatccaattttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 12041619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 24267849 - 24267900
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||    
T  24267849 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 19772741 - 19772667
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  19772741 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 19772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 19401062 - 19401146
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| |||||||||||||    
T  19401062 caaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttacctta 19401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 18703568 - 18703620
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||||||||    
T  18703568 tttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 18703620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 18709503 - 18709555
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||||||||    
T  18709503 tttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 18709555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 18585549 - 18585615
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||||||||||||||||| || ||||| ||| |||| |||||||||    
T  18585549 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaa 18585615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 18585820 - 18585854
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacc 241  Q
    |||||||||||||||||||||||| ||||||||||    
T  18585820 acttagaattagagaaagttagtcccacccttacc 18585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 22806716 - 22806790
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| ||||||||||  | ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  22806716 acctacaacatgttaaatataattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 22806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 29045293 - 29045334
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgat 255  Q
    ||||||||||| |||||||||||||||||||| || ||||||    
T  29045293 attagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 19825516 - 19825472
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  19825516 attagagaaagctagtctcacccttaccttagattagatgatcgg 19825472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 285
Target Start/End: Complemental strand, 29398 - 29174
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29398 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 29299  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  29298 aattaccatctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccactcttaccttagtattgatgatcgacgg 29199  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  29198 tctctctccctcttggttctcctct 29174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 120931 - 121005
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  120931 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 23478952 - 23479176
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  23478952 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcacttccaaaccaaaacctaatttctctaatcatcaa 23479051  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23479052 aattaccacctacatcatgttaaatccagttttcataatttaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgg 23479151  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  23479152 tctctctccctcttggttctcctct 23479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 16198706 - 16198930
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16198706 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttcccttatcatcaa 16198805  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||    
T  16198806 aattaccacctacatcatgttaaatccagttttcagaatgaaaatacttagaattagagaaagttagtcccacttttaccttagtattgatgatcggtgg 16198905  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  16198906 tctctctccctcttggttctcctct 16198930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 19880693 - 19880916
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  19880693 ttattctacagcctgaacttcaattcttatgttaattcatttaattacctactctttaacaatcaattccaaaacaaaacctaatttctctaatcatcaa 19880792  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19880793 aattaccacctacatcatgttaaatttagttttcagaattaaaat-cttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgg 19880891  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  19880892 tctctctccctcttggttctcctct 19880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 26454576 - 26454802
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaat--ttccctaatcttc 159  Q
    |||||||| ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  ||| |||||  ||    
T  26454576 ttattctacagcctgaactttaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatatttctctaataatc 26454675  T
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggc 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26454676 aaaattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggc 26454775  T
Q  260 ggtctctctccct-ttgcttctcctct 285  Q
    | ||| ||||||| ||| |||||||||    
T  26454776 gatctttctccctcttggttctcctct 26454802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 17159102 - 17158936
Alignment:
Q  105 attacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||| |||||||    
T  17159102 attacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccacctacatcatgttaaatctagttttcaaaattaaa 17159003  T
Q  205 ttacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccc 271  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  17159002 atacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtggtctctctccc 17158936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 25657696 - 25657513
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  25657696 ttattctacagcctgaacatcaattcttatgttaattcattgaattacctactctttaacaatcaatttcaaaccaaaacctaatttctctaatcatcaa 25657597  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  25657596 aattaccacctacatcatgttaaatccaattttcagaattaaaatacttagaattagagaaagttactcccacccttactttag 25657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 36727122 - 36727037
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| ||| ||||||| | |||||||| || |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  36727122 aaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaagttagtctcacccttaccttag 36727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 45469294 - 45469218
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||  |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  45469294 acctacaacttgttaaattcgattttcagaattataccacttagaattagagaaagttagtctcacccttaccttag 45469218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 20022125 - 20022026
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||| ||| ||||||| | ||||||||||  |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  20022125 caaaactacaacctacaacttgttaaattcgattttcagaattataccacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 20022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 12577901 - 12577959
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  12577901 attagagaaagttagtcccacccttaccttagtattgatgatcagcagtctctctccct 12577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 41680163 - 41680091
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    |||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41680163 attaaagaaggttagtcccacctttaccttagtattgatgatcggcggtctctctccctcttggttctcctct 41680091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 23900061 - 23899986
Alignment:
Q  170 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| | ||||||||||| || ||||| ||| || |||||||||||||||||||||||| ||||||||||||||    
T  23900061 cctacaacttgttaaattcaattctcagagttatatcacttagaattagagaaagttagtcacacccttaccttag 23899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 20083690 - 20083638
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  20083690 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 20879343 - 20879411
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactc-tttaacaatcaatt 129  Q
    |||||||| | ||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  20879343 ttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaatcaatt 20879411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 22254743 - 22254819
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | |||||||| || |||||||||||| |  |||||||||||||||||||||||| |||| |||||||||    
T  22254743 acctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccaccattaccttag 22254819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 4380670 - 4380616
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  4380670 ttttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 22237062 - 22237024
Alignment:
Q  232 cacccttaccttagtattgatgatcggcggtctctctcc 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22237062 cacccttaccttagtattgatgatcggcggtctctctcc 22237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 31722578 - 31722492
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||  |||||| ||||| |  |||||||||||||||||||||||| |||||||| |||||    
T  31722578 caaaactacaacctacaacttgttaaattcgattttcaaaattataccacttagaattagagaaagttagtcccacccttatcttag 31722492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 18761447 - 18761500
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  18761447 ttttcagaattataccacttagaattagagaaagttagtcgcacccttacctta 18761500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 17906923 - 17906848
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | |||||||| |||||| |||||| | |  |||||||||||||||||||||||| ||||||||||||||    
T  17906923 acctacaacttgttaaatccagttt-cagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 17906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 5761548 - 5761586
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5761548 acttagaattagagaaagttagtcccacccttaccttag 5761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 22532169 - 22532131
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22532169 acttagaattagagaaagttagtcccacccttaccttag 22532131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 22536854 - 22536816
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22536854 acttagaattagagaaagttagtcccacccttaccttag 22536816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 6101805 - 6101752
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| |||| |||||||||    
T  6101805 tttcagaattatacaacttagaattagagaaagttagtcccacctttaccttag 6101752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 6573093 - 6573060
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||||||||||||||||||||||||||    
T  6573093 acttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 17218701 - 17218754
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||| | ||||||||| ||||||||||||||| |||||||| ||||    
T  17218701 ttttcagaattataatacttagaactagagaaagttagtcccacccttatctta 17218754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 20397562 - 20397509
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||||||||||||| || ||||||||||||||    
T  20397562 tttcagaattatacaacttagaattagagaaagttaatcccacccttaccttag 20397509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 6202776 - 6202824
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || |||||||||||||||||||||||||||||||    
T  6202776 tttcagaattatacaacgtagaattagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 19700122 - 19700214
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| |||||||||| |  || | ||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  19700122 aatcctcaaaactacaacctacaacatgttaaatccgattcttagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 19700214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 21676773 - 21676717
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt 118  Q
    |||||||| | ||||||| |||||| |||| |||||||| |||||||||||||||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactcttt 21676717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 22483650 - 22483706
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt 118  Q
    |||||||| | ||||||| ||||||||||||||||||||   |||||||||||||||    
T  22483650 ttattctacaacctgaacatcaattcttatgttaattcatcagattacctactcttt 22483706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 23889785 - 23889852
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||| ||| |||||||| |  || |||||||||||||||||| ||||||||||| |||||    
T  23889785 catgttaaattcaattt-cagaattatacaacctagaattagagaaagttaatctcacccttagcttag 23889852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 42817959 - 42817907
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||| |||| |||||||||||||    
T  42817959 tttcagaattatacaacttagaattagagaaagtaagtcccacccttacctta 42817907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 23419427 - 23419494
Alignment:
Q  178 atgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||| || || ||||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  23419427 atgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 23419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 22317975 - 22317910
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| ||||||||||||||    
T  22317975 tgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttaccttag 22317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 23948230 - 23948316
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | |||||||| || |||||||||| | |  ||||||||||| |||| ||||||  ||||||||||||||    
T  23948230 caaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccacccttaccttag 23948316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 39936044 - 39936007
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||| || |||||||||||||    
T  39936044 acttagaattagagaaagttaatcccacccttacctta 39936007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 19140765 - 19140816
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||| ||||| |||||||||||||    
T  19140765 tttcagaattatacaacttagaattagagaaag-tagtcccacccttacctta 19140816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 22610436 - 22610380
Alignment:
Q  74 ctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||| ||| | |||| ||||||||| ||||||||||||||||| |||||||||||    
T  22610436 ctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaatt 22610380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 36306019 - 36306063
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  36306019 attagagaaagctagtctcacccttaccttagattagatgatcgg 36306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 37292705 - 37292753
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  37292705 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 62 - 269
Target Start/End: Original strand, 16979782 - 16979989
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16979782 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 16979881  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  16979882 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcgacgg 16979981  T
Q  262 tctctctc 269  Q
    ||||||||    
T  16979982 tctctctc 16979989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 22652643 - 22652825
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22652643 ttattctacagcctgaacttcaattcttatgttaattcactagattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 22652742  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  22652743 aattgcgacctacatcatgttaaatctagttttcagaattaaattacttagaattagagaaagttagtcccactcttacctta 22652825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 36528869 - 36528947
Alignment:
Q  194 tcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  36528869 tcagaattatattacttagaattagagaaagttaatcccacccttaccttagtattgatgatcggcggtctctctccct 36528947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 3264009 - 3263935
Alignment:
Q  198 aattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||| ||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  3264009 aattatattacttagaattagagaaggttaatccgacccttaccttagtattgatgatcggcggtctctctccct 3263935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 24177788 - 24177694
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||| |  ||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttagtattgataatcggcggtctctctccctcttggttctcctct 24177694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 15446905 - 15446840
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  15446905 acttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccct 15446840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 33565064 - 33565140
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  33565064 acctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcacacccttaccttag 33565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 13522530 - 13522463
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaatt 129  Q
    |||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  13522530 ttattctacaacctgaacatcaattcttatgttaattcattggattacctactctttaacgatcaatt 13522463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 52988923 - 52988830
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||||||| | |||||||| | || ||| |||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52988923 catgttaaattca-tcttcagaatcacat-actcagaattattgaaggttagtctcacccttaccttagtattgatgatctgcggtctctctccct 52988830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 37641524 - 37641462
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  37641524 gttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttctcctct 37641462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 13185842 - 13185948
Alignment:
Q  138 aaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccct 237  Q
    |||||||||| ||| ||| | ||||| ||| ||||||| | ||||||||||  |||| ||||||| || ||||| |||||||||||||||||| ||||||    
T  13185842 aaacctaatt-cccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaagttagtcccaccct 13185940  T
Q  238 taccttag 245  Q
    ||||||||    
T  13185941 taccttag 13185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 22758909 - 22758835
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| ||||||||||||||||||||    
T  22758909 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 52465391 - 52465345
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctcc 270  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  52465391 gttagtcacacccttaccttagtattgatgatcggcggtctctctcc 52465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 11259411 - 11259483
Alignment:
Q  171 ctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||| |||| |||||||| ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11259411 ctacaacatgctaaattcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctta 11259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 14967203 - 14967264
Alignment:
Q  211 agaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||  ||| ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  14967203 agaattattgaaggttagtcccccccttaccttagtattgatgatcggcggtctctctccct 14967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 11885632 - 11885560
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacc 241  Q
    ||||||| | |||||||| || |||||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  11885632 acctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 35961003 - 35960927
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  || |||||||||||||||||| || ||||||||||||||    
T  35961003 acctacaacttgttaaattcaattttcagaattataccacatagaattagagaaagttaatcccacccttaccttag 35960927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 11563692 - 11563791
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||| ||| ||||||| | |||||||||   |||||||||||| |  |||||||||||||||| ||||||| ||||||||||||||  | |||||||||    
T  11563692 caaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagagaaggttagtcccacccttaccttagattagatgatcgg 11563791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 14508847 - 14508896
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacc 241  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  14508847 tttcagaattatacaacttagaattagagaaagttagtctcacccttacc 14508896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 31223865 - 31223824
Alignment:
Q  231 tcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  31223865 tcacccttaccttagtattgatgatcggtggtctctctccct 31223824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17539106 - 17539158
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||| ||||||||||||||||||||||||    
T  17539106 tttcagaattatacaacttagaattagataaagttagtctcacccttacctta 17539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 25202059 - 25202107
Alignment:
Q  116 tttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  25202059 tttaacaatcaattccaaatcaaaacctaatttctctaatcatcaaaat 25202107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 45803519 - 45803451
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||||| | |||| || ||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  45803519 ttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaatcaatt 45803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 48631202 - 48631270
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||||| | ||||||| |||||||||||||||||||| || ||||||||| |||| |||||||||||    
T  48631202 ttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaatcaatt 48631270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 17694045 - 17694115
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||| |||| |||| ||| |||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  17694045 acctacaacatgctaaactcaatttt-agaattatacaacttagaattagagaaagttagtctcacccttac 17694115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 5200280 - 5200242
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5200280 acttagaattagagaaagttagtcccacccttaccttag 5200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 9510953 - 9510915
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9510953 acttagaattagagaaagttagtttcacccttaccttag 9510915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 9518928 - 9518890
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9518928 acttagaattagagaaagttagtttcacccttaccttag 9518890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 15566743 - 15566797
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||| ||||||||| ||||    
T  15566743 ttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 16050942 - 16050980
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16050942 acttagaattagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 17518925 - 17518859
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||| ||||||  | |||||||||    
T  17518925 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcgg 17518859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 17533787 - 17533721
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||| ||||||  | |||||||||    
T  17533787 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcgg 17533721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 18699505 - 18699431
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  18699505 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 18699431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 19568245 - 19568207
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19568245 acttagaattagagaaagttagtcccacccttaccttag 19568207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 40812848 - 40812886
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40812848 acttagaattagagaaagttagtcccacccttaccttag 40812886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 42324056 - 42323970
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| ||||| ||||||| |||||||||||| |  ||||| ||||| | || ||||||| ||||||||||||||    
T  42324056 caaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaataatgttagtcccacccttaccttag 42323970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 49900730 - 49900796
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||||||  | |||||||||    
T  49900730 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcgg 49900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 15931545 - 15931508
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  15931545 acttagaattagagaaagttagtctcacctttacctta 15931508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 48043605 - 48043557
Alignment:
Q  116 tttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    ||||||||||||||||||| ||||| |||||||| |||||| |||||||    
T  48043605 tttaacaatcaattccaaatcaaaatctaatttctctaatcatcaaaat 48043557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 45577729 - 45577655
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || |||||||||| || |||||||  ||||  ||| |||||||||||||||||||||    
T  45577729 acctacaacatgttaaatccaattttcagaatcaa-ttacttaagattattgaatgttagtctcacccttacctta 45577655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 21845778 - 21845745
Alignment:
Q  116 tttaacaatcaattccaaaccaaaacctaatttc 149  Q
    ||||||||||||||||||| ||||||||||||||    
T  21845778 tttaacaatcaattccaaatcaaaacctaatttc 21845745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 10311527 - 10311575
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  10311527 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 62 - 272
Target Start/End: Original strand, 8830 - 9040
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||    
T  8830 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttcccttctcatcaa 8929  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  8930 aattaccacctacatcatgttcaattcagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtgg 9029  T
Q  262 tctctctccct 272  Q
    || ||||||||    
T  9030 tcactctccct 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 62 - 272
Target Start/End: Complemental strand, 29052364 - 29052154
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29052364 ttattctacagcctgaacttcaattcttatgttaattaattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 29052265  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  29052264 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacgg 29052165  T
Q  262 tctctctccct 272  Q
    | |||||||||    
T  29052164 tttctctccct 29052154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 62 - 285
Target Start/End: Complemental strand, 16550184 - 16549963
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||    
T  16550184 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatc---aa 16550088  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    
T  16550087 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcag 16549988  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  16549987 tctctctccctcttggttctcctct 16549963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 16615478 - 16615699
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||    
T  16615478 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatc---aa 16615574  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    
T  16615575 aattaccacctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcag 16615674  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  16615675 tctctctccctcttggttctcctct 16615699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 32160382 - 32160199
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32160382 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 32160283  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32160282 aattatcacctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcttacccttaccttag 32160199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 14218981 - 14218894
Alignment:
Q  158 tcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| ||| ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  14218981 tcaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcacccttaccttag 14218894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 35771546 - 35771440
Alignment:
Q  138 aaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcaccct 237  Q
    |||||||||| ||| ||| | ||||| ||| ||||||| | ||||||||||  |||||||||||| || |||||||||||||||||||||||| ||||||    
T  35771546 aaacctaatt-cccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaaagttagtcccaccct 35771448  T
Q  238 taccttag 245  Q
    ||||||||    
T  35771447 taccttag 35771440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 30820234 - 30820123
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||| ||| ||||||| | |||||||| |||||| |||||||| || ||| |||||||  ||| ||||||| |||||| ||||||||||||||||||||    
T  30820234 caaaactacaacctacaacctgttaaatccagttt-cagaattacat-actcagaattactgaaggttagtcccaccctcaccttagtattgatgatcgg 30820137  T
Q  259 cggtctctctccct 272  Q
    ||||||||||||||    
T  30820136 cggtctctctccct 30820123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 4071787 - 4071873
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | |||||||| || |||||||| ||| || |||||||||||||||||||||||| ||||||||||||||    
T  4071787 caaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccacccttaccttag 4071873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 19485993 - 19485931
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  19485993 gttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttctcctct 19485931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 15289066 - 15289158
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| | |||||||| || |||||||| ||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  15289066 aatcctcaaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaagttggtcccacccttaccttag 15289158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 13147524 - 13147458
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||| | | |||||||||    
T  13147524 tttcagaattatataacttagaattagagaaagttagtcccacccttaccttaatttagatgatcgg 13147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 48807390 - 48807324
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||  |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  48807390 tgttaaattcgattttcagaattataccacttagaattagagaaagttagtcccacccttaccttag 48807324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 12127237 - 12127149
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  12127237 acctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 12127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 11067468 - 11067520
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 32433641 - 32433589
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 46579771 - 46579731
Alignment:
Q  232 cacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46579771 cacccttaccttagtattgatgatcggcggtctctctccct 46579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 12754676 - 12754611
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||| |||||| |||||| | || |||||||||||||||||||||||| ||||||||||||||    
T  12754676 tgttaaatccagttt-cagaatcatataacttagaattagagaaagttagtcccacccttaccttag 12754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 18955329 - 18955383
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  18955329 ttttcagaattataacacttagaattagagaaagttagtctcacctttaccttag 18955383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 44374843 - 44374909
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  ||||||||||||||||||||| |||||||||||||||||  | |||||||||    
T  44374843 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcgg 44374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 44383708 - 44383774
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  ||||||||||||||||||||| |||||||||||||||||  | |||||||||    
T  44383708 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcgg 44383774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 47974857 - 47974819
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47974857 acttagaattagagaaagttagtctcacccttaccttag 47974819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 11054663 - 11054767
Alignment:
Q  141 cctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |||   ||||||||| ||||||| | ||||||||||| |||||||||| |||  ||||||||| |  ||| ||||||| |||||||||    
T  11054663 cctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattttcagaatcaaa-cacttagaatcattgaaggttagtcccacccttac 11054761  T
Q  241 cttagt 246  Q
    ||||||    
T  11054762 cttagt 11054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 16078317 - 16078382
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||  |||||| ||||| |  |||||||||||||||||||||||| |||||||||||||    
T  16078317 tgttaaattcgattttcataattataccacttagaattagagaaagttagtcccacccttacctta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 36685229 - 36685118
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||| ||| ||||||| | |||||||| |||||| |||||||| || ||| |||||||  ||| ||| ||  |||||||||||||||||||||||||      
T  36685229 caaaactacaacctacaacctgttaaatccagttt-cagaattacat-actcagaattattgaaggttggttccacccttaccttagtattgatgatcaa 36685132  T
Q  259 cggtctctctccct 272  Q
    ||||||||||||||    
T  36685131 cggtctctctccct 36685118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 8851211 - 8851159
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 14928362 - 14928290
Alignment:
Q  171 ctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||| |||||||||| || ||||||||||||||  |||||||||||  ||| ||||||| ||||||||||||    
T  14928362 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 14928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 15351828 - 15351756
Alignment:
Q  171 ctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||| |||||||||| || ||||||||||||||  |||||||||||  ||| ||||||| ||||||||||||    
T  15351828 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 15351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 4690716 - 4690662
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||| |||| |||||||||    
T  4690716 ttttcagaattatacaacttagaattagagaaagttagtcccacctttaccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 14274093 - 14274159
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  14274093 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 14274159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 15095721 - 15095636
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| ||||||||||||||    
T  15095721 caaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttaccttag 15095636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 15140181 - 15140266
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||| | |  |||||||||||| ||| ||||||||||||| ||||||||    
T  15140181 caaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtctcacccataccttag 15140266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 16999454 - 16999488
Alignment:
Q  210 tagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||||||||||||||    
T  16999454 tagaattagagaaagttagtctcacccttacctta 16999488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 18990846 - 18990900
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  ||||||||||||||||||||||| ||||| |||||||||    
T  18990846 ttttcagaattataacacttagaattagagaaagttagtatcacctttaccttag 18990900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 14180450 - 14180397
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||||||||||||    
T  14180450 tttcagaattatacaacttagaattagagaaaattagtcacacccttaccttag 14180397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 12322982 - 12322930
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||  |||||||||||||    
T  12322982 tttcagaattatacaacttagaattagagaaagttagttccacccttacctta 12322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 14259373 - 14259445
Alignment:
Q  171 ctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  14259373 ctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 14259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 20620286 - 20620338
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||||||||    
T  20620286 tttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 20620338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 13698723 - 13698637
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||| | ||||| |||| || |||||||||||||   ||||| ||||| ||||||||||||  |||||||||||||    
T  13698723 caaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaagaaagttagtcctacccttaccttag 13698637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 19283079 - 19283108
Alignment:
Q  215 ttagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||||||||    
T  19283079 ttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 20214147 - 20214200
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||| |||||| ||||||||||||| ||||||||||||||    
T  20214147 tttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttag 20214200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 24269999 - 24269946
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||| ||||||||||||||| || ||||||||||||||    
T  24269999 tttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttag 24269946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 33002168 - 33002205
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  33002168 acttagaattagagaaagttagtccgacccttacctta 33002205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 46386140 - 46386087
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||||||||||||||||  ||||||| |||||    
T  46386140 tttcagaattatacaacttagaattagagaaagttagtcctacccttatcttag 46386087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 10277327 - 10277375
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  10277327 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 12557889 - 12557980
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattga 251  Q
    ||||| ||| ||||||| | ||||||||||| |||| ||||| | |  |||||||||||| ||| ||||||||||| |||| ||||| |||||    
T  12557889 caaaactacaacctacaacctgttaaattcaatttttagaatcatac-acttagaattagtgaaggttagtctcactcttatcttagaattga 12557980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 11093 - 11317
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  11093 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaatcaaaacctaatttctctaatcatcaa 11192  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||| |||||||||  |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11193 aattaccacctacattatgttaaatctagttttcagaattaaaatacttggaattagagaaagttagactcacccttaccttagtattgatgatcggcgg 11292  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  11293 tctctctccctcttggttctcctct 11317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 3e-88; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 72 - 272
Target Start/End: Original strand, 40620412 - 40620612
Alignment:
Q  72 gcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccacc 171  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  40620412 gcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccacc 40620511  T
Q  172 tacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccc 271  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  40620512 tacatcatgttaaatccaattttcagaattaaaatacttagaattagagaaagttattcccacccttaccttagtattgatgatcggcggtctctctccc 40620611  T
Q  272 t 272  Q
    |    
T  40620612 t 40620612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 10694427 - 10694245
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10694427 ttattctacagcctgaacttcaattcttatgttaattcattggattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 10694328  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10694327 aattaccacctacatcatgttaaatcgagttttcagaattaaattacttagaattagagaaatttagtctcacccttacctta 10694245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 10908193 - 10908011
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10908193 ttattctacagcctgaacttcaattcttatgttaattaattgaattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 10908094  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10908093 aattaccacctacatcatgttaaatcgagttttcagaattaaattacttagaattagagaaatttagtctcacccttacctta 10908011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 15008838 - 15009057
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| ||||||||||| |||||||||||||||||| || |||||| |||||||||||||||||||      ||||||||||||| |||||| ||||    
T  15008838 ttattctacagcctgaactttaattcttatgttaattcattgaattaccaactctttaacaatcaattc------aaaacctaatttctctaatcatcaa 15008931  T
Q  162 aattaccacctacatcatgttaaattcagtttt-cagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcg 260  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15008932 aattaccacctacatcatgttaaatccagtttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcg 15009031  T
Q  261 gtctctctccct-ttgcttctcctct 285  Q
    |||||||||||| ||| |||||||||    
T  15009032 gtctctctccctcttggttctcctct 15009057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 14186973 - 14187038
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  14186973 acttagaattagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctccct 14187038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 9924131 - 9924207
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  9924131 acctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcacccttaccttag 9924207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 10057648 - 10057741
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    ||||||||||||| | |||||||| | || ||| |||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10057648 catgttaaattca-tcttcagaatcacat-actcagaattattgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccct 10057741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 11478718 - 11478652
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |||||||||||| |  |||||||||||||| ||||||||||||||||||||||||    
T  11478718 tgttaaattcaattttcagaattataccacttagaattagaggaagttagtctcacccttaccttag 11478652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 21157 - 21249
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||| |||||||||||    
T  21157 aatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttaccttag 21249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 9870547 - 9870443
Alignment:
Q  141 cctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |||   ||||| ||| ||||||||||||| |||| || |||||||||||| |  |||||||||||  ||||||||||| ||||||||     
T  9870547 cctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatggaaagttagtcccacccttag 9870448  T
Q  241 cttag 245  Q
    |||||    
T  9870447 cttag 9870443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 2424424 - 2424386
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2424424 acttagaattagagaaagttagtctcacccttaccttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 14549775 - 14549813
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14549775 acttagaattagagaaagttagtctcacccttaccttag 14549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 19610324 - 19610376
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||| ||||||||||||||||||||||||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttacctta 19610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 21062602 - 21062694
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||  | |||||||| || |||||| | ||| |  |||||||||||||||||||||||| ||||||||||||||    
T  21062602 aatcctcaaaactacaacctaccacttgttaaatccaattttcatagttataacacttagaattagagaaagttagtcccacccttaccttag 21062694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 37019648 - 37019723
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| ||||||||| ||| ||| |||||||| |  ||||| |||||||||||||||||| ||||||||||||||    
T  37019648 acctacaacatgttaaactcaattt-cagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 19434596 - 19434558
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19434596 acttagaattagagaaagttagtcccacccttaccttag 19434558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 16998540 - 16998577
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||||||| |||||||||    
T  16998540 acttagaattagagaaagttagtctcactcttacctta 16998577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 35811413 - 35811376
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||| |||||||||||||    
T  35811413 acttagaattagagaaagttagtcccacccttacctta 35811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 10356488 - 10356436
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| || ||||||||||    
T  10356488 tttcagaattatacaacttagaattagagaaagttagtcccaaccttacctta 10356436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 46001583 - 46001535
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || |||||||||||||||||||||||||||||||    
T  46001583 tttcagaattatacaacgtagaattagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 15613069 - 15613143
Alignment:
Q  170 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| |||||||||| || ||| |||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  15613069 cctacaacatgttaaatccaattt-cagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 15613143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 51993540 - 51993614
Alignment:
Q  170 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| |||||||||| || ||| |||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  51993540 cctacaacatgttaaatccaattt-cagaattacacaacttagaattaaagaaggttagtcccacccttaccttag 51993614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 6633589 - 6633541
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  6633589 tttcagaattatacaacgtagaattagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 9622369 - 9622425
Alignment:
Q  74 ctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    |||||| ||| | |||| ||||||||| ||||||||||||||||| |||||||||||    
T  9622369 ctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaatt 9622425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 15011545 - 15011497
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaatta 217  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||    
T  15011545 acctacaacatgttaaatacaattttcagaattaaaacacttagaatta 15011497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 19022366 - 19022410
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||||||||||||||||||||| |||||||||  | |||||||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatgatcgg 19022410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 19243577 - 19243668
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||| |||||||||| || |||||||||| || | |||||  ||||  ||| ||||||| |||||||||||||| ||  |||||||||||    
T  19243577 acctacaacatgttaaatccaattttcagaatcaa-tgacttaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 19243668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 42875797 - 42875849
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||| | |||||||||| |||||||||||||    
T  42875797 tttcagaattatacaacttagaattatataaagttagtcccacccttacctta 42875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 157; Significance: 2e-83; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 62 - 285
Target Start/End: Original strand, 1807 - 2031
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||    
T  1807 ttattctacagcctgaacttcaattcttatgttaattcattgaattacctactctttaacaatcaattccaaaccaaaaaataatttctctaatcatcaa 1906  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||| ||    
T  1907 aattaccacctacatcatgttaaataccgttttcagaattaaaatacttagaattagataaagttagtcccaccctttccttagtattgatgatcggtgg 2006  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  2007 tctctctccctcttggttctcctct 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 5082 - 5044
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5082 acttagaattagagaaagttagtcccacccttaccttag 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 10792 - 10754
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10792 acttagaattagagaaagttagtcccacccttaccttag 10754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 62 - 285
Target Start/End: Complemental strand, 21959 - 21735
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||    
T  21959 ttattctacagcctgaacatcaattcttatgttaattcattgaattacctactctttaacaatcattttcaaaccaaaacctaatttctctaatcatcaa 21860  T
Q  162 aattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||    
T  21859 aattaccacctacatcatgttaaatccagttttcaaatttaaaatacttagaattagagaaagttagtcccatccttaccttagtattgatgatcggtgg 21760  T
Q  262 tctctctccct-ttgcttctcctct 285  Q
    ||||||||||| ||| |||||||||    
T  21759 tctctctccctcttggttctcctct 21735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 112 - 285
Target Start/End: Original strand, 6288 - 6462
Alignment:
Q  112 actctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattactta 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||    
T  6288 actctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaaaattaccacctacatcatgtcaaatccagttttcaaaattaaaatactta 6387  T
Q  212 gaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  6388 gaattagagaaagttagtcccacccttacattagtattgatgatcggcggtctctctccctcttggttctcctct 6462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 14768 - 14667
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| | |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14768 ttattctacaacctgaacttcaattcttatgttaatttattagattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 14669  T
Q  162 aa 163  Q
    ||    
T  14668 aa 14667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 23826 - 23725
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaattccaaaccaaaacctaatttccctaatcttcaa 161  Q
    |||||||| | |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  23826 ttattctacaacctgaacttcaattcttatgttaatttattagattacctactctttaacaatcaattccaaaccaaaacctaatttctctaatcatcaa 23727  T
Q  162 aa 163  Q
    ||    
T  23726 aa 23725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 1165 - 1259
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||| |  ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  1165 tttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttagtattgataatcggcggtctctctccctcttggttctcctct 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 5352 - 5460
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    ||||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| |||||||||||||| ||| |||||||||||||||||||||| |||    
T  5352 catgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttaccttagaattaatgatcggcggtctctctccctcttg 5450  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  5451 gttctcctct 5460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 15287 - 15352
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct 272  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  15287 acttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccct 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 110141 - 110222
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  110141 caaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaagttagtctcacccttac 110222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 328321 - 328287
Alignment:
Q  211 agaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||| ||||||||||||||    
T  328321 agaattagagaaagttagtcccacccttaccttag 328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 4784 - 4708
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  4784 acctacaacttgttaaattcaattttcagaattatactacttagaattagagaaagttagtcccacccttaccttag 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 9029 - 9139
Alignment:
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggc 259  Q
    |||| ||| ||||||| | |||||||| |||||| |||||||| || ||| |||||||  ||| ||||||| ||||||||||||||||||||||||||||    
T  9029 aaaactacaacctacaacctgttaaatccagttt-cagaattacat-actcagaattactgaaggttagtcccacccttaccttagtattgatgatcggc 9126  T
Q  260 ggtctctctccct 272  Q
    |||||||||||||    
T  9127 ggtctctctccct 9139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 12111 - 12178
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactctttaacaatcaatt 129  Q
    |||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  12111 ttattctacaacctgaacatcaattcttatgttaattcattgggttacctactctttaacaatcaatt 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 16572 - 16698
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||| ||| ||||||  |||||||||| |||||| |||||| | |  ||||||||||||| ||| |||||| |||||||  |||||||||||||||||     
T  16572 caaaactacaacctaccacatgttaaatccagttt-cagaatcatacaacttagaattagataaatttagtcccaccctttgcttagtattgatgatcgt 16670  T
Q  259 cggtctctctccct-ttgcttctcctct 285  Q
    |||||||||||||| ||| |||||||||    
T  16671 cggtctctctccctcttggttctcctct 16698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 245
Target Start/End: Original strand, 35362 - 35543
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaattccaaac-caaaacctaatttccctaatcttc 159  Q
    |||||||| | ||||||| |||||||||||||||||| | |||||||| ||| |||| ||||| ||||| | |   |||||||||||| ||| |||   |    
T  35362 ttattctacaacctgaacatcaattcttatgttaatttattggattacatacacttttaacaaccaattacgacttcaaaacctaatt-cccaaattccc 35460  T
Q  160 aaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| ||  ||||||| |||| |||| ||| ||| |||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  35461 aaaacta--acctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttag 35543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 1133 - 1044
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||| | ||||||||||| |||||||||||| |  ||||||||| |||||||||||||| ||||||||||||||  | |||||||||    
T  1133 acctacaacttgttaaattcaattttcagaattataacacttagaataagagaaagttagtcccacccttaccttagattagatgatcgg 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 14942 - 15051
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    |||||||||| || |||||||||||  |  ||||||||||| | ||  |||||| |||||| ||||||||||||||||||| |||||||||||||| |||    
T  14942 catgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttg 15041  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  15042 gttctcctct 15051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 16962 - 17071
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    |||||||||| || |||||||||||  |  ||||||||||| | ||  |||||| |||||| ||||||||||||||||||| |||||||||||||| |||    
T  16962 catgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttg 17061  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  17062 gttctcctct 17071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 19931 - 20007
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | |||||||| || |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  19931 acctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttaccttag 20007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 60856 - 60948
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||| |||||||||||    
T  60856 aatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttaccttag 60948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 113052 - 112965
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagtttt-cagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||| ||||||| | ||||||||||| |||| |||| ||| || |||||||||||||||||||||||| |||||||| |||||    
T  113052 caaaattacaacctacaacttgttaaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttatcttag 112965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 117873 - 117805
Alignment:
Q  179 tgttaaattcagtttt-cagaattaaattacttagaattagagaaagttagtctcacccttaccttagt 246  Q
    ||||||||||| |||| |||| ||| || |||||||||||||||||||||||| |||||||||||||||    
T  117873 tgttaaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttaccttagt 117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 61901 - 61834
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  61901 ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcgg 61834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 30631 - 30705
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| ||||||||||||||||||||    
T  30631 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 30705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 5329 - 5374
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctc 269  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  5329 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 12349 - 12394
Alignment:
Q  224 gttagtctcacccttaccttagtattgatgatcggcggtctctctc 269  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  12349 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 77687 - 77740
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 77740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 31994 - 32046
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 37301 - 37353
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 116 - 191
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  116 acctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 23556 - 23628
Alignment:
Q  214 attagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttgcttctcctct 285  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||    
T  23556 attagagaaagctagtcctacccttaccttagtattgatgatcggcagtctctttccctcttggttctcctct 23628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 79049 - 79101
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 17993 - 17926
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||||||||||| |  |||||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  17993 ttttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 17926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 13501 - 13416
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||||||||||||||||||   ||||||||||  ||| ||||||| ||||||||||||||    
T  13501 caaaactacaacctacaacttgttaaattcagttttcagaattaaa-cccttagaattattgaaggttagtcccacccttaccttag 13416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 533 - 571
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  533 acttagaattagagaaagttagtctcacccttaccttag 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 135588 - 135503
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | ||||||||||| |||||||||||| |  |||||||||||| ||| ||||||| ||||||||||||||    
T  135588 caaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaaggttagtcccacccttaccttag 135503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 11311 - 11274
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11311 acttagaattagagaaagttagtctcacccttacctta 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 13624 - 13731
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccct-ttg 275  Q
    ||||||||||||| | |||||||| | || |||||||||||  ||| |||| || |||||||||| ||||||||||| || ||||||||||||||| |||    
T  13624 catgttaaattca-tcttcagaatcacat-acttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctgttg 13721  T
Q  276 cttctcctct 285  Q
     |||||||||    
T  13722 gttctcctct 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 770 - 695
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| ||||||||| ||| ||| |||||||| |  |||||||||||||||||||||||| ||||| ||||||||    
T  770 acctacaacatgttaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccctaccttag 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 4346 - 4438
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| |||||||||| ||||| ||||||||| |  ||||||||||| |||| ||||||| || | |||||||||    
T  4346 aatcctcaaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaagaaggttagtcccatcgttaccttag 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 8592 - 8695
Alignment:
Q  141 cctaatttccctaatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttac 240  Q
    ||||||||||| |||   ||||| ||| ||||||| | ||||||||||| |||||||||| | |  |||||||||||| ||| ||||||| |||||||||    
T  8592 cctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccacccttac 8690  T
Q  241 cttag 245  Q
    |||||    
T  8691 cttag 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 34339 - 34391
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||  | |||||||||||||||||||||| |||||||||||||    
T  34339 tttcagaattaaacaaattagaattagagaaagttagtcccacccttacctta 34391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 5929 - 6003
Alignment:
Q  170 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||| ||||||||||||| ||| |||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  5929 cctacaacatgttaaattcaattt-cagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 169051 - 168998
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||| ||||||||    
T  169051 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttag 168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 30048 - 30122
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || ||||||||||||||  ||||||| |||  ||| ||||||| ||||||||||||    
T  30048 acctacaacatgttaaatacaattttcagaattaaaacacttagatttattgaaggttagtcccacccttacctt 30122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 10 - 65
Alignment:
Q  75 tgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaatt 129  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  10 tgaacatcaattcttatgttaattctttggattacctactctttcaacaatcaatt 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 58761 - 58812
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    |||||||||||||||||||||||| ||||||||||||| | | |||||||||    
T  58761 acttagaattagagaaagttagtcccacccttaccttaatttagatgatcgg 58812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 27954 - 28029
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| |||||||||||||    
T  27954 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctta 28029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 42812 - 42887
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| |||||||||||||    
T  42812 acctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctta 42887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 2253 - 2199
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  ||||||||||||||||| |||||| ||||||||||||||    
T  2253 ttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 2555 - 2621
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 258  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||| |||  | |||||||||    
T  2555 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcgg 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 1478 - 1520
Alignment:
Q  232 cacccttaccttagtattgatgatcggcggtctctctcccttt 274  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  1478 cacccttaccttagtattgatgatcggcggcctgtctcccttt 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 5914 - 5860
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  ||||||||||||||||||||||| ||||| |||||||||    
T  5914 ttttcagaattataacacttagaattagagaaagttagtatcacctttaccttag 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 19768 - 19806
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19768 acttagaattagagaaagtcagtctcacccttaccttag 19806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 19206 - 19260
Alignment:
Q  191 ttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||| |  |||||||||||||||||||||||| ||||||||| ||||    
T  19206 ttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 13476 - 13391
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| |||| |||| ||| ||| |||||||| |  |||| ||||||||||||||||||| ||||||||||||||    
T  13476 caaaactacaacctacaacatgctaaactcaattt-cagaattatacaacttggaattagagaaagttagtcccacccttaccttag 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 67108 - 67174
Alignment:
Q  179 tgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||| || |||||||||||| |  |||| ||||||||||||||||||| |||| |||||||||    
T  67108 tgttaaatccaattttcagaattataccacttcgaattagagaaagttagtcccacctttaccttag 67174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 106088 - 106050
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  106088 acttagaattagagaaagttagtcacacccttaccttag 106050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 16977 - 17043
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||| |||| |||||||| ||||||||||||||||| |||||||||    
T  16977 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaa 17043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 26508 - 26574
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||| |||| |||||||| ||||||||||||||||| |||||||||    
T  26508 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaa 26574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 233 - 196
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacctta 244  Q
    |||||||||||||||||||||||| |||||||||||||    
T  233 acttagaattagagaaagttagtcccacccttacctta 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 1913 - 1845
Alignment:
Q  177 catgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagt 246  Q
    ||||||||||||| ||| |||||||| |  |||||||||||||||||||||||| |||||  ||||||||    
T  1913 catgttaaattcaattt-cagaattataccacttagaattagagaaagttagtcccacccacaccttagt 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 3182 - 3235
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||||||||||||||||  |||||||||||||    
T  3182 tttcagaattatacaacttagaattagagaaagttagtccaacccttaccttag 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 29625 - 29572
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  ||||||||||| |||||||||||| ||||||||||||||    
T  29625 tttcagaattatacaacttagaattatagaaagttagtcccacccttaccttag 29572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 21626 - 21664
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  21626 acttagaattagagaaagctagtcccacccttaccttag 21664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 5383 - 5432
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacc 241  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  5383 tttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 12585 - 12534
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||||||| |  ||||||||||||||||||||| || ||||||||||||    
T  12585 tttcagaattatacaacttagaattagagaaagttattcccacccttacctt 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 43911 - 43866
Alignment:
Q  119 aacaatcaattccaaaccaaaacctaatttccctaatcttcaaaat 164  Q
    |||||||||||||||| |||||||||||||| |||||| |||||||    
T  43911 aacaatcaattccaaatcaaaacctaatttctctaatcatcaaaat 43866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 39245 - 39184
Alignment:
Q  94 taattcactggattacctactcttt-aacaatcaattccaaaccaaaacctaatttccctaa 154  Q
    ||||||| || |||| ||||| ||| |||||||||||||||| |||||||||||||| ||||    
T  39245 taattcattgaattatctactttttcaacaatcaattccaaatcaaaacctaatttctctaa 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 4766 - 4714
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||||||| |  ||||||||||||||||||||||||  ||||||||||||    
T  4766 tttcagaattatacaacttagaattagagaaagttagtccgacccttacctta 4714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 4901 - 4993
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| |||  |||||| |||||||||| ||  | ||||||||| |  ||||||||||| |||| ||||||| ||||||||||||||    
T  4901 aatcctcaaaactacatcctacaacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 4993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 20160 - 20085
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | ||||||||||| |||||||||||| |  |||||||||||| ||| ||||||| | ||||||||||||    
T  20160 acctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaaggttagtcccgcccttaccttag 20085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 7254 - 7330
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| ||||| |||| || |||||||||||| |  ||||||||||| |||| ||||||| |||||| |||||||    
T  7254 acctacaacatgtcaaatccaattttcagaattatacaacttagaattaaagaatgttagtcccaccctcaccttag 7330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 398523 - 398615
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| |||  |||||| |||||||||| || || ||||||||| |  || |||||||| |||| ||||||| ||||||||||||||    
T  398523 aatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccacccttaccttag 398615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 6819 - 6893
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctta 244  Q
    ||||||| |||||||||| || ||||||||||| ||| |||||  ||||  ||| |||||||||||||||||||||    
T  6819 acctacaacatgttaaatccaattttcagaatt-aatgacttaagattattgaatgttagtctcacccttacctta 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 7535 - 7606
Alignment:
Q  172 tacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    |||| |||||||||| || ||||||||||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  7535 tacaacatgttaaatacatttttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 7606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 5759 - 5712
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcaccctta 239  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||    
T  5759 tttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 5342 - 5304
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  5342 acttaaaattagagaaagttagtcccacccttaccttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 6722 - 6688
Alignment:
Q  207 acttagaattagagaaagttagtctcacccttacc 241  Q
    |||||||||||||||||||||||| ||||||||||    
T  6722 acttagaattagagaaagttagtcccacccttacc 6688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 6976 - 6910
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||||||||||||||||| || ||||| ||| |||| |||||||||    
T  6976 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaa 6910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 28584 - 28650
Alignment:
Q  62 ttattctatagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 127  Q
    |||||||| | ||||||| |||||| ||||||||||||| | |||||||||| |||| |||||||||    
T  28584 ttattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaatcaa 28650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 29355 - 29441
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||| ||| ||||||| | |||||||| || |||||||||| | |  ||||||||||| ||||  |||||| ||||||||||||||    
T  29355 caaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaagattagtcccacccttaccttag 29441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 21672 - 21746
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||||| |||||||||| || |||||| |||||||  |||||||||||  ||| | ||||| ||||||||||||    
T  21672 acctacaacatgttaaatacaattttcaaaattaaaacacttagaattattgaaggctagtcccacccttacctt 21746  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 146723 - 146776
Alignment:
Q  192 tttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||||||| |  |||||||||||||| ||||||||| ||||| ||||||||    
T  146723 tttcagaattatacaacttagaattagagtaagttagtcccacccataccttag 146776  T

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Target: scaffold1521 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 861 - 889
Alignment:
Q  36 acattagcaagtatggggaagtgccctta 64  Q
    |||||||||||||||||||||||||||||    
T  861 acattagcaagtatggggaagtgccctta 889  T

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Target: scaffold0452 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 12697 - 12649
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaatta 217  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||    
T  12697 acctacaacatgttaaatacaattttcagaattaaaacacttagaatta 12649  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 21625 - 21716
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcgg 261  Q
    ||||||| |||||||||| || |||||||||| || | |||||  ||||  ||| ||||||| |||||||||||||| ||  |||||||||||    
T  21625 acctacaacatgttaaatccaattttcagaatcaa-tgacttaagattattgaatgttagtcccacccttaccttagaatgaatgatcggcgg 21716  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 29858 - 29830
Alignment:
Q  36 acattagcaagtatggggaagtgccctta 64  Q
    |||||||||||||||||||||||||||||    
T  29858 acattagcaagtatggggaagtgccctta 29830  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 31086 - 31161
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    ||||||| | |||||||| || |||||||||||| || ||| |||||||  ||| ||||||| ||||||||||||||    
T  31086 acctacaacttgttaaatccaattttcagaattacat-actcagaattattgaaggttagtcccacccttaccttag 31161  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 22075 - 22123
Alignment:
Q  169 acctacatcatgttaaattcagttttcagaattaaattacttagaatta 217  Q
    ||||||| |||||||||| || ||||||||||||||  |||||||||||    
T  22075 acctacaacatgttaaatacaattttcagaattaaaacacttagaatta 22123  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 52635 - 52543
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| |||  |||||| |||||||||| || || ||||||||| |  |||||||||||  ||| ||||||| |||||||| |||||    
T  52635 aatcctcaaaactacatcctacaacatgttaaatccaattctcagaattacacaacttagaattaatgaaggttagtcccacccttatcttag 52543  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 3136 - 3053
Alignment:
Q  159 caaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttacctt 243  Q
    ||||| ||| ||||||| | ||||||||||| ||||||||| |||   |||||||||||  ||| ||||||| ||||||||||||    
T  3136 caaaactacaacctacaacttgttaaattcaattttcagaa-taatacacttagaattattgaaggttagtcccacccttacctt 3053  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 96360 - 96451
Alignment:
Q  153 aatcttcaaaattaccacctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtctcacccttaccttag 245  Q
    |||| |||||| ||| ||||||| | |||||||| || |||||||||| | |  ||| |||||||||||||||||||| |||| |||| ||||    
T  96360 aatcctcaaaactacaacctacaacttgttaaatcca-ttttcagaatcatacaactcagaattagagaaagttagtcccacctttactttag 96451  T

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