View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10751_high_28 (Length: 201)

Name: NF10751_high_28
Description: NF10751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10751_high_28
NF10751_high_28
[»] chr4 (53 HSPs)
chr4 (3-184)||(5268857-5269040)
chr4 (3-184)||(36314887-36315070)
chr4 (3-184)||(36329096-36329279)
chr4 (3-184)||(8689154-8689336)
chr4 (3-184)||(54867436-54867619)
chr4 (3-184)||(25861690-25861873)
chr4 (3-184)||(16622951-16623133)
chr4 (3-184)||(3777806-3777988)
chr4 (3-184)||(6743072-6743255)
chr4 (3-176)||(10047638-10047808)
chr4 (3-184)||(16628530-16628712)
chr4 (1-182)||(5143515-5143698)
chr4 (4-184)||(5147936-5148117)
chr4 (55-176)||(26175915-26176035)
chr4 (3-140)||(5396372-5396511)
chr4 (55-184)||(37740387-37740515)
chr4 (55-184)||(34570693-34570821)
chr4 (55-179)||(29254260-29254383)
chr4 (28-176)||(12739801-12739949)
chr4 (28-176)||(12748007-12748155)
chr4 (55-184)||(5429441-5429568)
chr4 (3-184)||(38152095-38152278)
chr4 (3-184)||(31985292-31985473)
chr4 (55-176)||(35661978-35662098)
chr4 (28-184)||(54200157-54200313)
chr4 (55-185)||(30000084-30000213)
chr4 (55-140)||(12745715-12745799)
chr4 (55-183)||(52082936-52083063)
chr4 (55-183)||(52093943-52094070)
chr4 (55-181)||(9927736-9927865)
chr4 (55-184)||(52095641-52095767)
chr4 (55-176)||(56178915-56179035)
chr4 (56-176)||(5370366-5370486)
chr4 (55-176)||(48142810-48142931)
chr4 (5-111)||(42599305-42599412)
chr4 (46-176)||(18377655-18377785)
chr4 (3-70)||(28468305-28468374)
chr4 (55-183)||(13992565-13992692)
chr4 (28-113)||(39774032-39774118)
chr4 (3-79)||(5112494-5112573)
chr4 (126-184)||(6655499-6655557)
chr4 (126-184)||(27417518-27417576)
chr4 (4-69)||(24334071-24334139)
chr4 (126-183)||(26363809-26363866)
chr4 (54-95)||(36994374-36994415)
chr4 (148-184)||(5396348-5396384)
chr4 (148-184)||(12745787-12745823)
chr4 (148-184)||(50674435-50674471)
chr4 (3-70)||(1983070-1983140)
chr4 (122-184)||(3909857-3909919)
chr4 (126-184)||(40630527-40630585)
chr4 (3-69)||(51336938-51337007)
chr4 (148-184)||(36994321-36994357)
[»] chr6 (31 HSPs)
chr6 (3-184)||(18234340-18234523)
chr6 (7-184)||(10076848-10077027)
chr6 (5-184)||(31086130-31086312)
chr6 (3-184)||(5017153-5017336)
chr6 (1-184)||(22963954-22964138)
chr6 (1-184)||(23824255-23824439)
chr6 (3-183)||(21272647-21272829)
chr6 (4-184)||(24435629-24435810)
chr6 (3-184)||(5757136-5757318)
chr6 (3-140)||(5571945-5572083)
chr6 (3-184)||(31979769-31979957)
chr6 (55-184)||(5407187-5407315)
chr6 (28-140)||(23896636-23896748)
chr6 (55-184)||(5406477-5406605)
chr6 (55-184)||(5410802-5410930)
chr6 (55-184)||(5411512-5411640)
chr6 (55-184)||(31404953-31405081)
chr6 (55-184)||(33211464-33211592)
chr6 (56-184)||(30834816-30834944)
chr6 (55-184)||(16452608-16452736)
chr6 (60-184)||(33160638-33160761)
chr6 (3-111)||(31936832-31936942)
chr6 (55-140)||(9183310-9183393)
chr6 (55-143)||(5413671-5413757)
chr6 (3-79)||(22709267-22709345)
chr6 (97-184)||(16452760-16452847)
chr6 (122-184)||(26954648-26954710)
chr6 (148-184)||(5571921-5571957)
chr6 (102-178)||(24714730-24714806)
chr6 (126-184)||(21593209-21593267)
chr6 (4-69)||(21801113-21801181)
[»] chr2 (41 HSPs)
chr2 (3-184)||(33528281-33528464)
chr2 (3-184)||(33118392-33118575)
chr2 (3-184)||(34389108-34389290)
chr2 (3-184)||(21630202-21630385)
chr2 (3-184)||(20522479-20522662)
chr2 (6-184)||(14698666-14698846)
chr2 (3-184)||(10706910-10707092)
chr2 (3-184)||(28258835-28259017)
chr2 (3-184)||(8389806-8389989)
chr2 (3-180)||(23078133-23078311)
chr2 (3-184)||(13569586-13569770)
chr2 (3-140)||(36757463-36757602)
chr2 (55-184)||(2837123-2837251)
chr2 (55-176)||(39284654-39284774)
chr2 (55-184)||(2334696-2334824)
chr2 (55-184)||(36318288-36318416)
chr2 (3-129)||(17865462-17865589)
chr2 (55-184)||(5723533-5723661)
chr2 (55-184)||(36988354-36988482)
chr2 (55-140)||(38312045-38312129)
chr2 (57-172)||(29867641-29867756)
chr2 (103-184)||(39483235-39483316)
chr2 (57-175)||(6595287-6595404)
chr2 (55-184)||(45099516-45099644)
chr2 (3-184)||(3492011-3492191)
chr2 (60-140)||(17057653-17057732)
chr2 (60-140)||(17085636-17085715)
chr2 (55-184)||(4503411-4503539)
chr2 (3-184)||(40739091-40739271)
chr2 (55-184)||(36205942-36206072)
chr2 (3-130)||(40015182-40015311)
chr2 (6-70)||(10445238-10445304)
chr2 (3-184)||(25409890-25410080)
chr2 (3-88)||(15903642-15903730)
chr2 (126-184)||(35447451-35447508)
chr2 (55-184)||(4484610-4484737)
chr2 (55-184)||(30833107-30833234)
chr2 (4-69)||(34682102-34682170)
chr2 (4-69)||(31056303-31056371)
chr2 (4-69)||(42269629-42269697)
chr2 (156-184)||(17865589-17865617)
[»] scaffold0006 (3 HSPs)
scaffold0006 (3-184)||(2751-2933)
scaffold0006 (3-184)||(5942-6125)
scaffold0006 (3-184)||(132937-133119)
[»] chr3 (65 HSPs)
chr3 (3-184)||(1735950-1736133)
chr3 (3-184)||(24694812-24694995)
chr3 (3-184)||(40592428-40592611)
chr3 (3-184)||(8370136-8370318)
chr3 (3-184)||(36029350-36029533)
chr3 (3-184)||(47923550-47923733)
chr3 (3-184)||(48438472-48438655)
chr3 (3-184)||(39032202-39032383)
chr3 (28-183)||(30709444-30709599)
chr3 (1-184)||(27026961-27027145)
chr3 (3-184)||(16264606-16264788)
chr3 (3-180)||(8126887-8127066)
chr3 (3-184)||(27974599-27974781)
chr3 (54-184)||(40734259-40734388)
chr3 (3-184)||(27038308-27038481)
chr3 (3-184)||(40844912-40845093)
chr3 (55-184)||(29812824-29812952)
chr3 (4-184)||(25929042-25929224)
chr3 (3-184)||(37725932-37726114)
chr3 (3-180)||(33386326-33386504)
chr3 (3-140)||(21711479-21711617)
chr3 (3-143)||(35925735-35925879)
chr3 (55-184)||(29810629-29810757)
chr3 (55-176)||(51398583-51398703)
chr3 (55-184)||(5236735-5236864)
chr3 (3-184)||(27453217-27453396)
chr3 (3-184)||(23410554-23410737)
chr3 (3-140)||(27986147-27986285)
chr3 (3-184)||(32143580-32143761)
chr3 (64-184)||(44331735-44331854)
chr3 (62-184)||(7762025-7762146)
chr3 (55-184)||(45094925-45095054)
chr3 (55-184)||(37408220-37408348)
chr3 (115-184)||(40735190-40735259)
chr3 (3-140)||(26928290-26928428)
chr3 (55-184)||(5260602-5260730)
chr3 (4-111)||(6794434-6794543)
chr3 (56-143)||(5258424-5258509)
chr3 (3-85)||(26299245-26299329)
chr3 (55-184)||(9636406-9636535)
chr3 (55-142)||(44331360-44331444)
chr3 (75-184)||(7764213-7764321)
chr3 (54-184)||(23198216-23198344)
chr3 (55-184)||(23200416-23200543)
chr3 (3-167)||(23392134-23392300)
chr3 (5-91)||(37466554-37466642)
chr3 (127-184)||(43404301-43404358)
chr3 (148-184)||(21711605-21711641)
chr3 (3-79)||(3328108-3328186)
chr3 (3-70)||(1306209-1306278)
chr3 (3-70)||(1417251-1417320)
chr3 (3-70)||(3323451-3323520)
chr3 (126-184)||(4569494-4569552)
chr3 (126-184)||(55302532-55302590)
chr3 (4-69)||(3715760-3715828)
chr3 (148-184)||(34490775-34490811)
chr3 (3-70)||(4386736-4386806)
chr3 (126-184)||(6096167-6096225)
chr3 (126-176)||(36018401-36018451)
chr3 (126-184)||(54593247-54593305)
chr3 (4-69)||(25796040-25796108)
chr3 (151-184)||(46173276-46173309)
chr3 (148-184)||(31340631-31340667)
chr3 (148-180)||(43402379-43402411)
chr3 (148-184)||(49200040-49200076)
[»] chr1 (46 HSPs)
chr1 (3-184)||(13598657-13598840)
chr1 (3-184)||(29652070-29652253)
chr1 (5-184)||(21536228-21536408)
chr1 (3-183)||(3281964-3282145)
chr1 (3-184)||(37070024-37070207)
chr1 (55-183)||(49918111-49918238)
chr1 (3-184)||(13604280-13604462)
chr1 (55-182)||(30476727-30476853)
chr1 (55-184)||(28220505-28220633)
chr1 (28-183)||(10924985-10925140)
chr1 (3-178)||(26644561-26644738)
chr1 (55-184)||(28223700-28223828)
chr1 (55-184)||(31658999-31659127)
chr1 (55-183)||(1833284-1833411)
chr1 (55-183)||(3206749-3206876)
chr1 (55-143)||(37503833-37503920)
chr1 (55-184)||(13316597-13316725)
chr1 (55-176)||(3156635-3156755)
chr1 (55-184)||(44454920-44455049)
chr1 (3-111)||(47102569-47102679)
chr1 (3-111)||(47098555-47098665)
chr1 (81-175)||(4552952-4553046)
chr1 (55-184)||(20762433-20762561)
chr1 (12-111)||(32889704-32889805)
chr1 (3-173)||(19365965-19366144)
chr1 (55-140)||(3189137-3189220)
chr1 (55-140)||(3197954-3198037)
chr1 (3-92)||(9022655-9022746)
chr1 (55-184)||(46064679-46064807)
chr1 (56-119)||(37560149-37560211)
chr1 (5-70)||(9476521-9476588)
chr1 (3-140)||(19358533-19358680)
chr1 (3-140)||(19361122-19361269)
chr1 (3-79)||(27104164-27104241)
chr1 (3-184)||(22819688-22819870)
chr1 (126-184)||(193155-193213)
chr1 (3-70)||(24202536-24202605)
chr1 (126-184)||(37033636-37033694)
chr1 (127-184)||(13547657-13547714)
chr1 (127-184)||(13549568-13549625)
chr1 (4-69)||(47703704-47703772)
chr1 (148-184)||(29135811-29135847)
chr1 (127-184)||(16455407-16455464)
chr1 (4-69)||(19073188-19073256)
chr1 (4-69)||(19121078-19121146)
chr1 (4-69)||(40816585-40816653)
[»] chr8 (38 HSPs)
chr8 (3-184)||(23799233-23799416)
chr8 (3-184)||(5702137-5702320)
chr8 (3-176)||(7412597-7412771)
chr8 (3-144)||(4696305-4696448)
chr8 (3-135)||(4456285-4456419)
chr8 (55-184)||(15212547-15212675)
chr8 (55-184)||(30143103-30143231)
chr8 (55-184)||(43036184-43036312)
chr8 (1-143)||(19175449-19175596)
chr8 (28-184)||(33351911-33352067)
chr8 (55-184)||(34254607-34254735)
chr8 (55-184)||(12702917-12703046)
chr8 (55-184)||(17982414-17982542)
chr8 (28-184)||(4731419-4731575)
chr8 (55-184)||(19948600-19948728)
chr8 (55-184)||(34256783-34256911)
chr8 (55-184)||(1746497-1746625)
chr8 (55-184)||(31218018-31218146)
chr8 (55-144)||(27811079-27811167)
chr8 (4-184)||(3051378-3051561)
chr8 (55-140)||(42498000-42498083)
chr8 (55-140)||(19945639-19945722)
chr8 (56-184)||(44303615-44303742)
chr8 (62-140)||(4733610-4733689)
chr8 (82-184)||(4743498-4743600)
chr8 (81-184)||(10014920-10015023)
chr8 (4-140)||(26288152-26288288)
chr8 (4-140)||(26301409-26301545)
chr8 (4-140)||(26313403-26313539)
chr8 (3-87)||(19752148-19752234)
chr8 (17-88)||(28307833-28307907)
chr8 (3-70)||(1261721-1261790)
chr8 (3-88)||(5990315-5990401)
chr8 (126-184)||(42435558-42435616)
chr8 (143-184)||(4733586-4733627)
chr8 (148-181)||(40221310-40221343)
chr8 (122-182)||(1345714-1345774)
chr8 (42-70)||(36979681-36979709)
[»] chr5 (42 HSPs)
chr5 (3-184)||(14520487-14520669)
chr5 (3-184)||(11916629-11916812)
chr5 (3-184)||(12083835-12084017)
chr5 (56-184)||(19806167-19806294)
chr5 (55-184)||(42426514-42426642)
chr5 (3-184)||(9352992-9353172)
chr5 (55-184)||(13487964-13488092)
chr5 (55-176)||(42428709-42428829)
chr5 (56-184)||(32636585-32636712)
chr5 (55-176)||(533538-533658)
chr5 (3-176)||(15464791-15464965)
chr5 (3-183)||(11181488-11181672)
chr5 (57-184)||(13239513-13239639)
chr5 (55-143)||(28750934-28751022)
chr5 (3-184)||(36932007-36932188)
chr5 (54-184)||(37438907-37439038)
chr5 (55-176)||(30683199-30683319)
chr5 (55-184)||(13342822-13342950)
chr5 (55-184)||(25412523-25412651)
chr5 (55-184)||(36074323-36074451)
chr5 (55-184)||(30182349-30182478)
chr5 (3-111)||(17003689-17003799)
chr5 (82-184)||(16649928-16650030)
chr5 (67-144)||(535684-535760)
chr5 (3-95)||(31300341-31300435)
chr5 (127-184)||(31004811-31004868)
chr5 (3-111)||(24553256-24553367)
chr5 (113-184)||(16650958-16651029)
chr5 (3-70)||(28832514-28832583)
chr5 (3-70)||(38219659-38219728)
chr5 (126-184)||(27015075-27015133)
chr5 (3-88)||(42127123-42127210)
chr5 (1-79)||(7160665-7160746)
chr5 (4-69)||(10282012-10282080)
chr5 (126-184)||(5057592-5057650)
chr5 (3-70)||(35387923-35387992)
chr5 (126-184)||(38746548-38746606)
chr5 (55-89)||(39468828-39468862)
chr5 (143-184)||(535664-535705)
chr5 (122-162)||(34843011-34843052)
chr5 (55-155)||(42926682-42926782)
chr5 (148-184)||(40146822-40146858)
[»] scaffold0087 (2 HSPs)
scaffold0087 (3-184)||(36490-36672)
scaffold0087 (3-184)||(43619-43801)
[»] chr7 (54 HSPs)
chr7 (3-184)||(2647354-2647537)
chr7 (3-184)||(21989165-21989347)
chr7 (4-182)||(46515967-46516144)
chr7 (3-184)||(49091946-49092130)
chr7 (3-184)||(33332107-33332290)
chr7 (3-184)||(4796326-4796508)
chr7 (55-184)||(2761581-2761709)
chr7 (3-184)||(44847783-44847965)
chr7 (3-184)||(79645-79829)
chr7 (3-184)||(2479593-2479775)
chr7 (55-184)||(18126405-18126533)
chr7 (55-184)||(47676415-47676543)
chr7 (55-184)||(14070112-14070240)
chr7 (55-184)||(14380140-14380268)
chr7 (55-184)||(47674222-47674350)
chr7 (55-184)||(23554801-23554929)
chr7 (55-184)||(1113417-1113546)
chr7 (55-184)||(4585922-4586050)
chr7 (30-184)||(21983541-21983682)
chr7 (55-159)||(30025011-30025114)
chr7 (66-184)||(26417074-26417196)
chr7 (57-184)||(35853674-35853802)
chr7 (55-183)||(48489192-48489320)
chr7 (56-184)||(48491339-48491467)
chr7 (81-184)||(4538855-4538958)
chr7 (55-184)||(24515039-24515167)
chr7 (55-184)||(29990816-29990944)
chr7 (56-184)||(4178536-4178663)
chr7 (56-176)||(31733249-31733361)
chr7 (3-92)||(3047511-3047603)
chr7 (3-111)||(20284346-20284456)
chr7 (55-144)||(43864042-43864133)
chr7 (68-129)||(2759071-2759131)
chr7 (3-95)||(2580647-2580740)
chr7 (3-184)||(18409023-18409213)
chr7 (3-70)||(23402784-23402853)
chr7 (5-75)||(47263925-47263997)
chr7 (3-184)||(18413899-18414089)
chr7 (97-180)||(47263996-47264078)
chr7 (67-184)||(6570354-6570471)
chr7 (3-70)||(21640069-21640138)
chr7 (56-173)||(25767234-25767349)
chr7 (123-184)||(27347684-27347745)
chr7 (105-184)||(19495732-19495811)
chr7 (3-70)||(21646267-21646336)
chr7 (122-183)||(496339-496400)
chr7 (99-131)||(2759009-2759041)
chr7 (126-184)||(3050492-3050550)
chr7 (126-180)||(6360479-6360533)
chr7 (56-110)||(19502013-19502066)
chr7 (126-184)||(32358403-32358461)
chr7 (122-163)||(4512952-4512993)
chr7 (55-140)||(48408608-48408691)
chr7 (3-70)||(9189777-9189847)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-143)||(85940-86082)
[»] scaffold0098 (1 HSPs)
scaffold0098 (3-184)||(45455-45638)
[»] scaffold0066 (1 HSPs)
scaffold0066 (28-184)||(20666-20822)
[»] scaffold0140 (1 HSPs)
scaffold0140 (3-184)||(8075-8257)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-144)||(17506-17651)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-184)||(434294-434422)
[»] scaffold0491 (3 HSPs)
scaffold0491 (55-184)||(11441-11568)
scaffold0491 (55-140)||(9015-9099)
scaffold0491 (148-184)||(9087-9123)
[»] scaffold0016 (1 HSPs)
scaffold0016 (28-184)||(114347-114507)
[»] scaffold0188 (2 HSPs)
scaffold0188 (3-140)||(17641-17788)
scaffold0188 (3-70)||(23812-23881)
[»] scaffold0014 (1 HSPs)
scaffold0014 (126-184)||(80850-80908)
[»] scaffold0286 (1 HSPs)
scaffold0286 (126-184)||(11101-11159)
[»] scaffold1519 (1 HSPs)
scaffold1519 (72-184)||(668-779)
[»] scaffold0148 (1 HSPs)
scaffold0148 (4-69)||(10991-11059)
[»] scaffold0466 (1 HSPs)
scaffold0466 (148-184)||(6870-6906)


Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 5269040 - 5268857
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  5269040 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 5268941  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5268940 cacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 5268857  T

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Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 36315070 - 36314887
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||    
T  36315070 ccaagagatcctctctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaa 36314971  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36314970 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 36314887  T

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Target: chr4; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 36329279 - 36329096
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||    
T  36329279 ccaagagatcctctctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctcttcaagctctccttcaaaatctgcacaagaa 36329180  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36329179 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 36329096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 8689336 - 8689154
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||    
T  8689336 ccaagagatcctcactacaaagacactaaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaa 8689237  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  8689236 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcgtggcacgattggtgcgtacgacccaaggtac 8689154  T

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Target: chr4; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 54867436 - 54867619
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||||  ||||    
T  54867436 ccaagagattctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctcctccaaaatctgcacaagaa 54867535  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  54867536 cacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtac 54867619  T

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Target: chr4; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 25861873 - 25861690
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||   ||    
T  25861873 ccaagagatcctcactacaaagacactcaaccctaaagttaccttctttgtaatccaagtttctctctctaaaagctctccttcaaaatctgcaaagaaa 25861774  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25861773 cacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaaggtac 25861690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 16623133 - 16622951
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||  | ||    
T  16623133 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttctagctctccttcaaaatctgcacaaaaa 16623034  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16623033 cacttatatagcagccttcacctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgacccaaggtac 16622951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 3777806 - 3777988
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||  ||||    
T  3777806 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcaccttcaaaatctgcacaagaa 3777905  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||||||||||||||||||||||||||||| ||||| |||| || ||| |||| ||||||||||||||||||||||||||||    
T  3777906 catttatatagcagtcttcagctgtcaaaatcatgtcaagttt-tccaaaacgtggcacgattggtgcgtacgacccaaggtac 3777988  T

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Target: chr4; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 6743255 - 6743072
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||| ||||||||||||  || ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  6743255 ccaagagatcctcgctacaaagacactcaaacctcaagttacctcctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcacaagaa 6743156  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||| |||||||||| |||||| ||||  | |||||||||||||||| ||||||||| ||||||||||    
T  6743155 cacttatatagcagtcttcaactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaaggtac 6743072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 10047638 - 10047808
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  10047638 ccaagagatcctcattacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 10047737  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    |||||||     |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10047738 cacttat-----agtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacc 10047808  T

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Target: chr4; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 16628712 - 16628530
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||| ||||||| ||||||||||||| |||||| |||||||||||| |  | ||    
T  16628712 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaattttctctctcttctagctctccttcaaaatctgaacaaaaa 16628613  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16628612 cacttatatagcagccttcatctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgacccaaggtac 16628530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 5143515 - 5143698
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag 98  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||| || ||||||||||||||||||  ||||||||||| ||||||||||||||  ||    
T  5143515 atccaagagatcctcactacaaagacactcaaccctaaagttacctcctctgtaatccaagtttctcttacttcaagctctccttcaaaatctgcacaag 5143614  T
Q  99 aacacttatatagcagtcttcagctg-tcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggt 182  Q
    |||||||||||||||||||||||  | | ||||||||||||||||| || |||||||||||||||||||||| || |||||||||    
T  5143615 aacacttatatagcagtcttcagtagataaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgcacaacccaaggt 5143698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 5147936 - 5148117
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    ||||||||||| |||||||||||||  |||||||||| ||||| || |||||||||||||||||||  |||||||||| ||||||||||||||  |||||    
T  5147936 caagagatccttactacaaagacactaaaccctaaagttacctcctgtgtaatccaagtttctctcatttcaagctctccttcaaaatctgcacaagaac 5148035  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||| | |||  || |||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  5148036 acttatatagcagtcttaaactgataagatcgtgtcacgttt-tgcaaatcgtgacacgattggtgcgtacgacccaaggtac 5148117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 26175915 - 26176035
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |    
T  26175915 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgctaaatcat 26176013  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||||||||||||    
T  26176014 gacacgtttggtgcgtacgacc 26176035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 5396511 - 5396372
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||||| |||||| |||||||||||||   ||||    
T  5396511 ccaagagatcctcactacaaagacactcaaccctaaagtaacctcctttgtaatccaagtttctctctcttccagctctccttcaaaatctgctcaagaa 5396412  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  5396411 cacttatatagcagtcttcagctgtcaaaatcgtggcacg 5396372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 37740515 - 37740387
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  37740515 ccaagtttctctctcttcatgctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 37740417  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||  |||||| ||||||||||||||||    
T  37740416 gacacatttggtgtgtacgacccaaggtac 37740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 34570693 - 34570821
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||| ||| |||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||  | |||||||    
T  34570693 ccaagtttctctctgttccagctctccttcaaaatctgcaa-agaacacatatatagtagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 34570791  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  34570792 gacacgtttggtgcgtacgacccaaggtac 34570821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 29254383 - 29254260
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||| ||| |||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  29254383 ccaagtttctctctctacaacctcaccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgt 29254285  T
Q  155 gacacgattggtgcgtacgacccaa 179  Q
    |||||| ||||||||||||| ||||    
T  29254284 gacacgtttggtgcgtacgatccaa 29254260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 12739801 - 12739949
Alignment:
Q  28 caaccctaaagataccttctttgtaatc-caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| |||||   || ||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  12739801 caaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaa-agaacacttatatagcagtcttcagctgtc 12739899  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||    
T  12739900 aaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgacc 12739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 12748007 - 12748155
Alignment:
Q  28 caaccctaaagataccttctttgtaatc-caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| |||||   || ||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  12748007 caaccctaaagttacctcctttgatttctcaagtttctctctcttcaacctccacttcaaaatctgtaa-agaacacttatatagcagtcttcagctgtc 12748105  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||    
T  12748106 aaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgacc 12748155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 5429568 - 5429441
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||  | | |||||    
T  5429568 ccaagtttctctctcttcaagctctccttcaaggtctgcaa-agaacacttatatagcagttttcagc-gtcaaaatcgtgtcatgttttcccacatcgt 5429471  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||    
T  5429470 gacacgattggtgcgtacgacccaaggtac 5429441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 38152278 - 38152095
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagttt-ctctctcttcaagctctacttcaaaatctgcaacaga 99  Q
    ||||||||||||||||||||||||||  |||||||||| |||||  |||||||||||| ||| |||||||||| ||||||  |||||||||||||   ||    
T  38152278 ccaagagatcctcactacaaagacactcaaccctaaagttacctcatttgtaatccaaattttctctctcttccagctctt-ttcaaaatctgcacagga 38152180  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |  |||  || | ||||||| ||||||||| |||||||||    
T  38152179 acacttatatagcagtattcagctgtcaaaatcgtgtcacattttttcaaaatgtaaaacgattgatgcgtacgatccaaggtac 38152095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 31985473 - 31985292
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||| |||||| ||||  |||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||||||||||  ||||    
T  31985473 ccaagagatcctcaatacaaaaacactcaaccctaaagttccctcctttgtaatccaagtttctctctcttcaagctc-acttcaaaatctgcacaagaa 31985375  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||  |||||||| |||  ||||||||| |||| || || |||||||| |||||||| |||||||| | ||||||||    
T  31985374 cacttaaatactagtcttcaactgataaaatcgtgccacgatt-tccaaatcgtgtcacgattgatgcgtacgtcacaaggtac 31985292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 35662098 - 35661978
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||| ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||  | |||||||    
T  35662098 ccaagtttttctctcttcaacctctccatcaaaatctgcaa-agaacacttatatagcagtcttcagttgtcaaaattgtatcacgttttgccaaatcgt 35662000  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||||||||||||    
T  35661999 gacacggttggtgcgtacgacc 35661978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 54200157 - 54200313
Alignment:
Q  28 caaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| |||||   ||| |||||||||||||||  |||||| |||||||| || ||| ||||||||||||||||||||||||||| ||    
T  54200157 caaccctaaagttacctcctttgatttcctaagtttctctctctttcagctcttcttcaaaaactacaa-agaacacttatatagcagtcttcagctatc 54200255  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||  | ||||||||||  | |||||||||||||||||||||||    
T  54200256 aaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtac 54200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 30000084 - 30000213
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||| ||| |||||||||||| ||| | |  |||||    
T  30000084 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-aaaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcg 30000181  T
Q  154 tgacacgattggtgcgtacgacccaaggtact 185  Q
    || |||||||| ||||||||||||||||||||    
T  30000182 tgccacgattgatgcgtacgacccaaggtact 30000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 12745715 - 12745799
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12745715 ccaagtttctctctcttcaacctcaacttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgacacg 12745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 52082936 - 52083063
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | | ||||||    
T  52082936 ccaagtttctctctcttcaagctgtccttcaaaatttgcaa-agaacacttatataggagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcg 52083033  T
Q  154 tgacacgattggtgcgtacgacccaaggta 183  Q
    || |||||||| ||| ||||||||||||||    
T  52083034 tgtcacgattgatgcttacgacccaaggta 52083063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 52093943 - 52094070
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||| |||||||||| ||| |||||||||||||||| | | ||||||    
T  52093943 ccaagtttctctctcttcaagctgtccttcaaaatttgcaa-agaacacttatataggagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcg 52094040  T
Q  154 tgacacgattggtgcgtacgacccaaggta 183  Q
    || |||||||| ||| ||||||||||||||    
T  52094041 tgtcacgattgatgcttacgacccaaggta 52094070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 9927736 - 9927865
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttca---gctgtcaaaatc-gtgtcacgtttgtctaaa 150  Q
    |||||||||||||||||||||| || ||||||||||||||  ||||||||||| ||||||||||||   |||| ||||||  |||||||||||  | |||    
T  9927736 ccaagtttctctctcttcaagccctccttcaaaatctgcag-agaacacttatttagcagtcttcatcagctgccaaaatttgtgtcacgttttcccaaa 9927834  T
Q  151 tcgtgacacgattggtgcgtacgacccaagg 181  Q
    |||||||||| ||||||||||||||||||||    
T  9927835 tcgtgacacgtttggtgcgtacgacccaagg 9927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 52095641 - 52095767
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||| ||| |||||  ||||||||| | ||| ||||    
T  52095641 ccaagtttctctctcttcaagctgtccttcaaaatctacaa-agaacacttatatagcagtcttcagc-gtcgaaatc--gtcacgtttttcctatatcg 52095736  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||| |||||||||||||||    
T  52095737 tgtcacgattgatgcttacgacccaaggtac 52095767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 56178915 - 56179035
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||| ||| | | | ||||    
T  56178915 ccaagtttctctctcttcaagctctctttcaaaatctgcaa-agaacacttatataacagtcttcagc-gtcgaaatcgtgtcacatttttcccagatcg 56179012  T
Q  154 tgacacgattggtgcgtacgacc 176  Q
    || |||||||| |||||||||||    
T  56179013 tgtcacgattgatgcgtacgacc 56179035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 5370366 - 5370486
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt--ctaaatcg 153  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||  ||||||||| ||| |||||||||||||||| |  |  |||||    
T  5370366 caagtttctctctcttcaagttctccttcaaaatctgcaa-agaacacttatatagttgtcttcagc-gtcgaaatcgtgtcacgttttttccccaatcg 5370463  T
Q  154 tgacacgattggtgcgtacgacc 176  Q
    || |||||||| |||||||||||    
T  5370464 tgccacgattgatgcgtacgacc 5370486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 48142931 - 48142810
Alignment:
Q  55 ccaagtttctctctcttcaagctcta-cttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatc 152  Q
    |||||||||||||||||| ||||||  |||||||| |||||| |||||||||||||||||| ||||||| ||| |||||||||||||||| | | |||||    
T  48142931 ccaagtttctctctcttctagctctctcttcaaaaactgcaa-agaacacttatatagcagacttcagc-gtcgaaatcgtgtcacgtttttcccaaatc 48142834  T
Q  153 gtgacacgattggtgcgtacgacc 176  Q
    ||| |||||||| |||||||||||    
T  48142833 gtgtcacgattgatgcgtacgacc 48142810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 42599412 - 42599305
Alignment:
Q  5 aagagatcctcactacaaagacaca-accctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacac 103  Q
    |||||| |||||||||||||||||  | ||||||| ||||| |||||||||||||||||||||| ||  ||||||| |||||||||||||||   |||||    
T  42599412 aagagaacctcactacaaagacactcaacctaaagttacctcctttgtaatccaagtttctctcactaaaagctctccttcaaaatctgcaaagaaacac 42599313  T
Q  104 ttatatag 111  Q
    ||||||||    
T  42599312 ttatatag 42599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 18377655 - 18377785
Alignment:
Q  46 ctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||| ||||| ||||||||| || || || |    |||||||||||||||||| |||    
T  18377655 ctttgtaatccaagtttctttctcttcaagctctccttcaaaaactg-aacagaaacacttatgtaacattcatgcattgtcaaaatcgtgtcacgattg 18377753  T
Q  145 tctaaatcgtgacacgattggtgcgtacgacc 176  Q
     | |||| ||| |||||||| || ||||||||    
T  18377754 accaaattgtgtcacgattgatgtgtacgacc 18377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 28468374 - 28468305
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||||||||||||||||||||  ||||||| || | ||| |||||||||||||||||||||||||    
T  28468374 ccaagagatcctcactacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctct 28468305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 13992565 - 13992692
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| | || |||||||||  |||||||||| |||  |||||||  |||  |||||||||||||| || || | |||||    
T  13992565 ccaagtttctctctcttcaagctctccctccaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccagatcgt 13992663  T
Q  155 gacacgattggtgcgtacgacccaaggta 183  Q
    | |||||||| | |||||| | |||||||    
T  13992664 gtcacgattgatacgtacgtcacaaggta 13992692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 39774118 - 39774032
Alignment:
Q  28 caaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctgcaaca-gaacacttatatagca 113  Q
    ||||||||||| ||||| |||||||| || ||||||||||||||| || ||||||||||||||||| ||||  |||||||||||||||    
T  39774118 caaccctaaagttacctcctttgtaaacccaagtttctctctctttaaactctacttcaaaatctg-aacataaacacttatatagca 39774032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 5112494 - 5112573
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatc-caagtttctctctcttcaagctct 79  Q
    |||||||| |||||| ||||||||||  || ||||||  ||||| |||||||||| ||||||||||||||||||||||||    
T  5112494 ccaagagaacctcacaacaaagacactcaaacctaaaattacctcctttgtaatctcaagtttctctctcttcaagctct 5112573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 6655557 - 6655499
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| |||||||||||||||||| ||||    
T  6655557 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtac 6655499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 27417518 - 27417576
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| ||| |||||||||||||||||||    
T  27417518 caaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtac 27417576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24334071 - 24334139
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||| |  |||||||||| ||||||||||||| | |||||||||||||||    
T  24334071 caagagaacctcactacaaagactctcaaccctaaagttaccttctttgtattcccaagtttctctctc 24334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 26363866 - 26363809
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    ||||||||||||||| ||  | |||| |||||||| ||||||||||||||||||||||    
T  26363866 caaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggta 26363809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 36994415 - 36994374
Alignment:
Q  54 tccaagtttctctctcttcaagctctacttcaaaatctgcaa 95  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  36994415 tccaagtttctctctcttcaacctctccttcaaaatctgcaa 36994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 5396384 - 5396348
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5396384 aaatcgtggcacgattggtgcgtacgacccaaggtac 5396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 12745787 - 12745823
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||| ||||||||||||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtac 12745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 50674435 - 50674471
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||||||||||||||||||||||    
T  50674435 aaatcgtgacacgtttggtgcgtacgacccaaggtac 50674471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 1983140 - 1983070
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgt-aatccaagtttctctctct 70  Q
    |||||| | |||||||||||||||||  |||||||||| |||||||||||| || |||||| |||||||||    
T  1983140 ccaagataacctcactacaaagacactcaaccctaaagttaccttctttgtaaacccaagtctctctctct 1983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 3909919 - 3909857
Alignment:
Q  122 ctgtcaaaatcgtgtcacgtttgtctaaa-tcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| |||||||||| |||||| |||||||||| ||| |||||||||| ||||||||    
T  3909919 ctgtcaaaatcatgtcacgttt-tctaaaatcgtgacacggttgatgcgtacgactcaaggtac 3909857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 40630585 - 40630527
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| ||||||| || ||||||||||||    
T  40630585 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggtac 40630527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 51337007 - 51336938
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatcc-aagtttctctctc 69  Q
    |||||||| ||||||||||||||||  ||||||||||| ||| | ||||||| ||| |||||||||||||    
T  51337007 ccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagtttctctctc 51336938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 36994357 - 36994321
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  36994357 aaatcgtgacacggttggtgcgtacgacctaaggtac 36994321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 18234340 - 18234523
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||| |||||  ||||    
T  18234340 ccaagagatcctcactacaaagacactcaaccctaaagctacctcctttgtaatccaagtttctttctcttcaagctctccttcaaaaactgcacaagaa 18234439  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18234440 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 18234523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 10077027 - 10076848
Alignment:
Q  7 gagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacact 104  Q
    ||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||      
T  10077027 gagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttaaagctctccttcaaaatctgcacaagaacata 10076928  T
Q  105 tatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10076927 tatatagcaatcttcagctgtcaaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 10076848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 31086312 - 31086130
Alignment:
Q  5 aagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaaca 102  Q
    ||||||||||||||||||||||||  |||||||||| ||||  ||||||||||||||||||||||||||| |||||  ||||||||||||||  ||||||    
T  31086312 aagagatcctcactacaaagacactcaaccctaaagttaccccctttgtaatccaagtttctctctcttccagctcaccttcaaaatctgcacaagaaca 31086213  T
Q  103 cttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  31086212 cttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtac 31086130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 5017336 - 5017153
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| || ||  |||||||||||||||||||| ||||    |||| ||||||||||||||  ||||    
T  5017336 ccaagagatcctcactacaaagacactcaaccctaaagttatctcgtttgtaatccaagtttctctttctttttcctctccttcaaaatctgcacaagaa 5017237  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||| |||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||    
T  5017236 cacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtac 5017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22963954 - 22964138
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag 98  Q
    |||||||||||| |||||||||||||||  |||||||||| || ||  ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||    
T  22963954 atccaagagatcttcactacaaagacactcaaccctaaagttagctcttttgtaatcaaagtttctctcttttcaagctctagttcaaaatctgcaa-ag 22964052  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  | |||| |||||||| |||| ||||||||  ||||||||    
T  22964053 aacacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtac 22964138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 23824439 - 23824255
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag 98  Q
    |||||||||||| |||||||||||||||  |||||||||| || ||  ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||    
T  23824439 atccaagagatcttcactacaaagacactcaaccctaaagttagctcttttgtaatcaaagtttctctcttttcaagctctagttcaaaatctgcaa-ag 23824341  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  | |||| |||||||| |||| ||||||||  ||||||||    
T  23824340 aacacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtac 23824255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 21272829 - 21272647
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| |||||||||||||||||  |||||||||| ||||  |||||||||| ||||||||||| ||||||| |||||||||||| ||||||   ||    
T  21272829 ccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatcaaagtttctctcacttcaagttctacttcaaaaactgcaaagaaa 21272730  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||| | ||||| ||||||| ||||||||||||| ||||||||    
T  21272729 cacttatatagcagtcttcagttgtcaaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggta 21272647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 24435810 - 24435629
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    ||||||| |||||| ||||||||||  |||||||||| || || ||||||||||| |||||||||||||||||||| | ||||||||| |||||   |||    
T  24435810 caagagaacctcac-acaaagacactcaaccctaaagttatctcctttgtaatcctagtttctctctcttcaagctattcttcaaaatttgcaaacaaac 24435712  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||| |||||||| |||||||||| ||| | ||||||||||||| ||||||||||| |||||||||||    
T  24435711 acttatatagcagtcttcaactgtcaaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaaggtac 24435629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 5757318 - 5757136
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||| | |||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||||| || |||||||||||  | ||    
T  5757318 ccaagagatcctaaatacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttccagctctcctccaaaatctgcacaaaaa 5757219  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||| || |||||||| |||||||| | | ||||||| |||||||    
T  5757218 cacttatttagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacatacgaccaaaggtac 5757136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 5572083 - 5571945
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||| ||||||||||||||  |||||||||| ||||| | |||||||||||||||||||||||  ||||||| |||||||| || ||  ||||    
T  5572083 ccaagagatccccactacaaagacacccaaccctaaagttacctccattgtaatccaagtttctctctcta-aagctctccttcaaaaactccacaagaa 5571985  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5571984 cacttatatagcagtcttcagttgtcaaaatcgtgtcacg 5571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 31979769 - 31979957
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatct-gcaacaga 99  Q
    |||| ||| |||||||||||||||||  |||||||||| ||||| ||||| | |||||||||||||||||  |||||||   ||||||||| | || | |    
T  31979769 ccaaaagaacctcactacaaagacactcaaccctaaagttacctcctttgcagtccaagtttctctctctaaaagctctctctcaaaatctggaaagaaa 31979868  T
Q  100 acact----tatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  31979869 acacttatatatatagcagtcttcaattgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtac 31979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5407187 - 5407315
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||| ||| || | |||||    
T  5407187 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttcttcaatcg 5407284  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  5407285 tgtcacgattgatgcgtacgacccaaggtac 5407315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 23896636 - 23896748
Alignment:
Q  28 caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtca 127  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||||||||||||  |    
T  23896636 caactctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatatgcacaagaactcttatatagcagtcttcagctgata 23896735  T
Q  128 aaatcgtgtcacg 140  Q
    |||||||| ||||    
T  23896736 aaatcgtgccacg 23896748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5406477 - 5406605
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||| |||||||| ||| |||||||||||||||| | |  |||||    
T  5406477 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-ataacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 5406574  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  5406575 tgccacgattgatgcgtacgacccaaggtac 5406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5410802 - 5410930
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||| |||||||| ||| |||||||||||||||| | |  |||||    
T  5410802 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-ataacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 5410899  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  5410900 tgccacgattgatgcgtacgacccaaggtac 5410930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5411512 - 5411640
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||| ||| | |  |||||    
T  5411512 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcg 5411609  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  5411610 tgccacgattgatgcgtacgacccaaggtac 5411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 31404953 - 31405081
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||| ||| |||||||||||||||| | |  |||||    
T  31404953 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-ataacacttatatagctgtcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 31405050  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||||| |||||||    
T  31405051 tgccacgattgatgcgtacgacctaaggtac 31405081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 33211464 - 33211592
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcg 153  Q
    ||||||||||||||||||||  ||| ||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||| ||||||    
T  33211464 ccaagtttctctctcttcaacttctccttcacaatctgcaa-agaacacttatatagcagtattgagctgtcaaaatcgtgtcatgttttgtc-aaatcg 33211561  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||| | |||||||||||||||||| ||||    
T  33211562 tgacatggttggtgcgtacgacccaaagtac 33211592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 30834816 - 30834944
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt--ctaaatcg 153  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||| | ||||||||||||||||||||| |  |  |||||    
T  30834816 caagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagttgtcttctg-tgtcaaaatcgtgtcacgttttttccccaatcg 30834913  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  30834914 tgccacgattgatgcgtacgatccaaggtac 30834944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 16452608 - 16452736
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||||| | |  |||||    
T  16452608 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagctgtcttcatc-gtctaaatcgtgtcacgtttttccccaatcg 16452705  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || || ||||| |||||||||||||||||||    
T  16452706 tgccatgattgatgcgtacgacccaaggtac 16452736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 33160638 - 33160761
Alignment:
Q  60 tttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcgtgaca 158  Q
    ||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||  | | ||||||| ||    
T  33160638 tttctctctcttccagctctccatcaaaatctgcaa-agaacacttatatagcagtcttcagc-gtcaaaattgtgtcacgttttccatcaatcgtgtca 33160735  T
Q  159 cgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||| ||||    
T  33160736 cgattgatgcgtacgacccaatgtac 33160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 31936832 - 31936942
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||  || ||||||||||||||||||||   ||    
T  31936832 ccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaaaacctctacttcaaaatctgcaaagaaa 31936931  T
Q  101 cacttatatag 111  Q
    |||||||||||    
T  31936932 cacttatatag 31936942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 9183310 - 9183393
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||||    
T  9183310 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaaaacttatatagtagtcttcagc-gtcaaaatcgtgtcacg 9183393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 5413671 - 5413757
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    |||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  5413671 ccaagtttctctatcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtaacgttt 5413757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 22709267 - 22709345
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctct 79  Q
    ||||||||||||||||||||||||||  ||||||| || | ||| ||||||||||||||||| ||||||||||| ||||    
T  22709267 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctcttcaaactct 22709345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 16452760 - 16452847
Alignment:
Q  97 agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcta-aatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||| ||||||| | ||| |||||||||||||||| ||   ||||||| |||||||| |||||||||||||||||||    
T  16452760 agaacacttatatagctgtcttcatc-gtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtac 16452847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 26954648 - 26954710
Alignment:
Q  122 ctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| ||||||||| ||||  | ||||||||||||| ||| |||||||||||||||||||    
T  26954648 ctgtcaagatcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtac 26954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 5571957 - 5571921
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5571957 aaatcgtgtcacgattggtgcgtacgacccaaggtac 5571921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 24714730 - 24714806
Alignment:
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgaccca 178  Q
    |||||||||||||||| |||| |||||||| |||||||| ||| | | ||||||||||| ||||  |||| ||||||    
T  24714730 acttatatagcagtctccagcagtcaaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgaccca 24714806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 21593267 - 21593209
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||| |||  | ||||||||||||| ||||| || ||||||||||||||    
T  21593267 caaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggtac 21593209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21801181 - 21801113
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatc-caagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| || ||||||||||||||    
T  21801181 caagagaacctcactacaaagacactcaaccctcaagttacctgctttgtattctcaagtttctctctc 21801113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 33528464 - 33528281
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  33528464 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 33528365  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33528364 cacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 33528281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 33118392 - 33118575
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||  ||||    
T  33118392 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagctcttcttcaaaatctgcacaagaa 33118491  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  33118492 cacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 33118575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 34389108 - 34389290
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||  ||||    
T  34389108 ccaagagatcctcactacaaagacacacaaccctaaagttacctcctttgtaatccaagtttctctcacatcaagctctccttcaaaatctgcacaagaa 34389207  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  34389208 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacgacccaaggtac 34389290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 21630202 - 21630385
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  ||| |||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||  ||||    
T  21630202 ccaagagatcctcactacaaagacactcaacactaaagttacctcctttgtaatccaagtttctctcccttcaagctctccttcaaaatctacacaagaa 21630301  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21630302 cacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtac 21630385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 20522479 - 20522662
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||| |||||||||| |||||||||||||| |||||||  ||||||||||||||  ||||    
T  20522479 ccaagagatactcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctctccaagctcaccttcaaaatctgcagaagaa 20522578  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20522579 cacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtac 20522662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 6 - 184
Target Start/End: Complemental strand, 14698846 - 14698666
Alignment:
Q  6 agagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacac 103  Q
    |||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||  ||||||| ||||||||||| ||  |||||||    
T  14698846 agagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagctctccttcaaaatctacacaagaacac 14698747  T
Q  104 ttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  14698746 ttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaaggtac 14698666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 10707092 - 10706910
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||| |   |||||||||| ||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||  ||||    
T  10707092 ccaagagatcctcactacaaagataataaaccctaaagttacctcctttgtaatctaagtttctctctcttccagctcttcttcaaaatctgcacaagaa 10706993  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||||||||||||||||    
T  10706992 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaaccgtggcacgattggtgtgtacgacccaaggtac 10706910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 28259017 - 28258835
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||    
T  28259017 ccaagagatcctcactataaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctacacaagaa 28258918  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||| || |||||||| |||||||| |||||||||||||||||||    
T  28258917 cacttatatagcagtcttcagttgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatgcgtacgacccaaggtac 28258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 8389989 - 8389806
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||| ||||||||||||| |  |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||||||   |||    
T  8389989 ccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttgtaatccaagtttctctctcttccagctctacttcaaaatctgcacaggaa 8389890  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||| |||||||||||| |||||||||||||| |||| || ||||| ||||| |||||||||||||||||||||||||    
T  8389889 cacttaaataacagtcttcagctatcaaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaaggtac 8389806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 23078311 - 23078133
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||| ||||  ||||||||||  ||||| |||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||    
T  23078311 ccaagagattctcatcacaaagacactcaacccaaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaa 23078212  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    |||||||||||||||||||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||    
T  23078211 cacttatatagcagtcttcaactgtcaaaattgtgtcacgttt-tccaaatcgtggcacgattggtgcgtacgacccaag 23078133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 13569586 - 13569770
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttc-aagctctacttcaaaatctgcaacaga 99  Q
    ||||||||||||||||||||||||||  |||||||||| || ||  |||||||||||||||||||||||| | ||||||| ||| ||||||||||  |||    
T  13569586 ccaagagatcctcactacaaagacacttaaccctaaagttatctcatttgtaatccaagtttctctctctcccaagctctcctttaaaatctgcacaaga 13569685  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||| ||||||||||||||||||||||||||  ||| || ||||||||||||||||||||| ||||| |||||||||    
T  13569686 acacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtac 13569770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 36757602 - 36757463
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||  ||||    
T  36757602 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaattcaagtttctctcacttcaagctctccttcaaaatctgcacaagaa 36757503  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  36757502 cacttatataacagtcttcagctgtcaaaatcgtgtcacg 36757463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 2837123 - 2837251
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||| |||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| ||||||  | ||||| |    
T  2837123 ccaagtttctctctcttcaaactctccttcaaaatttacaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgttacgttttcccaaatcat 2837221  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  2837222 gacacgtttggtgcgtacgacccaaggtac 2837251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 39284774 - 39284654
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||    
T  39284774 ccaagtttctctctcttcaacctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcatgtcacgttttcccaaatcgt 39284676  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||  |||||||||||||||    
T  39284675 gacacatttggtgcgtacgacc 39284654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 2334696 - 2334824
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| | | ||||||    
T  2334696 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcagtcttcagc-gtcgaaatcgtgtcacgtttttcccaaatcg 2334793  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| || ||||||||||||||||    
T  2334794 tgtcacgattgatgtgtacgacccaaggtac 2334824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 36318288 - 36318416
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcg 153  Q
    |||||||||||||||||  | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |    
T  36318288 ccaagtttctctctcttttacctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgtc-aaattg 36318385  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| |||||||||||||  ||||||||    
T  36318386 tgacacggttggtgcgtacgattcaaggtac 36318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 17865462 - 17865589
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||| |||||||||||||||  |||||||||| ||||| |||||||||||||||| || |||||||||||||| ||||||||| ||||  ||||    
T  17865462 ccaagagatcttcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtt-ctgtctcttcaagctcttcttcaaaatttgcacaagaa 17865560  T
Q  101 cacttatatagcagtcttcagctgtcaaa 129  Q
    |||||||||||||||||| ||||||||||    
T  17865561 cacttatatagcagtctttagctgtcaaa 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5723533 - 5723661
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||| | |  |||||    
T  5723533 ccaagtttctctctcttcaagctcttcttcaaaatctgcaa-agaacatttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 5723630  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  5723631 tgccacgattgatgcgtacgacccaaggtac 5723661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 36988354 - 36988482
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| |||  | | |||||    
T  36988354 ccaagtttctctctcttcaagctctccttcaaaatatgcaa-agaacacttatatagcagtcttcagc-gtcaaaatcgtgtcacattttccatcaatcg 36988451  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||| |||| |||||||||||||||||||    
T  36988452 tgtcacaattgatgcgtacgacccaaggtac 36988482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 38312129 - 38312045
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38312129 ccaaatttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 38312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 29867756 - 29867641
Alignment:
Q  57 aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcgtg 155  Q
    ||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||    
T  29867756 aagtttctctctctttaagctctctttcaaaaactgcaa-agaacacttatatagcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtg 29867658  T
Q  156 acacgattggtgcgtac 172  Q
    ||||| |||||||||||    
T  29867657 acacgtttggtgcgtac 29867641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 39483235 - 39483316
Alignment:
Q  103 cttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtac 39483316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 6595287 - 6595404
Alignment:
Q  57 aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcgtg 155  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||  | | |||||||    
T  6595287 aagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcaac-gtcaaaatcgtgtcacgttttccatcaatcgtg 6595384  T
Q  156 acacgattggtgcgtacgac 175  Q
     || ||||| ||||||||||    
T  6595385 tcaagattgatgcgtacgac 6595404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 45099644 - 45099516
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| |||||| || |||||||||||||||||||| | |  |||||    
T  45099644 ccaagtttctctctcttcaagctcaccttcaaaatctacaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 45099547  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||  ||||||||    
T  45099546 tgccacgattgatgcgtacgattcaaggtac 45099516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 3492011 - 3492191
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||||||||||||||  |||||||| |  | ||| |||||||||||||||||||||||||  ||||| |||| |||||||||||  ||||    
T  3492011 ccaagagatcctcactacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctct--aagctttactccaaaatctgcacaagaa 3492108  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||  |||||||  |||  ||||| |||||||| || || || ||||| |||||||||| |||||| | ||||||||    
T  3492109 cacttaaatactagtcttccactgataaaattgtgtcacgatt-tccaagtcgtgtcacgattggtacgtacgtcacaaggtac 3492191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 17057653 - 17057732
Alignment:
Q  60 tttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  17057653 tttctctctcttcaaactctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaaatgtgtcacg 17057732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 17085636 - 17085715
Alignment:
Q  60 tttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  17085636 tttctctctcttcaaactctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaaatgtgtcacg 17085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 4503411 - 4503539
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||||  | |||||||||||||||||||| | |  |||||    
T  4503411 ccaagtttctctctcttctagctctccttcaaaatctgcaa-agaacacttatatagttgtcttctac-gtcaaaatcgtgtcacgtttttccccaatcg 4503508  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||| |||| ||||||||| |||||||||    
T  4503509 tgccacaattgatgcgtacgatccaaggtac 4503539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 40739091 - 40739271
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttc-aaaatctgcaacaga 99  Q
    |||||||||||||||||||||||||  |||||||| || | ||| ||||||||||||||||  ||||||||||| ||||||| | |||| |||||  |||    
T  40739091 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtt--tctctcttcaa-ctctactccaaaaaactgcacaaga 40739187  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| |||  |||||||| |||  |||||||||||||| || || |||||||| |||||||| | |||||| | ||||||||    
T  40739188 acacttaaatacaagtcttcaactgataaaatcgtgtcacgatt-tccaaatcgtgtcacgattgatacgtacgtcacaaggtac 40739271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 36205942 - 36206072
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacact--tatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaat 151  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||  |||||||| |||||| || |||||||||||||||||||| | |  |||    
T  36205942 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaat 36206039  T
Q  152 cgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||| |||| ||||||| | |||||||||    
T  36206040 cgtgccacaattgatgcgtacaatccaaggtac 36206072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 40015182 - 40015311
Alignment:
Q  3 ccaagagatcctcactacaaag-acacaaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctgcaacag-a 99  Q
    |||||||| ||||| ||||||  || ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||||||| ||||| |    
T  40015182 ccaagagaacctcaatacaaaacactcaaccctaaagttacctcctttgtaaacctaaatttctctctcttcaagctctacttcaaaatctg-aacagaa 40015280  T
Q  100 acacttatatagcagtcttcagctgtcaaaa 130  Q
    ||||||| |||| |  || ||||||||||||    
T  40015281 acacttaaatagtaccctgcagctgtcaaaa 40015311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 10445304 - 10445238
Alignment:
Q  6 agagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||| ||||||||||||||||  ||||||||||| ||||| |||||||||| ||||||||||||||    
T  10445304 agagaacctcactacaaagacattcaaccctaaagttacctcctttgtaatctaagtttctctctct 10445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 25409890 - 25410080
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctctt--------caagctctacttcaaaatctg 92  Q
    ||||||||||||| ||||||||||||  |||||||  | | ||| || ||||||||||||||||||||||         |||||||||||||||||||||    
T  25409890 ccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgtaatccaagtttctctctctaagctcttccaagctctacttcaaaatctg 25409989  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||  |||||||||| ||| ||  ||||  |||  ||||| |||||||| || || || ||||| |||||||||| |||||| | ||||||||    
T  25409990 cacaagaacacttaaatatcatccttcctctgataaaattgtgtcacgatt-tccaagtcgtgtcacgattggtacgtacgtcacaaggtac 25410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 15903730 - 15903642
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaa 88  Q
    |||||||| ||||||||||||||||  |||||| || | |||||  ||||||| || || |||||||||||||||||||||||||||||    
T  15903730 ccaagagaacctcactacaaagacattcaacccaaaggttacctcatttgtaaacccaaatttctctctcttcaagctctacttcaaaa 15903642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35447451 - 35447508
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| || ||  |||||||||||| |||||||||||||||||||||||    
T  35447451 caaaatcgtgtcacgatt-tcccaatcgtgacacgtttggtgcgtacgacccaaggtac 35447508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 4484610 - 4484737
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||| | |||| |||  |||||||||  |||||||||| |||  || ||||  |||  |||||||||||||| || || | |||||    
T  4484610 ccaagtttctctctcttccaactct-ctttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt-tccagatcgt 4484707  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||||||||| |||||| ||||||||||    
T  4484708 gtcacgattggtacgtacgtcccaaggtac 4484737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 30833234 - 30833107
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||| ||||||| |||||  ||||||| ||||||  |||||||||| |||  |||||||  |||  |||||||||||||| || || || ||||    
T  30833234 ccaagtttctttctcttccagctcaccttcaaa-tctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaagtcgt 30833137  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||||||||| |||||| | ||||||||    
T  30833136 gtcacgattggtacgtacgtcacaaggtac 30833107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 34682170 - 34682102
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| | |||||||||||||||    
T  34682170 caagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattcccaagtttctctctc 34682102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 31056303 - 31056371
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| | |||||||||||||||    
T  31056303 caagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 31056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 42269629 - 42269697
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||| ||||| ||||| ||||||| | |||||||||||||||    
T  42269629 caagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagtttctctctc 42269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 17865589 - 17865617
Alignment:
Q  156 acacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||    
T  17865589 acacgattggtgcgtacgacccaaggtac 17865617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 133; Significance: 2e-69; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 2751 - 2933
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||  ||||    
T  2751 ccaagagatcctcactacaaagaaacttaaccctaaagttaccttttttgtaatccaa-tttctctctcttcaagctctccttcaaaatctgcacaagaa 2849  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2850 cacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 5942 - 6125
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||    
T  5942 ccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctcttcaagctctccttcaaaatctgcacaagaa 6041  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  6042 catttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtac 6125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 133119 - 132937
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||| ||  |||||||||| | ||| |||||||||||||||||||||||||| ||||||| || |||||| ||||  ||||    
T  133119 ccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttgtaatccaagtttctctctctttaagctctcctccaaaatttgcacaagaa 133020  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| || |||||||| |||||||| | |||||||||||||||||    
T  133019 cacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgacccaaggtac 132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 2e-69; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 1736133 - 1735950
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||    
T  1736133 ccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctccaaactctccttcaaaatctgcataagaa 1736034  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  1736033 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtac 1735950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 24694995 - 24694812
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||    
T  24694995 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaaatttctctctcttcaagctcttcttcaaaatctgcacaagaa 24694896  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  24694895 cacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtac 24694812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 40592611 - 40592428
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||  ||||    
T  40592611 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctcattcaaaatctgcacaagaa 40592512  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  40592511 cacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaaggtac 40592428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 8370318 - 8370136
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  8370318 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaa 8370219  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    | ||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  8370218 cgcttatatagcagtcttcagttgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattggtgcgtacaacccaaggtac 8370136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 36029350 - 36029533
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||  ||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||  ||||    
T  36029350 ccaagagatcctcactacaaagacactcaaccctaaatttacctcctttgtaatccaagtttctcttacttcaagctctccttcaaaatctgcacaagaa 36029449  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  36029450 cacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaaggtac 36029533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 47923733 - 47923550
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||| ||||||||||||||||  || ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  47923733 ccaagagattctcactacaaagacactcaatcctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 47923634  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  47923633 cacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaaggtac 47923550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 48438472 - 48438655
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||| |||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||  ||||    
T  48438472 ccaagagatccttactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctattcaagctctccttcaaaatttgcacaagaa 48438571  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  48438572 cacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtac 48438655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 39032383 - 39032202
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||| |||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||    
T  39032383 ccaagagatc-tcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctacttcaaaaactgcacaagaa 39032285  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||||||||    
T  39032284 cacttatatagcaatcttcagctgtcaaaatcgtgtcacgattttc-aaatcgtggcacgattggtgcgtacgacccaaggtac 39032202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 30709599 - 30709444
Alignment:
Q  28 caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtca 127  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  30709599 caactctaaagttacctcctttgtaatccaagtttctgtctcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtca 30709500  T
Q  128 aaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  30709499 aaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggta 30709444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 27026961 - 27027145
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag 98  Q
    |||||||||||||||| |||||||||||  |||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||    
T  27026961 atccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaatccaagtttttctctcttcaagctcttcttcaaaatctgcacaag 27027060  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |  |||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||    
T  27027061 attacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaaacgtggcacgattggtgcgtacgacccaaggtac 27027145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 16264606 - 16264788
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||  ||||    
T  16264606 ccaagagatcctcattacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctcttacttcaagctctccttcaaaaactgcacaagaa 16264705  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||| |||||||||||    
T  16264706 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgctt-tccaaatcgtggcacgattggtgcgtaccacccaaggtac 16264788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 180
Target Start/End: Original strand, 8126887 - 8127066
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||| | |||||||||||||||||  |||  ||||| ||| |||||||||||||||||||||||||||  || |||| |||||||||||||||   ||    
T  8126887 ccaagaaaacctcactacaaagacactcaactgtaaagttactttctttgtaatccaagtttctctctctaaaaactctccttcaaaatctgcaaataaa 8126986  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  8126987 cacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaag 8127066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 27974781 - 27974599
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  27974781 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 27974682  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| |||||||||||||  ||||||||| |||  || || ||||| || |||||||| | |||||||||||||||||    
T  27974681 cacttatataacagtcttcagctgataaaatcgtgccacaatt-tccaaatcatgtcacgattgatacgtacgacccaaggtac 27974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 40734388 - 40734259
Alignment:
Q  54 tccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcg 153  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  40734388 tccaagtttctgtctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtccaaatcg 40734290  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| ||||||||| |||||||||    
T  40734289 tgacacgattgatgcgtacgatccaaggtac 40734259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 27038308 - 27038481
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||||||||||| |||  |||||||||| || || ||||||||||||||||| |||||||||||||||| ||||||||||| ||  ||||    
T  27038308 ccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaatccaagtttttctctcttcaagctcttcttcaaaatctacacaagaa 27038407  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||    
T  27038408 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt----------gtggcacgattggtgcgtacgacccaaggtac 27038481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 40844912 - 40845093
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  |||||||||| ||||| |||||||||| |||||||||| |||| || |||| ||||||||| ||||  ||||    
T  40844912 ccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctatcttaaaactctccttcaaaatttgcacaagaa 40845011  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||  ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  40845012 cacttata--gcagtcttcagctatctaaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtac 40845093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 29812952 - 29812824
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  29812952 ccaagtttctctctcttcaacctcttcttcaaaatctacaa-agaacacttatatagcagtcttcagcggtcaaaatcgtgtcacgtttttccaaatcgt 29812854  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  29812853 gacacgtttggtgcgtacgacccaaggtac 29812824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 25929224 - 25929042
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    ||||||| |||||||||||||||||  |||||||||| ||||| |||||||||| ||||||||||| |||||| |||||||||||||||| |||   |||    
T  25929224 caagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctcacttcaaactctacttcaaaatctacaaagaaac 25929125  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| | |||||||||||||||||||||||||| ||| | ||||||| ||||| ||||| ||||||| |||| ||||    
T  25929124 acttatatagaaatcttcagctgtcaaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaatgtac 25929042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 37725932 - 37726114
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctactt-caaaatctgcaacaga 99  Q
    ||||||||||||||||||||||||||  |||||||||| | ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  |||    
T  37725932 ccaagagatcctcactacaaagacactcaaccctaaagtttcctcctttgtaatccaagtttctctctcttcaagctc-acttccaaaatctgcacaaga 37726030  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||| | ||||||  ||||||||| ||||||| || |||||||| |||||||| | |||||||||||| ||||    
T  37726031 acacttatatagcagtttgcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgacccaatgtac 37726114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 33386504 - 33386326
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| |  || ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  33386504 ccaagagatcctcactacaaagacactcaaccctaaagttctctcctttgtaatccaagtttctctctcttcaagctctactccaaaatctgcacaagaa 33386405  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    |||||| ||| |||||||||||||  ||||||||| |||  || || |||||||| |||||||| | |||||||||||||    
T  33386404 cacttaaataccagtcttcagctgataaaatcgtgccacaatt-tccaaatcgtgtcacgattgatacgtacgacccaag 33386326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 21711479 - 21711617
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  21711479 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctct-cttcaaaatctgcacaagaa 21711577  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||| |||||||||| || ||||| |||||||| ||||    
T  21711578 cacttacatagcagtctgcaactgtccaaatcgtgacacg 21711617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 35925735 - 35925879
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagatac--cttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacag 98  Q
    |||| ||||||||||||||||||||  ||||||||||| |||  || |||||||||||||||||||||| ||| ||||||  |||||||| |||||  ||    
T  35925735 ccaaaagatcctcactacaaagacattcaaccctaaagttacatctcctttgtaatccaagtttctctcactttaagctcaccttcaaaaactgcacaag 35925834  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35925835 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 35925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 29810757 - 29810629
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||| ||| ||||||| || | ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  29810757 ccaagtttttctttcttcaaccttttcttcaaaatatgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 29810659  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  29810658 gacacgtttggtgcgtacgacccaaggtac 29810629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 51398703 - 51398583
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||| ||||||||| |||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||  | |||||||    
T  51398703 ccaagtttctatctcttcaacctctccttcaaaatctacaa-agaacacttatatagcaatcttcagctgtcaaaatcgtgtcacattttcccaaatcgt 51398605  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||||||||||||    
T  51398604 gacacgtttggtgcgtacgacc 51398583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5236735 - 5236864
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||||| | |||||||||||||||  |||||||||| |||| |  || ||  |||||||||||||||||||||  | |||||||    
T  5236735 ccaagtttctctctcttcaagccccacttcaaaatctgcacaagaacacttaaatagtaccctgcaagtgtcaaaatcgtgtcacgttttgccaaatcgt 5236834  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  5236835 gacacgtttggtgcgtacgacccaaggtac 5236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 27453217 - 27453396
Alignment:
Q  3 ccaagagatcctcactacaaagacacaaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaaca 102  Q
    ||||||||||||||||||| | || ||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||    
T  27453217 ccaagagatcctcactacagacactcaaccctaaagttccctcctttgtaatccaagtttctctctcttcaagctct-cttcaaaaactgcacaagaaca 27453315  T
Q  103 cttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| | |  |||||||| |||  ||||||||| |||| || || |||||||| |||||||| | |||||| | ||||||||    
T  27453316 cttaaaaactagtcttcaactgataaaatcgtgccacgatt-tccaaatcgtgtcacgattgatacgtacgtcacaaggtac 27453396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 23410554 - 23410737
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaat-ctgcaacag 98  Q
    |||||||| |||||||||||||||||  |||||||||| |  || ||||| ||||| ||||||||||||||||| ||||| ||||||||  ||||||       
T  23410554 ccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttctctctcttca-gctctccttcaaaaaactgcaaaga 23410652  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||| |||| |||||||||||  | ||||||||||||| |||||| | || |||||||||||    
T  23410653 aacacttatatagcagtcttcagctgtc-aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtac 23410737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 27986285 - 27986147
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| | ||| ||||||||||||||||||||||||||| | |||| |||| |||||||||  ||||    
T  27986285 ccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctcttccaactct-cttccaaatctgcacaagaa 27986187  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||| ||| | |||||| || | |||||||||||||||    
T  27986186 cacttaaatacctgtcttctgcggacaaaatcgtgtcacg 27986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 32143580 - 32143761
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||| |||||||||||||||  ||||||| || | ||| ||||||||||||| ||||||||||||||| |||| || |||||||||||  ||||    
T  32143580 ccaagagatcatcactacaaagacactcaaccctagagttccctcctttgtaatccaaatttctctctcttcaa-ctctcctccaaaatctgcacaagaa 32143678  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||  |||||||| |||  |||||||||||||| || || |||||||| |||||||| | |||||| | ||||||||    
T  32143679 cacttaaatacaagtcttcaactgataaaatcgtgtcacgatt-tccaaatcgtgtcacgattgatacgtacgtcacaaggtac 32143761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 44331735 - 44331854
Alignment:
Q  64 tctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgatt 163  Q
    |||||||| ||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||| || |||||||  | ||||||||||||  ||    
T  44331735 tctctctttaagctctccttcaaaatctgcaa-ataacacatatatagcagtcttcagctgtcaaaatcatgccacgtttccccaaatcgtgacacattt 44331833  T
Q  164 ggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||||||||||    
T  44331834 ggtgtgtacgacccaaggtac 44331854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 7762146 - 7762025
Alignment:
Q  62 tctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcta-aatcgtgacacg 160  Q
    |||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||   ||||||| ||||    
T  7762146 tctctctcttcaagctttccttcaaaatttgcaa-agaacacttatatagcagtcttcagc-gtctaaatcgtgtcacgtttttccccaatcgtgtcacg 7762049  T
Q  161 attggtgcgtacgacccaaggtac 184  Q
    |||| |||||||||||||||||||    
T  7762048 attgatgcgtacgacccaaggtac 7762025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 45095054 - 45094925
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||  || |||||||||||||||| | |  |||||    
T  45095054 ccaagtttctctctcttcaagctcatcttcaaaatctgcaa-agaacacttatatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcg 45094956  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||  |||||||||    
T  45094955 tgtcacgattgatgcgtacgttccaaggtac 45094925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 37408348 - 37408220
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  ||||||||||| ||  |||||||||||||| ||||||||||| |  |||||| ||| ||| || || |||||||    
T  37408348 ccaagtttctctctcttcaagctcaccttcaaaatcttcacaagaacacttatataccagtcttcagcagataaaatcttgttacgatt-tccaaatcgt 37408250  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||||||| | |||||||||||||||||    
T  37408249 gccacgattgatacgtacgacccaaggtac 37408220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 40735259 - 40735190
Alignment:
Q  115 tcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  40735259 tcttcagctgtcaaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtac 40735190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 26928428 - 26928290
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||||||||||||||||||  |||||||| || | |||  |||||||||||||||| ||||||||||| |||| || |||||||||||  ||||    
T  26928428 ccaagagatcctcactacaaagacactcaaccctagagttccctcgtttgtaatccaagtttttctctcttcaa-ctctcctccaaaatctgcacaagaa 26928330  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||| |||  |||||||| |||  ||||||||||||||    
T  26928329 cacttaaatacaagtcttcaactgataaaatcgtgtcacg 26928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 5260602 - 5260730
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||| |||| | |  |||||    
T  5260602 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcatgtttttccccaatcg 5260699  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||| |||| ||||||||| |||| ||||    
T  5260700 tgccacaattgatgcgtacgatccaaagtac 5260730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 6794543 - 6794434
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    ||||||| ||||||||||| |||||  |||||||||| ||||| |||||||||||||||||||||||||  || |||| |||||||||||||||   |||    
T  6794543 caagagaacctcactacaatgacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaacctctccttcaaaatctgcaaagaaac 6794444  T
Q  102 acttatatag 111  Q
    ||||||||||    
T  6794443 acttatatag 6794434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 5258424 - 5258509
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||| |||||| || ||||||||||||||||||||    
T  5258424 caagtttctctctcttctagctctccttcaaaatctgcaa-agaacacgtatatagctgtcttctgc-gtcaaaatcgtgtcacgttt 5258509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 26299245 - 26299329
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttca 85  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||||||  ||||||| |||||    
T  26299245 ccaagagatcctcactacaaagacattcaaccctaaagttacctcctttataatccaagtttctctctctaaaagctctccttca 26299329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 9636406 - 9636535
Alignment:
Q  55 ccaagtttctctctcttcaagctcta-cttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatc 152  Q
    |||||||||||||||||| | |||   ||||||||||||||| |||||||||||||||| | |||| || |||||||||||||||||||| | |  ||||    
T  9636406 ccaagtttctctctcttccaactcactcttcaaaatctgcaa-agaacacttatatagctgccttctgc-gtcaaaatcgtgtcacgtttttccccaatc 9636503  T
Q  153 gtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||| |||||||| ||||||||| |||||||||    
T  9636504 gtgccacgattgatgcgtacgatccaaggtac 9636535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 44331444 - 44331360
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt 142  Q
    |||||||||||||||| |||||||| ||||||| ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  44331444 ccaagtttctctctct-caagctctccttcaaa-tctacaa-agaacatttatatagcagtcttcagctgtcaaaatcatgtcacgtt 44331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 7764321 - 7764213
Alignment:
Q  75 gctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcgtgacacgattggtgcgtacg 173  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||  || |||||||||||||||| | |  |||| || |||||||| ||||||||    
T  7764321 gctctccttcaaaatttgcaa-agaacacttatatagcagtcttcagc-atctaaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacg 7764224  T
Q  174 acccaaggtac 184  Q
    |||||||||||    
T  7764223 acccaaggtac 7764213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 23198216 - 23198344
Alignment:
Q  54 tccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcg 153  Q
    ||||||||||||||||||| | |||| ||||||||||||||  |||||||||| |||  |||||||  |||  |||||||||||||| || || ||||||    
T  23198216 tccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaaatcg 23198313  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||||| |||||| | ||||||||    
T  23198314 tgtcacgattggtacgtacgtcacaaggtac 23198344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 23200416 - 23200543
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||| | |||| ||||||||||||||  | |||||||| ||| ||||||||  |||  |||||||||||||| || || |||||||    
T  23200416 ccaagtttctctctcttccaactct-cttcaaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgatt-tccaaatcgt 23200513  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||||||||| |||| | | ||||||||    
T  23200514 gtcacgattggtacgtaagtcacaaggtac 23200543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 23392134 - 23392300
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaat-ctgcaacag 98  Q
    |||||||| |||||||||||||||||  |||||||||  |  || ||||| | ||| ||||||||||||||||| ||||| ||||||||  ||||||       
T  23392134 ccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttctctctcttca-gctctccttcaaaaaactgcaaaga 23392232  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtg 167  Q
    |||||||||||| |||| ||||| ||| ||||| |||||||||||  | ||||||||||||| ||||||    
T  23392233 aacacttatataacagt-ttcagatgttaaaattgtgtcacgttttgccaaatcgtgacacggttggtg 23392300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 37466554 - 37466642
Alignment:
Q  5 aagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatct 91  Q
    |||||| |||||||||||||||||  | | |||||| ||||| |||||||||||||||||||||||||  || |||| |||||||||||    
T  37466554 aagagaacctcactacaaagacactcagctctaaagttacctcctttgtaatccaagtttctctctctaaaacctcttcttcaaaatct 37466642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 43404301 - 43404358
Alignment:
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  43404301 aaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 43404358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 21711605 - 21711641
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||    
T  21711605 aaatcgtgacacgattggtgcgtacgacccaaggtac 21711641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3328186 - 3328108
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctct 79  Q
    ||||||||  |||||||||||||||  ||||||||||| || || |||| ||||||||||||||||||||  |||||||    
T  3328186 ccaagagaagctcactacaaagacattcaaccctaaagttatctcctttctaatccaagtttctctctctaaaagctct 3328108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 1306209 - 1306278
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||||||||||||||||||||  |||| ||| || | ||| |||| ||||||||||||||||||||    
T  1306209 ccaagagatcctcactacaaagacactcaactctagagttccctcctttataatccaagtttctctctct 1306278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 1417320 - 1417251
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||| | |||||||||||||||||  |||||||||| ||||| ||||||||| ||||||| |||||||    
T  1417320 ccaagataacctcactacaaagacactcaaccctaaagttacctcctttgtaattcaagtttttctctct 1417251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 3323520 - 3323451
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| |||||||| ||||||||  |||||||||| ||||| |||||||||| |||||| |||||||    
T  3323520 ccaagagaacctcactataaagacactcaaccctaaagttacctcctttgtaatcgaagtttgtctctct 3323451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 4569552 - 4569494
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||  |  || ||||||||| |||||||||||||||||||||||    
T  4569552 caaaatcgtgtcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggtac 4569494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 55302532 - 55302590
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  55302532 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 55302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3715828 - 3715760
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatc-caagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| || ||||||||||||||    
T  3715828 caagagaacctcactacaaagacattcaaccctaaagttacctcctttgtattctcaagtttctctctc 3715760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 34490811 - 34490775
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtac 34490775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 4386806 - 4386736
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgta-atccaagtttctctctct 70  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||| |||||||  | |||||||||||||||    
T  4386806 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattttcaagtttctctctct 4386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 6096167 - 6096225
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| | ||  | ||||||||||||  |||||||||||||||||||||||    
T  6096167 caaaatcgtgtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggtac 6096225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 36018451 - 36018401
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    ||||||||||||||||||  | ||||||||||| | |||||||||||||||    
T  36018451 caaaatcgtgtcacgttttcccaaatcgtgacatggttggtgcgtacgacc 36018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 54593305 - 54593247
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| | ||  | ||||||||||||| |||||||||||||||||| ||||    
T  54593305 caaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtac 54593247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 25796040 - 25796108
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| | |||||||||||||||    
T  25796040 caagagagcctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 25796108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 46173309 - 46173276
Alignment:
Q  151 tcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| |||||||||||||||||||||||    
T  46173309 tcgtgacacggttggtgcgtacgacccaaggtac 46173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 31340631 - 31340667
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||| |||| |||||||||||||||||||||||    
T  31340631 aaatcgtgtcacgtttggtgcgtacgacccaaggtac 31340667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 43402379 - 43402411
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaag 180  Q
    ||||||||||||| |||||||||||||||||||    
T  43402379 aaatcgtgacacgtttggtgcgtacgacccaag 43402411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 49200040 - 49200076
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||  |||||||||||||||||||||||    
T  49200040 aaatcgtgacacatttggtgcgtacgacccaaggtac 49200076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 2e-69; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 13598657 - 13598840
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||    
T  13598657 ccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctcttcaagctctccttcaaaatctgcacaagaa 13598756  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13598757 catttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtac 13598840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 29652070 - 29652253
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||  | ||    
T  29652070 ccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcttttcaagctctccttcaaaatctgcacaaaaa 29652169  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  29652170 cacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaggtac 29652253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 21536408 - 21536228
Alignment:
Q  5 aagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaaca 102  Q
    ||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||    
T  21536408 aagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaaca 21536309  T
Q  103 cttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  21536308 cttatatagcagtcttcagctgtcaaaatcgtgtcacgttt-tccaaatcggggcacgattggtgcgtacgacccaaggtac 21536228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 3281964 - 3282145
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||| ||||| |||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||    
T  3281964 ccaagagatcctcactacaaagacactcaaccataaagttacctcatttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcataagaa 3282063  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  3282064 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttc-aaatcgtggcacgattggtgcgtacgacccaaggta 3282145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 37070024 - 37070207
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  37070024 ccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatccaagtttctctctcttccagctctacttcaaaatctgcacaagaa 37070123  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||| ||||||||||||  ||||||| || || |||||||| ||||||||||||||||||||||||||||    
T  37070124 cacttatatagcagtctttagctgtcaaaattatgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaaggtac 37070207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 55 - 183
Target Start/End: Complemental strand, 49918238 - 49918111
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||    
T  49918238 ccaagtttctctctcttcaagctctacttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacattttcccaaatcgt 49918140  T
Q  155 gacacgattggtgcgtacgacccaaggta 183  Q
    ||||||||||||| |||||||||||||||    
T  49918139 gacacgattggtgtgtacgacccaaggta 49918111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 13604462 - 13604280
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||| ||  |||||||||| | ||| |||||||||||||||||||||||||| ||||||| || |||||| ||||  ||||    
T  13604462 ccaagagatcctcactacaaagatactcaaccctaaagttccctcctttgtaatccaagtttctctctctttaagctctcctccaaaatttgcacaagaa 13604363  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| || |||||||| |||||||| | |||||||||||||||||    
T  13604362 cacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatacgtacgacccaaggtac 13604280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 30476727 - 30476853
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  30476727 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 30476825  T
Q  155 gacacgattggtgcgtacgacccaaggt 182  Q
    |||||| |||||| ||||||||||||||    
T  30476826 gacacgtttggtgtgtacgacccaaggt 30476853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 28220505 - 28220633
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  28220505 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 28220603  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| || ||||||||||||||||||||    
T  28220604 gacacgttttgtgcgtacgacccaaggtac 28220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 10925140 - 10924985
Alignment:
Q  28 caaccctaaagataccttctttg-taatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| ||||| |  |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||    
T  10925140 caaccctaaagttacctcctttgattttccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatataacagtcttcagctgtc 10925042  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    |||||||||||||||||  | ||||||||||||| ||| |||||| |||||||||||    
T  10925041 aaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggta 10924985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 3 - 178
Target Start/End: Complemental strand, 26644738 - 26644561
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctactt-caaaatctgcaacaga 99  Q
    |||| ||||| |||||||||||||||  |||||||||  || || |||||||||||||||||||||||||||| ||||| ||| |||||||||||  |||    
T  26644738 ccaaaagatcttcactacaaagacactcaaccctaaaattatctcctttgtaatccaagtttctctctcttcaggctctcctttcaaaatctgcataaga 26644639  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgaccca 178  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| || |||||||| ||||||||||||||||||||||    
T  26644638 acacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattggtgcgtacgaccca 26644561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 28223700 - 28223828
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||    
T  28223700 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaattgt 28223798  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| || ||||||||||||||||||||    
T  28223799 gacacgttttgtgcgtacgacccaaggtac 28223828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 31659127 - 31658999
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||  | |||||||    
T  31659127 ccaagtttctctctcttcaagctctctctcaaaatctgcaa-agaacacttatatagcagtcttcaactgtcaaaatcgtgtcacattttaccaaatcgt 31659029  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  31659028 gacacgtttggtgcgtacgacccaaggtac 31658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 55 - 183
Target Start/End: Complemental strand, 1833411 - 1833284
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||| ||||  |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    |||||||    
T  1833411 ccaagtttctctctcttcaatctctcattcaaaatctgcaa-agaatacttatataggagtcttcagctgtcaaaatcgtgtcacgttttcgcaaatcgt 1833313  T
Q  155 gacacgattggtgcgtacgacccaaggta 183  Q
    |||||| ||||||||||| ||||||||||    
T  1833312 gacacgtttggtgcgtacaacccaaggta 1833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 55 - 183
Target Start/End: Complemental strand, 3206876 - 3206749
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |||||||| ||| |||||||||||||||| | | |||| |    
T  3206876 ccaagtttctctctcttcatgctctccttcaaaatcttcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttcccaaattg 3206779  T
Q  154 tgacacgattggtgcgtacgacccaaggta 183  Q
    || |||||||| ||||||||||||||||||    
T  3206778 tgtcacgattgatgcgtacgacccaaggta 3206749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 37503833 - 37503920
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||    
T  37503833 ccaagtttctctctcttcaacctctccttcaaaatctgcaa-agaacacttatatatcagtcttcagctgtaaaaatcgtgtcacgttt 37503920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 13316597 - 13316725
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||| | |  | |||    
T  13316597 ccaagtttctctctcttcaagctcatcttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccactcg 13316694  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  13316695 tgccacgattgatgcgtacgatccaaggtac 13316725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 3156755 - 3156635
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||  | |||  ||    
T  3156755 ccaagtttctctctcttccagctctccttcaaaatctgcaa-agaacacttatataacagtcttcagctgtcaaaattgtgttacgttttgccaaacggt 3156657  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||| ||| ||||    
T  3156656 gacacgtttggtgtgtatgacc 3156635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 44455049 - 44454920
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||| ||| |||| ||||||||||||||  |||||||||| |||| |  || || |||||||||||||| |||||||  | |||||||    
T  44455049 ccaagtttctctctctacaacctctccttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcgtgccacgttttgccaaatcgt 44454950  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| || ||||||||||||||||||||    
T  44454949 gacacgtttagtgcgtacgacccaaggtac 44454920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 47102679 - 47102569
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||  |||||||  ||||||||||||||   ||    
T  47102679 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagctctcattcaaaatctgcaaagaaa 47102580  T
Q  101 cacttatatag 111  Q
    |||||||||||    
T  47102579 cacttatatag 47102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 47098665 - 47098555
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| |||| ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||  |||||||  ||||||||||||||   ||    
T  47098665 ccaagagaacctcgctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaaaagctctcattcaaaatctgcaaagaaa 47098566  T
Q  101 cacttatatag 111  Q
    |||||||||||    
T  47098565 cacttatatag 47098555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 4552952 - 4553046
Alignment:
Q  81 cttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgac 175  Q
    |||||||||||||||   |||||||||||| ||||||||||||||||||| ||||||||||||  | ||||||||||||| ||| ||||||||||    
T  4552952 cttcaaaatctgcaaagaaacacttatataacagtcttcagctgtcaaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgac 4553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 20762561 - 20762433
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||||| || ||| |||||||||||||||| | |  |||||    
T  20762561 ccaagtttctctctcttcaagctctctttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcgaaatcgtgtcacgtttttccccaatcg 20762464  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||| ||| | |||||||    
T  20762463 tgccacgattgatgcgttcgatcaaaggtac 20762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 32889704 - 32889805
Alignment:
Q  12 cctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatat 109  Q
    |||||||||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||  || |||||||||||||| |||||   |||||||||||    
T  32889704 cctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaaaatctctacttcaaaatatgcaaagaaacacttatat 32889803  T
Q  110 ag 111  Q
    ||    
T  32889804 ag 32889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 19366144 - 19365965
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    ||||||||||||||||||||||||||  ||||||| || | ||| ||||||||||||||||||||||||        | |||||||| || |||||||||    
T  19366144 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctg 19366045  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacg 173  Q
    ||  |||||||||| |||  |||||||  |||  |||||||||||||| || || || ||||| |||||||||| ||||||    
T  19366044 cacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaagtcgtgtcacgattggtacgtacg 19365965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 3189220 - 3189137
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |||||||| ||| |||| ||||||||    
T  3189220 ccaagtttctctctcttcatgctctccttcaaaatcttcaa-agaacacttatatagcaatcttcagc-gtccaaattgtgtcacg 3189137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 3198037 - 3197954
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |||||||| ||| |||| ||||||||    
T  3198037 ccaagtttctctctcttcatgctctccttcaaaatcttcaa-agaacacttatatagcaatcttcagc-gtccaaattgtgtcacg 3197954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 9022746 - 9022655
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctg 92  Q
    |||||||| ||||||||||||||||  |||||  |||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||    
T  9022746 ccaagagaacctcactacaaagacattcaacca-aaagatacctcctttgtaaacccaagtttctctctcttcaagctctccttcaaaatctg 9022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 46064807 - 46064679
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||| |||||||| ||||||| ||| ||||| || |   ||||||||| ||| |||||||||||||||||||||||| || | ||| | |||||||    
T  46064807 ccaagtttttctctcttgaagctctccttaaaaat-tgaattggaacacttaaataacagtcttcagctgtcaaaatcgtgacatgattggccaaatcgt 46064709  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||| ||| | |||||||||||||||||    
T  46064708 gtcacggttgatacgtacgacccaaggtac 46064679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 37560149 - 37560211
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttc 119  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||    
T  37560149 caagtttctctctcttcaagctttacttcaaaatctgcaa-agaacacttatacaggagtcttc 37560211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 9476521 - 9476588
Alignment:
Q  5 aagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||| ||||||||||||||||  |||||| |||| ||||| |||||||||||||||||||||||||    
T  9476521 aagagaacctcactacaaagacattcaacccaaaagttacctcctttgtaatccaagtttctctctct 9476588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 19358680 - 19358533
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    |||| |||||||||||||||||||||  ||||||| || | ||| ||||||||||||||||||||||||        | |||||||| || |||||||||    
T  19358680 ccaaaagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctg 19358581  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||  |||||||||| |||  |||||||  |||  ||||||||||||||    
T  19358580 cacaagaacacttaaatactagtcttccactgataaaatcgtgtcacg 19358533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 19361269 - 19361122
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    |||||||||||||||||||||||||  |||||||| || | ||| |||||||||| |||||||||||||        | |||||||| || |||||||||    
T  19361269 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaatctg 19361170  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||  |||||||||| |||  |||||||  |||  ||||||||||||||    
T  19361169 cacaagaacacttaaatactagtcttccactgataaaatcgtgtcacg 19361122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 27104241 - 27104164
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctct 79  Q
    |||||||| |||||||||||||||||  |||| ||||| ||||| |||||||||||||||||||||||||  |||||||    
T  27104241 ccaagaga-cctcactacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctctaaaagctct 27104164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 22819688 - 22819870
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgt-aatccaagtttctctctcttcaagctctacttcaaaatctgcaacag- 98  Q
    |||||||| |||||||||||||||||  || ||||||| ||||| |||||| || |||||||  ||||||||||| |||| ||||||||| || |||||     
T  22819688 ccaagagaacctcactacaaagacactaaatcctaaagttacctcctttgtaaacccaagtt--tctctcttcaaactctccttcaaaatttg-aacaga 22819784  T
Q  99 aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||| || | |   |  |||| |||||||||||||||| ||| | |||| |||  ||| | | |||||||||||||||||||    
T  22819785 aacacttaaattgtaccatatagctatcaaaatcgtgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaaggtac 22819870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 193213 - 193155
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | |||||| |||||| |||||||||||||||||||||||    
T  193213 caaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtac 193155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 24202605 - 24202536
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||  ||| ||||||||||||  |||||||||| | ||| |||||||||||||||||||||||||    
T  24202605 ccaagagacactctctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 24202536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 37033636 - 37033694
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  37033636 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 37033694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 13547657 - 13547714
Alignment:
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| | ||||  | ||||||||||||| |||||||||||||||||||||||    
T  13547657 aaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtac 13547714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 13549568 - 13549625
Alignment:
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| | ||||  | ||||||||||||| |||||||||||||||||||||||    
T  13549568 aaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtac 13549625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 47703772 - 47703704
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatc-caagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| || ||||||||||||||    
T  47703772 caagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 47703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 29135847 - 29135811
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacccaaggtac 29135811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 16455464 - 16455407
Alignment:
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||| ||| | |||||||| |||| ||| |||||||||||||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtac 16455407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 19073188 - 19073256
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| | |||||||||||||||    
T  19073188 caagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 19121078 - 19121146
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| | |||||||||||||||    
T  19121078 caagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 40816653 - 40816585
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| | |||||||||||||||    
T  40816653 caagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 40816585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 6e-67; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 23799416 - 23799233
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||  ||||    
T  23799416 ccaagagatcctctctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctatccttcaaaatatgcacaagaa 23799317  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  23799316 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtac 23799233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 5702320 - 5702137
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||    
T  5702320 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaacctctccttcaaaatctgcacaagaa 5702221  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||| | |||||||||    
T  5702220 cacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaaggtac 5702137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 7412597 - 7412771
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  7412597 ccaagagatcctctctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 7412696  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| || |||||||| || ||||| | |||||||||    
T  7412697 cacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccatgattgatacgtacgacc 7412771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 4696448 - 4696305
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  4696448 ccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 4696349  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    | |||||||| | |||||||||||||||||||||||||||||||    
T  4696348 cccttatataacggtcttcagctgtcaaaatcgtgtcacgtttg 4696305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 4456285 - 4456419
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||| ||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  4456285 ccaagagatcctcactacagagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttcttcaaaatctgcacaagaa 4456384  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtg 135  Q
    |||||||||||| ||||||||||||||||||||||    
T  4456385 cacttatatagccgtcttcagctgtcaaaatcgtg 4456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 15212675 - 15212547
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||    
T  15212675 ccaagtttctctctcttcaagctctccttcaaaatctgtaa-agaacacttatatagcagtcttcagctgtcacaatcgtgtcacattttcctaaatcgt 15212577  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  15212576 gacacgtttggtgcgtacgacccaaggtac 15212547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 30143231 - 30143103
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||  | |||||||    
T  30143231 ccaagtttctctctcttcaagctctccttcaaaatctacaa-agaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttgccaaatcgt 30143133  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||| ||||    
T  30143132 gacacggttggtgcgtacgacccaaagtac 30143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 43036312 - 43036184
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||| ||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||    
T  43036312 ccaagtttctctctcttcaacctctcattcaaaatctgcaa-agaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 43036214  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||||||||||||| |||||||||    
T  43036213 gacacgtttggtgcgtacgatccaaggtac 43036184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19175596 - 19175449
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagct---ctacttcaaaatctgcaa 95  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||||||||   || |||||||| ||| |     
T  19175596 atccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctgatctccttcaaaaactgtac 19175497  T
Q  96 cagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
     |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19175496 aagaacacttatataacagtcttcagctgtcaaaatcgtatcacgttt 19175449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 33352067 - 33351911
Alignment:
Q  28 caaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| |||||||||||   ||| |||||||||||||||| | |||  ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  33352067 caaccctaaagttaccttctttgatttcccaagtttctctctcttccacctcaccttcaaaatttgcaa-agaaaacttatatagcagtcttcagctgtc 33351969  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||  | ||||| ||||||| |||||||||| ||||||||||||    
T  33351968 aaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtac 33351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 34254607 - 34254735
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||| | |  |||||    
T  34254607 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 34254704  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  34254705 tgccacgattgatgcgtacgacccaaggtac 34254735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 12702917 - 12703046
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||| || |||||| |||||||||||||||||||||| | | ||||||    
T  12702917 ccaagtttctctctcttcaagctctccttcaaaatatgcaa-agaacacttacataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcg 12703015  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||  ||||||||||||||||| ||||    
T  12703016 tgacacgtatggtgcgtacgacccaatgtac 12703046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 17982542 - 17982414
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||| | |  |||||    
T  17982542 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 17982445  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  17982444 tgccacgattgatgcgtacgatccaaggtac 17982414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 4731575 - 4731419
Alignment:
Q  28 caaccctaaagataccttctttg-taatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| ||||| |  | ||||||||||||||||||| | || ||||||||||| ||| ||||||||||||||| ||||||||||| ||    
T  4731575 caaccctaaagttacctcctttgatttttcaagtttctctctcttcaaccgctccttcaaaatctacaa-agaacacttatatagtagtcttcagctatc 4731477  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||  | ||||||||||||  ||||||| |||| ||||||||||    
T  4731476 aaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaaggtac 4731419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 19948600 - 19948728
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||| || |||||||||||||||||||| | |  |||||    
T  19948600 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 19948697  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  19948698 tgccacgattgatgcgtacgatccaaggtac 19948728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 34256783 - 34256911
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||| | |  |||||    
T  34256783 ccaagtttatctttcttcaagctctccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcg 34256880  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||||||||    
T  34256881 tgccacgattgatgcgtacgacccaaggtac 34256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 1746497 - 1746625
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||  |||||| || |||||||||||||||||||| | |  |||||    
T  1746497 ccaagtttctctctcttccagctcttcttcaaaatctgcaa-agaacacttatatagttgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatcg 1746594  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  1746595 tgccacgattgatgcgtacgatccaaggtac 1746625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 31218146 - 31218018
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||| || ||||||||||||||||| ||| ||  |||||    
T  31218146 ccaagtttctctctcttcaagctcttcttcaaaatctacaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgttttttcccaatcg 31218049  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||| || |||||||||    
T  31218048 tgtcacgattgatgcgtatgatccaaggtac 31218018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 27811167 - 27811079
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    |||| ||||||||||||| |||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27811167 ccaattttctctctcttccagctttccttcaaaatatgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgacacgtttg 27811079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 3051378 - 3051561
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||| || ||||||||||||||  |||||||||| |  || |||| || ||| |||||||||||||||||||||||  |||||||||||||    ||    
T  3051378 caagagaaccccactacaaagacactcaaccctaaagttctctcctttatagtcccaagtttctctctcttcaagctctctttcaaaatctgcatagaaa 3051477  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| | ||| ||||| ||||||| |||||||| ||| | || ||||| |||||||| ||| |||||||||| ||||    
T  3051478 cacttatatagtactctgcagctatcaaaattgtgtcacgattgccaaattcgtgtcacgattgatgcatacgacccaatgtac 3051561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 42498083 - 42498000
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||| ||||| |||||||    
T  42498083 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacagttatatagcagtcttcagc-gtcgaaatcatgtcacg 42498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 19945639 - 19945722
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || |||||||||||| ||||    
T  19945639 ccaagtttgtctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgccacg 19945722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 44303742 - 44303615
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||||| || ||| ||||||||||||| |||  |  ||||||    
T  44303742 caagtttctctctcttcaagctctctttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcgaaatcgtgtcacgattttccccaatcgt 44303645  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | ||| |||| |||||| || |||||||||    
T  44303644 gccacaattgatgcgtatgatccaaggtac 44303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 4733689 - 4733610
Alignment:
Q  62 tctctctcttcaagctctacttcaaaatctgcaaca-gaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||| |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||||||||| ||||    
T  4733689 tctctctcttcaacctctccttcaaaatctgcaaaaagaacacttatatagtagtcttcaactgtcaaaatcgtgacacg 4733610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 4743498 - 4743600
Alignment:
Q  82 ttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaagg 181  Q
    ||||||||||||||   |||||||||||||||||||||| ||||||||  ||||| ||||||  | |||| |||||||| ||| ||||||||||||| ||    
T  4743498 ttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacgg 4743597  T
Q  182 tac 184  Q
    |||    
T  4743598 tac 4743600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 10015023 - 10014920
Alignment:
Q  81 cttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    |||||||||||||||   |||||||| ||| |||||||||| ||||||||  |||||||  |||   ||||||||||||||||| ||| |||||||||||    
T  10015023 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaatcgtgacacgattgatgcatacgacccaag 10014924  T
Q  181 gtac 184  Q
    ||||    
T  10014923 gtac 10014920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 26288152 - 26288288
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    |||||||| ||| |||||||||||  |||||||| || | ||  |||||||||||||||||||||||||  ||||||| || |||||||||||  |||||    
T  26288152 caagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct--aagctcttctccaaaatctgcacaagaac 26288249  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||| |||  || ||||  |||  ||||||||||||||    
T  26288250 acttaaatactagccttccactgataaaatcgtgtcacg 26288288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 26301409 - 26301545
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    |||||||| ||| |||||||||||  |||||||| || | ||  |||||||||||||||||||||||||  ||||||| || |||||||||||  |||||    
T  26301409 caagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct--aagctcttctccaaaatctgcacaagaac 26301506  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||| |||  || ||||  |||  ||||||||||||||    
T  26301507 acttaaatactagccttccactgataaaatcgtgtcacg 26301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 26313403 - 26313539
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    |||||||| ||| |||||||||||  |||||||| || | ||  |||||||||||||||||||||||||  ||||||| || |||||||||||  |||||    
T  26313403 caagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct--aagctcttctccaaaatctgcacaagaac 26313500  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||| |||  || ||||  |||  ||||||||||||||    
T  26313501 acttaaatactagccttccactgataaaatcgtgtcacg 26313539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 19752234 - 19752148
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaa 87  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| |||||  ||||||||||||||||||  || |||| |||||||    
T  19752234 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgcgatccaagtttctctctctaaaacctctccttcaaa 19752148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 28307833 - 28307907
Alignment:
Q  17 ctacaaagacac--aaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaa 88  Q
    ||||||||||||  ||| |||||| ||||| ||||||||||| |||||||||||||||||||||||  |||||||    
T  28307833 ctacaaagacactcaactctaaagttacctcctttgtaatcctaagtttctctctcttcaagctctcattcaaaa 28307907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 1261790 - 1261721
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| |||| ||||||||||||  ||||||| || | ||| |||||||||||||||||||||||||    
T  1261790 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 1261721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 5990401 - 5990315
Alignment:
Q  3 ccaagagatcctcactacaaagacacaaccctaaagataccttctttgtaat-ccaagtttctctctcttcaagctctacttcaaaa 88  Q
    |||||||| |||||||| | | || ||||||||||| |||| |||||||| | |||||||||||||||||| |||||| ||| ||||    
T  5990401 ccaagagaacctcactaaagacactcaaccctaaagttaccgtctttgtatttccaagtttctctctcttctagctctccttaaaaa 5990315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 42435558 - 42435616
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| ||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  42435558 caaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 42435616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 4733627 - 4733586
Alignment:
Q  143 tgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  4733627 tgtcaaaatcgtgacacggttggtgcgtacgacccaaggtac 4733586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 40221343 - 40221310
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaagg 181  Q
    ||||||||||||| ||||||||||||||||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacccaagg 40221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 1345714 - 1345774
Alignment:
Q  122 ctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggt 182  Q
    ||||||||||||||||||||||    ||| ||||||| | ||| |||||||||||||||||    
T  1345714 ctgtcaaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgacccaaggt 1345774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 36979681 - 36979709
Alignment:
Q  42 ccttctttgtaatccaagtttctctctct 70  Q
    |||||||||||||||||||||||||||||    
T  36979681 ccttctttgtaatccaagtttctctctct 36979709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 3e-62; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 14520487 - 14520669
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||    
T  14520487 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 14520586  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||    
T  14520587 cacttatataggagtctccagctgtcaaaatcgtgtcacgttt-tccaaatcgtgacacgattaatgcgtacgacccaaggtac 14520669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 11916812 - 11916629
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||| ||  |||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||    
T  11916812 ccaagagatcctcactacaaagaaactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaa 11916713  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtct-aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  11916712 cacttatatagcagttttcaactgtcaaaatcgtgtcacgttt-tctcaaatcgtgatacgattggtgcgtacgacccaaggtac 11916629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 12084017 - 12083835
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||  ||||    
T  12084017 ccaagagatcctcactataaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttctagctctccttcaaaatctgcacaagaa 12083918  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  12083917 cacttatatagcagtcttcaactgtcaaaattgtgtcacgttt-tccaaatcgtgacacgattggtgcatacgacccaaggtac 12083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 19806294 - 19806167
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtg 155  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | || |||||    
T  19806294 caagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaagtcgtg 19806196  T
Q  156 acacgattggtgcgtacgacccaaggtac 184  Q
    ||||| |||||||||||||||||||||||    
T  19806195 acacgtttggtgcgtacgacccaaggtac 19806167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 42426514 - 42426642
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||    
T  42426514 ccaagtttctctcttttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgt 42426612  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||| | |||||||||||||||||||||||    
T  42426613 gacatgtttggtgcgtacgacccaaggtac 42426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 9353172 - 9352992
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||  |||| |  |||||||||||  ||||    
T  9353172 ccaagagatcctcactacaaagacacttaaccctaaagttacctcctttgtaatccaagtttctctctcttcatcctctcc--caaaatctgcacaagaa 9353075  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||| |||||||||||||  ||||||||| ||||||| || |||||||| |||||||| |  ||||||||||||||||    
T  9353074 cacttaaataccagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatatgtacgacccaaggtac 9352992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 13488092 - 13487964
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||| |||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||  | |||||||    
T  13488092 ccaagtttctctctcttctagctctccttcaaaatctgcaaaa-aacacttatataacagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgt 13487994  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  13487993 gacacgtttggtgcgtacgacccaaggtac 13487964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 42428709 - 42428829
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  42428709 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacatttatatagcagtcttcagttgtcaaaatcgtgtcaggttttcctaaatcgt 42428807  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||||||||||||    
T  42428808 gacacgtttggtgcgtacgacc 42428829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 32636712 - 32636585
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtg 155  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||  | ||||||||    
T  32636712 caagtttctctctctccaagctctccttcaaaatctgcaa-agaacacttatatagcagttttcagctgtcaaaatcatgtcacgttttcccaaatcgtg 32636614  T
Q  156 acacgattggtgcgtacgacccaaggtac 184  Q
    ||||| |||||||||| ||||||||||||    
T  32636613 acacgtttggtgcgtaagacccaaggtac 32636585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 533658 - 533538
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||| ||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  533658 ccaaatttctctctcttcaacctctccttcaaaatctgcaaaa-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 533560  T
Q  155 gacacgattggtgcgtacgacc 176  Q
    |||||| |||||||||||||||    
T  533559 gacacgtttggtgcgtacgacc 533538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 15464791 - 15464965
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||    
T  15464791 ccaagagatcctcactacaaagacactcaaccctaaagtttccttctttgtaatccaagtttctctctcttcaagctctcctccaaaatctgcacaagaa 15464890  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacc 176  Q
    |||||| |||  |||||||  |||  ||||||||| |||| || || |||||||| |||||||| | |||||||||    
T  15464891 cacttaaatactagtcttctactgataaaatcgtgccacgatt-tccaaatcgtgtcacgattgatacgtacgacc 15464965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 11181672 - 11181488
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| |||||||||||||||||  |||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  11181672 ccaagagaacctcactacaaagacactcaaccataaagttacctcctttgtaaaccaagtttctctctcttcaagctctacttcaaaaactgcaa-agaa 11181574  T
Q  101 cacttatatagcagtct---tcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    |||||||||| ||||||   |||||||| ||||  |||||||| ||| | |||| |||||||| ||| | ||||| ||||| ||||    
T  11181573 cacttatataacagtcttcatcagctgtaaaaaatgtgtcacgattgaccaaattgtgacacggttgatacgtacaacccacggta 11181488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 13239639 - 13239513
Alignment:
Q  57 aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcgtg 155  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||  | | |||||||    
T  13239639 aagtttctctctcttcaaactctacttcaaaatctgcaa-agaacacttatatagcagtcttcagc-gtcaaaattgtgtcacgttttccatcaatcgtg 13239542  T
Q  156 acacgattggtgcgtacgacccaaggtac 184  Q
     |||||||| |||||||||||||||||||    
T  13239541 tcacgattgatgcgtacgacccaaggtac 13239513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 28750934 - 28751022
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    |||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28750934 ccaagtttctctctcttcaagctctctttcaaaatctgcataagaacacttatatagcagacttcagctgtcaaaatcgtgtcacgttt 28751022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 36932188 - 36932007
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||||| |||||| ||||||||  |||||||||| | ||| ||||| ||||||||||||||||||||| |||||| || ||||| |||||  ||||    
T  36932188 ccaagagatcatcactataaagacactcaaccctaaagttccctcctttgcaatccaagtttctctctcttc-agctctcctccaaaaactgcacaagaa 36932090  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||| |||||||||||||  ||||||||| |||| || || |||| ||| |||||||| | |||||||||||||||||    
T  36932089 cacttaaataccagtcttcagctgataaaatcgtgccacgattttc-aaattgtgtcacgattgatacgtacgacccaaggtac 36932007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 37439038 - 37438907
Alignment:
Q  54 tccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtct---aaa 150  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |  ||||||| ||||||||||| | |    ||    
T  37439038 tccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcaac-atcaaaattgtgtcacgtttttttttccaa 37438941  T
Q  151 tcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||| |||||||| |||||||||||||||||||    
T  37438940 tcgtgtcacgattgatgcgtacgacccaaggtac 37438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 30683199 - 30683319
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||  | |||| |    
T  30683199 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagttttcagc-gtcaaaatcgtgtcacgttttcccaaaattg 30683296  T
Q  154 tgacacgattggtgcgtacgacc 176  Q
    || |||||||| |||||||||||    
T  30683297 tgtcacgattgatgcgtacgacc 30683319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 13342950 - 13342822
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||  ||||||||||||||||||| | |  |||||    
T  13342950 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-ctcaaaatcgtgtcacgtttttccccaatcg 13342853  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| | |||||||    
T  13342852 tgccacgattgatgcgtacgatctaaggtac 13342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 25412651 - 25412523
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||| || ||| |||||||||||||||| | |  |||||    
T  25412651 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagatgtcttctgc-gtcgaaatcgtgtcacgtttttccccaatcg 25412554  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  25412553 tgccacgattgatgcgtacgatccaaggtac 25412523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 36074323 - 36074451
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || ||||||||| ||||||| ||| ||  |||||    
T  36074323 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcatgtcacgttttttcccaatcg 36074420  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || || ||||| ||||||||| |||||||||    
T  36074421 tgccatgattgatgcgtacgatccaaggtac 36074451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 30182478 - 30182349
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt--ctaaatc 152  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||| |||||| |||||| || |||||||||||||||||||| |  |  ||||    
T  30182478 ccaagtttctctctcttcaagctctcattcaaaatctgcaa-agaacacttttatagctgtcttctgc-gtcaaaatcgtgtcacgtttttcccccaatc 30182381  T
Q  153 gtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||| |||||||| ||||||||| |||||||||    
T  30182380 gtgccacgattgatgcgtacgatccaaggtac 30182349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 17003799 - 17003689
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| ||||||||||||||||  ||||||||||| || || |||||||||||||||||||||||||  ||||||| |||||||||||||||   ||    
T  17003799 ccaagagaacctcactacaaagacattcaaccctaaagttatctcctttgtaatccaagtttctctctctcaaagctctccttcaaaatctgcaaagaaa 17003700  T
Q  101 cacttatatag 111  Q
    |||||||||||    
T  17003699 cacttatatag 17003689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 16649928 - 16650030
Alignment:
Q  82 ttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaagg 181  Q
    ||||||||||||||   ||||||||||||| |||||| ||||||||||||| |||||| |||  | ||||||||||||| ||||||||||||| ||||||    
T  16649928 ttcaaaatctgcaaagaaacacttatatagtagtctttagctgtcaaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaagg 16650027  T
Q  182 tac 184  Q
    |||    
T  16650028 tac 16650030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 535760 - 535684
Alignment:
Q  67 ctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    |||||||| |||| ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  535760 ctcttcaacctctccttcaaaatctgcaa-agaacaattatatatcagtcttcagctgtcaaaatcgtgacacgtttg 535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 31300435 - 31300341
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaa 95  Q
    |||||||| |||||||||||||||||  |||| ||||| ||||| ||||| |||||||||||||||||||  || |||| |||||||||||||||    
T  31300435 ccaagagaacctcactacaaagacactcaaccttaaagttacctcctttgcaatccaagtttctctctctaaaacctcttcttcaaaatctgcaa 31300341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 31004868 - 31004811
Alignment:
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31004868 aaaaacgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaagtac 31004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 24553367 - 24553256
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttc-aaaatctgcaacaga 99  Q
    |||||||| |||||||||||||||||  |||||| ||| ||||| ||||||||||||||||||| |||||  ||| ||| |||| |||||||||||   |    
T  24553367 ccaagagaacctcactacaaagacactcaacccttaagttacctcctttgtaatccaagtttctttctctaaaagttctccttcaaaaatctgcaaagaa 24553268  T
Q  100 acacttatatag 111  Q
    ||||||||||||    
T  24553267 acacttatatag 24553256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 16650958 - 16651029
Alignment:
Q  113 agtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||| |||  | ||||||||||||| ||||||||||||| |||||||||    
T  16650958 agtctttagctgtcaaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtac 16651029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 28832514 - 28832583
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||||||||||||||||    
T  28832514 ccaagagaacctcactacaaagacactcaactctaaagttacctcctttgtaatccaagtttctctctct 28832583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 38219659 - 38219728
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||||||||||||||||||||  ||||||| || | ||| |||||||||||||||||||||||||    
T  38219659 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 38219728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 27015133 - 27015075
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  27015133 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 27015075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42127210 - 42127123
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaa 88  Q
    |||||||| |||||||||||||| ||  |||| ||||| ||||| |||||||||||||||||||| ||||  || |||| ||||||||    
T  42127210 ccaagagaacctcactacaaagatactcaaccttaaagttacctcctttgtaatccaagtttctcactctaaaacctctccttcaaaa 42127123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7160746 - 7160665
Alignment:
Q  1 atccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaat-ccaagtttctctctcttcaagctct 79  Q
    |||||||||| ||||||||||||||||  ||||||||||| |||||  |||||||| |||| ||||||  ||||||||||||    
T  7160746 atccaagagaacctcactacaaagacactcaaccctaaagttacctcatttgtaatcccaaatttctcattcttcaagctct 7160665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10282012 - 10282080
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatc-caagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| || ||||||||||||||    
T  10282012 caagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 10282080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 5057650 - 5057592
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||  | |||| |||||||| ||| ||||||||||| |||||||    
T  5057650 caaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggtac 5057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 35387923 - 35387992
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| |||| ||||||||||||  ||||||| || | ||| ||||||||||||||||| |||||||    
T  35387923 ccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctct 35387992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 38746606 - 38746548
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| | ||  | |||| |||||||| |||||||||||||||||||||||    
T  38746606 caaaatcgtgtcatgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtac 38746548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 39468828 - 39468862
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaat 89  Q
    ||||||||||||||||||||||||| |||||||||    
T  39468828 ccaagtttctctctcttcaagctctccttcaaaat 39468862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 535705 - 535664
Alignment:
Q  143 tgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||||||| ||||||| |||||||||||||||    
T  535705 tgtcaaaatcgtgacacgtttggtgcatacgacccaaggtac 535664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 34843011 - 34843052
Alignment:
Q  122 ctgtcaaaatcgtgtcac-gtttgtctaaatcgtgacacgat 162  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  34843011 ctgtcaaaatcgtgtcactgtttgtctaaatcgtgtcacgat 34843052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 42926782 - 42926682
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcg 153  Q
    |||||||| |||||||| |||||||  | ||||||||| ||||||| |||||| |||| | ||| ||  |||||||||||||||||| ||| | ||||||    
T  42926782 ccaagtttttctctcttgaagctctcatccaaaatctg-aacagaaacacttaaatagtactctgcaagtgtcaaaatcgtgtcacgattgccaaaatcg 42926684  T
Q  154 tg 155  Q
    ||    
T  42926683 tg 42926682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 40146858 - 40146822
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  40146858 aaatcgtgacacgtttggtgagtacgacccaaggtac 40146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 117; Significance: 8e-60; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 36672 - 36490
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  36672 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 36573  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||| ||||||||||||||||||  ||||||||| ||||||| || |||||||| || |||||||||||||||||||||||||    
T  36572 cacttttatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccatgattggtgcgtacgacccaaggtac 36490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 43801 - 43619
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||||| || |||||||||||  | ||    
T  43801 ccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctcttccagctctcctccaaaatctgcacaaaaa 43702  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||| |||||||| | | |||||||||||||||    
T  43701 cacttatatagcagtattcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacatacgacccaaggtac 43619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 8e-60; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 2647537 - 2647354
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| || || ||||||| |||||||||||||||||  || |||| ||||||||||||||  ||||    
T  2647537 ccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtagtccaagtttctctctctaaaatctctccttcaaaatctgcacaagaa 2647438  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2647437 cacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 2647354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 21989165 - 21989347
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  || ||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||    
T  21989165 ccaagagatcctcactacaaagacactcaaacctaaagttacctcctttgtaatccaagtttctctcacttcaagctctccttcaaaatctgcacaagaa 21989264  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||| |||||| ||||||||||||    
T  21989265 cacttatatagcagtcttcagctgtcaaaatcgtgtcacattt-tccaaatcatgacacgattgctgcgtatgacccaaggtac 21989347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 46516144 - 46515967
Alignment:
Q  4 caagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    |||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||  ||||||  ||||||||||||||| |||||    
T  46516144 caagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct--aagctccccttcaaaatctgcaa-agaac 46516048  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| | ||||||| |||||||||||||    
T  46516047 acttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaaggt 46515967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 49091946 - 49092130
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||| ||||||| |||||||||||  |||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  49091946 ccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 49092045  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacg-tttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||| |||||||| ||||| |||||||||    
T  49092046 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtac 49092130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 33332290 - 33332107
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| ||| |||||||| ||||  |||||||||| ||||| ||||||||||||||||||| |||||  ||||||| |||||||||||||||   ||    
T  33332290 ccaagagaaccttactacaaaaacactcaaccctaaagttacctcctttgtaatccaagtttctatctctcaaagctctccttcaaaatctgcaaagaaa 33332191  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||| ||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  33332190 cactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtac 33332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 4796508 - 4796326
Alignment:
Q  3 ccaagagatcctcactacaaagacaca-accctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaac 101  Q
    ||||||||||||||||||||||||||  | ||||||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||| ||   ||||    
T  4796508 ccaagagatcctcactacaaagacactcaacctaaagttacctcctttgtaatccaagtttctctcactccaagctcttcttcaaaatctacacaggaac 4796409  T
Q  102 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||| |||| ||  ||||||||||||| |||||||||    
T  4796408 acttatatagcaatcttcaactatcaaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgatccaaggtac 4796326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 2761581 - 2761709
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  2761581 ccaagtttatctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 2761679  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  2761680 gacacgtttggtgcgtacgacccaaggtac 2761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 44847965 - 44847783
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||| ||||||||||||||||||||||||||||| |  |||||||| ||  ||||    
T  44847965 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctcttcaagctcttcaccaaaatctacacaagaa 44847866  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||| |||||||||||  ||||||||| ||||||| || |||||||| |||||||| | |||||||||||||||||    
T  44847865 cacttatatagccgtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgccacgattgatacgtacgacccaaggtac 44847783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 79645 - 79829
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||| |||||||||||||||||||||  || | ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||    
T  79645 ccaaaagatcctcactacaaagacactcaatcttaaagttacctcctttgtaatccaagtttctctctcttcaagctctccttcaaaatctgcacaagaa 79744  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcac-gtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||| ||||||| |||||||| |||||| |||||||||||  |||||| ||||||||||  ||||||||| || ||||||| ||||    
T  79745 cacatatatagtagtcttcaactgtcagaatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaatgtac 79829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 2479593 - 2479775
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||| ||||||||  |||||||||| | ||| |||||||||||||||||||||||||||||||||| || |||||||||||  ||||    
T  2479593 ccaagagatcctcactataaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctcttcaagctcttctccaaaatctgcacaagaa 2479692  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||  |||||||| |||  ||||||||| ||||||| || ||||| || || ||||| |||||||||||||||||||    
T  2479693 cacttatatactagtcttcaactgataaaatcgtgccacgttt-tccaaatcatgccatgattgatgcgtacgacccaaggtac 2479775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 18126533 - 18126405
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtct-aaatcg 153  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||    
T  18126533 ccaagtttctctctattcaagctcttcttcaaaatctgcaa-agaacacttatatatcagtctttagctgtcaaaatcgtgtcacgttt-tctcaaatcg 18126436  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| |||||||||||||||||||||||    
T  18126435 tgacacgtttggtgcgtacgacccaaggtac 18126405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 47676415 - 47676543
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||  | |||||||    
T  47676415 ccaagtttctctctcttcaagctcctcttcaaaatctgcaa-agaacacttatatatcagtcttcaactgtcaaaattgtgtcacgttttccaaaatcgt 47676513  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| |||||||||||||||||||||||    
T  47676514 gacacgtttggtgcgtacgacccaaggtac 47676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 14070112 - 14070240
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||||| || ||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||    
T  14070112 ccaagtttctctctcttcaagccctcctttaaaatcggcaa-agaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 14070210  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||||||| |||||||||||||||    
T  14070211 gacacgtttggtgcatacgacccaaggtac 14070240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 14380140 - 14380268
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||||| || ||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||    
T  14380140 ccaagtttctctctcttcaagccctcctttaaaatcggcaa-agaacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgt 14380238  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||||||| |||||||||||||||    
T  14380239 gacacgtttggtgcatacgacccaaggtac 14380268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 47674222 - 47674350
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||  | |||||||    
T  47674222 ccaagtttctctctcttcaagctcctcttcaaaatctgcaa-agaacacctatatagcagtcttcagctgtcaaaatcatgtcatgttttccaaaatcgt 47674320  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||||||||||| |||||||||||    
T  47674321 gacacgtttggtgcgtacaacccaaggtac 47674350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 23554929 - 23554801
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtc-taaatcg 153  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||  | | |||||    
T  23554929 ccaagtttctctctcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagc-gtcaaaatcgtgtcacgttttccattaatcg 23554832  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||||||| ||||    
T  23554831 tgtcacgattgatgcgtacgacccaatgtac 23554801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 1113546 - 1113417
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcg 153  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||  | ||  ||    
T  1113546 ccaagtttctctctcttcaacctcttcttcaaaatctgca-cagaaacacttatataacagtattcagctgtcaaaatcgtgtcacgttttgccaatacg 1113448  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| |||||||||||||||||||||||    
T  1113447 tgacacgtttggtgcgtacgacccaaggtac 1113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 4586050 - 4585922
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||| ||||||||| | |||| ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||  | |||||||    
T  4586050 ccaagtttttctctcttctaactctccttcaaaatctgcaa-agaacacttatataacagtctttagctgtcaaaatcgtgtcacattttcccaaatcgt 4585952  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    |||| | |||||||||||||||||||||||    
T  4585951 gacatgtttggtgcgtacgacccaaggtac 4585922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 21983541 - 21983682
Alignment:
Q  30 accctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaa 129  Q
    ||||||||| ||||| ||||||||||||||||||||||            |||||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  21983541 accctaaagttacctcctttgtaatccaagtttctctc------------acttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaa 21983628  T
Q  130 atcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  21983629 atcgtgtcacgttt-tccaaatcgtgacacaattggtgcgtacgacccaaggtac 21983682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 30025011 - 30025114
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  | |||||||    
T  30025011 ccaagtttctctctcttcaagctctcattcaaaatctgcaa-agaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgt 30025109  T
Q  155 gacac 159  Q
    |||||    
T  30025110 gacac 30025114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 26417196 - 26417074
Alignment:
Q  66 tctcttcaagctctacttcaaaatctgcaacagaa-----cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacg 160  Q
    |||||||||||||| ||||||||||||||| ||||     |||||||||||||||||||| | ||||||||||||||||| ||| | |||||||||||||    
T  26417196 tctcttcaagctcttcttcaaaatctgcaa-agaaattaacacttatatagcagtcttcaaccgtcaaaatcgtgtcacgattggccaaatcgtgacacg 26417098  T
Q  161 attggtgcgtacgacccaaggtac 184  Q
     |||||||||||||||||||||||    
T  26417097 gttggtgcgtacgacccaaggtac 26417074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 35853802 - 35853674
Alignment:
Q  57 aagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtct---aaatcg 153  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||| | |    |||||    
T  35853802 aagtttctctctcttcaagctcttcttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtcaaaatcgtgtcacgtttttttctccaatcg 35853705  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  35853704 tgccacgattgatgcgtacgatccaaggtac 35853674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 55 - 183
Target Start/End: Complemental strand, 48489320 - 48489192
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||| ||||||| |||| ||||||||||||||  |||||||||| |||| |  || || ||||||||||| ||||||||||  | |||||||    
T  48489320 ccaagtttctctatcttcaatctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcatgtcacgttttgccaaatcgt 48489221  T
Q  155 gacacgattggtgcgtacgacccaaggta 183  Q
    |||||||||||||||||| ||||||||||    
T  48489220 gacacgattggtgcgtacaacccaaggta 48489192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 48491467 - 48491339
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtg 155  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||| |||| |  || || || |||||||| ||||||||||  | ||||||||    
T  48491467 caagtttctctctcttcaacctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactatcaaaatcatgtcacgttttgccaaatcgtg 48491368  T
Q  156 acacgattggtgcgtacgacccaaggtac 184  Q
    ||||| |||||||||||||||||||||||    
T  48491367 acacggttggtgcgtacgacccaaggtac 48491339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 4538855 - 4538958
Alignment:
Q  81 cttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    |||||||||||||||   |||||||||||||||||||| |||||||||||||||||||  |||  | ||||||||||||| ||||||||||||| |||||    
T  4538855 cttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaag 4538954  T
Q  181 gtac 184  Q
    ||||    
T  4538955 gtac 4538958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 24515039 - 24515167
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||| || ||| |||||||||| ||||| | |  |||||    
T  24515039 ccaagtttctctctcttcaagctccccttcaaaatctgcaa-agaacacttatatagctgtcttctgc-gtctaaatcgtgtcgcgtttttccccaatcg 24515136  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| ||||||||| |||||||||    
T  24515137 tgccacgattgatgcgtacgatccaaggtac 24515167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 29990944 - 29990816
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    |||||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||| ||| | |  |||||    
T  29990944 ccaagtttctctctcttcaaactcaccttcaaaatctgcaa-agaacacttatatagcaatcttcagc-gtcgaaatcgtgtcacatttttccccaatcg 29990847  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||| |||||||||| ||||||||    
T  29990846 tgccacgattgatgcgtacgactcaaggtac 29990816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 4178663 - 4178536
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcgt 154  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||| |||||| || |||||||||||||||||||| | |  |||| |    
T  4178663 caagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttttatagctgtcttctgc-gtcaaaatcgtgtcacgtttttccccaatctt 4178566  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | |||||||| ||||||||| |||||||||    
T  4178565 gccacgattgatgcgtacgatccaaggtac 4178536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 31733249 - 31733361
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtg 155  Q
    ||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||       |||||||||||||||||||  | |||||||     
T  31733249 caagtttctctctcttccagcttttcttcaaaatctgcaa-agaacacttatatagcagtct-------tcaaaatcgtgtcacgttttcccaaatcgtt 31733340  T
Q  156 acacgattggtgcgtacgacc 176  Q
    ||||| |||||||||||||||    
T  31733341 acacgtttggtgcgtacgacc 31733361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 3047511 - 3047603
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatcc-aagtttctctctcttcaagctctacttcaaaatctg 92  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  3047511 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctcttaaagctcttcttcaaaatctg 3047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20284346 - 20284456
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| |||| ||||||||||||||||||||  || |||| ||||||||| |||||   ||    
T  20284346 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctctcaaaactctccttcaaaatttgcaaagaaa 20284445  T
Q  101 cacttatatag 111  Q
    |||||||||||    
T  20284446 cacttatatag 20284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 43864133 - 43864042
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatat---agcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    ||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||   ||||||||||| |||||||||| ||||||||||||    
T  43864133 ccaagtttctctctcttcaagctattcttcaaaatctacaa-agaacacttatattatagcagtcttcaactgtcaaaattgtgtcacgtttg 43864042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 2759071 - 2759131
Alignment:
Q  68 tcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaa 129  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2759071 tcttcaagctctccttcaaaatctgcaa-agaacacttatatagcagtcttcagctgtcaaa 2759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 2580647 - 2580740
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaa 95  Q
    |||||||| |||||| ||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||  || ||||||||||||||||||||    
T  2580647 ccaagagaacctcac-acaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaaaacctctacttcaaaatctgcaa 2580740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 18409023 - 18409213
Alignment:
Q  3 ccaagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    |||||||||||||||||||||||||  |||||||| || | ||| |||||||||| |||||||||||||        | |||||||| || |||||||||    
T  18409023 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctcctccaaaatctg 18409122  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||  |||||||||| |||  |||||||  |||  |||||||||||||| || || || ||||| |||||||||| |||||| | ||||||||    
T  18409123 cacgagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18409213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 23402853 - 23402784
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||    
T  23402853 ccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 47263925 - 47263997
Alignment:
Q  5 aagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaag 75  Q
    ||||||| ||||||||||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  47263925 aagagattctcactacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctcttcaag 47263997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 18413899 - 18414089
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    ||||||||||||||||||||||||||  ||||||| || | ||| ||||||||||||||||||||||||        | |||||||| || |||||||||    
T  18413899 ccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctcctccaaaatctg 18413998  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||  |||||||||| |||  |||||||   ||  ||||| |||||||| || || || ||||| |||||||||| |||||| | ||||||||    
T  18413999 cacaagaacacttaaatactagtcttccaatgataaaattgtgtcacgatt-tccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18414089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 47263996 - 47264078
Alignment:
Q  97 agaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||| || |||||||| || ||||| | |||||||||||||    
T  47263996 agaacacttatatagcagtcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcaagattgatacgtacgacccaag 47264078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 6570471 - 6570354
Alignment:
Q  67 ctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggt 166  Q
    ||||| ||||||| ||||||||| |||||   |||||||| | |  ||| ||||| |||||||| ||||||||| ||| | ||||||||||||| ||| |    
T  6570471 ctctttaagctctccttcaaaatatgcaaagaaacacttaaacaatagttttcagttgtcaaaaacgtgtcacgattggccaaatcgtgacacggttgat 6570372  T
Q  167 gcgtacgacccaaggtac 184  Q
    ||||| ||||||||||||    
T  6570371 gcgtatgacccaaggtac 6570354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 21640069 - 21640138
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||||||| ||||||||||||  ||||||| || | ||| |||||||||||||||||||||||||    
T  21640069 ccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 21640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 25767234 - 25767349
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtg 155  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||||||||| |||  |||||||   ||  |||||||||||||| || || || |||||    
T  25767234 caagtttctctctcttca-gctctccttcaaaatctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacgatt-tccaagtcgtg 25767331  T
Q  156 acacgattggtgcgtacg 173  Q
     |||||||||| ||||||    
T  25767332 tcacgattggtacgtacg 25767349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 27347745 - 27347684
Alignment:
Q  123 tgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||||| |||  | ||| ||||||||| |||||||||||||||||||||||    
T  27347745 tgtcaaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtac 27347684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 19495811 - 19495732
Alignment:
Q  105 tatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaa-atcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||  | |||||| |||||||| |||||||||||||||||||    
T  19495811 tatatatcagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtac 19495732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 21646267 - 21646336
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||||||| ||||||||||||  ||||||| || | ||| |||||||||| ||||||||||||||    
T  21646267 ccaagagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctct 21646336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 496339 - 496400
Alignment:
Q  122 ctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggta 183  Q
    ||||||||||||| ||||||||  | ||||||||||||| ||| |||||||||| |||||||    
T  496339 ctgtcaaaatcgtatcacgtttcccaaaatcgtgacacggttgatgcgtacgactcaaggta 496400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 2759009 - 2759041
Alignment:
Q  99 aacacttatatagcagtcttcagctgtcaaaat 131  Q
    |||||||||||||||||||||||||||||||||    
T  2759009 aacacttatatagcagtcttcagctgtcaaaat 2759041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 3050492 - 3050550
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| || || ||||  || |||||||| |||||||||||||||||||    
T  3050492 caaaatcgtgtcacgattttccaaatgatgtcacgattgatgcgtacgacccaaggtac 3050550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 6360479 - 6360533
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaag 180  Q
    ||||||||||||||  ||  | ||||||||||||| |||||||||||||||||||    
T  6360479 caaaatcgtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaag 6360533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 19502066 - 19502013
Alignment:
Q  56 caagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatata 110  Q
    ||||||| |||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  19502066 caagtttgtctctctttaagctctccttcaaaatctgcaa-agaacatttatata 19502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 32358403 - 32358461
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||  || || ||||| ||||||| ||||||||||||| |||||||||    
T  32358403 caaaatcgtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtac 32358461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 4512952 - 4512993
Alignment:
Q  122 ctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgatt 163  Q
    |||||||||||||||||||||| || |||||||| |||||||    
T  4512952 ctgtcaaaatcgtgtcacgtttttccaaatcgtgtcacgatt 4512993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 48408691 - 48408608
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||||||||||||||||||  ||||| ||||||||||||||  |||||||||| |||  |||||||  |||  ||||||||||||||    
T  48408691 ccaagtttctctctcttcc-gctct-cttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacg 48408608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 9189847 - 9189777
Alignment:
Q  3 ccaagagatcctcactacaaaga---cacaaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    |||||||| ||| ||||||||||   | ||||||||||| || || ||||| |||||||||||||||||||    
T  9189847 ccaagagaaccttactacaaagaacactcaaccctaaagttatctcctttgcaatccaagtttctctctct 9189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 85940 - 86082
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||  ||||    
T  85940 ccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctcacttcaagctatccttcaaaatctgcacaagaa 86039  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttt 143  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  86040 cacttatatagcagtcttcagttgtcaaaatcgtgtcacgttt 86082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 45455 - 45638
Alignment:
Q  3 ccaagagatcctcactacaaa-gaca--caaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacaga 99  Q
    ||||||||||||||||||||| ||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||  | |||||| ||||  |||    
T  45455 ccaagagatcctcactacaaaagacattcaaccctaaagttacctcctttgtaatccaagtttctctctcttcaagctcttttccaaaatttgcacaaga 45554  T
Q  100 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||| ||| || ||||||||||  ||||||||| ||||||| || |||||||| |||||||| |  ||||||||||||||||    
T  45555 acacttaaataccaatcttcagctgataaaatcgtgccacgttt-tccaaatcgtgtcacgattgatatgtacgacccaaggtac 45638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 20666 - 20822
Alignment:
Q  28 caaccctaaagataccttctttgtaatccaa-gtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtc 126  Q
    ||||||||||| ||||| |||||   ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||| |||| ||||||| ||    
T  20666 caaccctaaagttacctcctttgatttccaaagtttctctctcttctagctctccttcaaaatctgcaa-agaacacttatataacagttttcagctatc 20764  T
Q  127 aaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||||| ||||||  | ||||||||||||| || ||||||||||||||||||||    
T  20765 aaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtac 20822  T

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Target: scaffold0140 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 8257 - 8075
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctcttcaagctctacttcaaaatctgcaacagaa 100  Q
    ||||||||||||||||||||||||||  |||||||||| | ||| ||||||||||||||||||||||||||| |||||| || | ||| |||||   |||    
T  8257 ccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctcttccagctctcctccgaaaactgcacacgaa 8158  T
Q  101 cacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||| ||| |||||||||||||  |||||| || |||| || || |||||||| |||||||| | |||||||||||||||||    
T  8157 cacttaaataccagtcttcagctgataaaatcatgccacgattttc-aaatcgtgtcacgattgatacgtacgacccaaggtac 8075  T

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Target: scaffold0176 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17506 - 17651
Alignment:
Q  1 atccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctctt-caagctctacttcaaaatctgcaaca 97  Q
    ||||||||||||  ||||||||||||||  |||| ||||| ||||| || ||||||||||| ||||||||||| |||||| ||||||||||||| ||| |    
T  17506 atccaagagatctccactacaaagacactcaaccgtaaagttacctcctatgtaatccaaggttctctctctttcaagctatacttcaaaatctacaa-a 17604  T
Q  98 gaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttg 144  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  17605 gaacacttatatagcagttttcagctgtcaaaatcgtgacacgtttg 17651  T

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Target: scaffold0002 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 434422 - 434294
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ctaaatcg 153  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||| |||||| || |||||||||||| ||||||| | |  |||||    
T  434422 ccaagtttctctctcttcaagctcaccttcaaaatctgcaa-agaacacttttatagcggtcttctgc-gtcaaaatcgtgccacgtttttccccaatcg 434325  T
Q  154 tgacacgattggtgcgtacgacccaaggtac 184  Q
    || |||||||  ||||||||| |||||||||    
T  434324 tgccacgatttatgcgtacgatccaaggtac 434294  T

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Target: scaffold0491 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 11441 - 11568
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgt 154  Q
    |||||||||||||||||| | |||| ||||||||||||||  |||||||||| |||  || ||||  |||  |||||||||||||| || || | |||||    
T  11441 ccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt-tccagatcgt 11538  T
Q  155 gacacgattggtgcgtacgacccaaggtac 184  Q
    | ||||||||||||||||| ||||||||||    
T  11539 gtcacgattggtgcgtacgtcccaaggtac 11568  T

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Target: scaffold0491; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 9015 - 9099
Alignment:
Q  55 ccaagtttctctctcttcaagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    |||||||||||||||||| | |||| ||||||||||||||  |||||||||| |||  || ||||  |||  ||||||||||||||    
T  9015 ccaagtttctctctcttccaactct-cttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacg 9099  T

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Target: scaffold0491; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 9087 - 9123
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  9087 aaatcgtgtcacgattggtgcgtacgtcccaaggtac 9123  T

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Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 114507 - 114347
Alignment:
Q  28 caaccctaaagataccttctttgtaatc-caagtttctctctcttcaagctctacttcaaaatctgcaacaga----acacttatatagcagtcttcagc 122  Q
    ||||||||||| ||||| |||||   || |||||||||||||||||||||||   |||||||||||||| |||    ||||||||||||||| |||||||    
T  114507 caaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctcacattcaaaatctgcaa-agatctaacacttatatagcagccttcagc 114409  T
Q  123 tgtcaaaatcgtgtcacgtttgtc-taaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
      || ||||||||||||||||  | | ||||||| ||||| || |||||||||||||||||||    
T  114408 a-tcgaaatcgtgtcacgttttccatcaatcgtgtcacgagtgatgcgtacgacccaaggtac 114347  T

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Target: scaffold0188 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 17788 - 17641
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctc--------ttcaagctctacttcaaaatctg 92  Q
    ||||||||||||| ||||||||||||  ||||||| || | ||| ||||||||||||||||||||||||        | |||||||| ||||||||||||    
T  17788 ccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaatctg 17689  T
Q  93 caacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 140  Q
    ||  |||||||||| |||  || ||||  |||  ||||||||||||||    
T  17688 cacaagaacacttaaatactagccttccactgataaaatcgtgtcacg 17641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 23881 - 23812
Alignment:
Q  3 ccaagagatcctcactacaaagacac--aaccctaaagataccttctttgtaatccaagtttctctctct 70  Q
    ||||||||||||| ||||||||||||  ||||||| || | ||| |||||||||||||||||||||||||    
T  23881 ccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 23812  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 80850 - 80908
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| |||||||||||||||||||||||    
T  80850 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 80908  T

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Target: scaffold0286 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 11159 - 11101
Alignment:
Q  126 caaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||||||| ||  | ||||||||||||| |||||||||||||||||| ||||    
T  11159 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtac 11101  T

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Target: scaffold1519 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 779 - 668
Alignment:
Q  72 caagctctacttcaaaatctgcaacagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtctaaatcgtgacacgattggtgcgta 171  Q
    |||||||| || |||||||||||  |||||||||| |||  |||||||  |||  |||||||||||||| || || |||||||| ||| |||||| ||||    
T  779 caagctctcctccaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt-tccaaatcgtgtcacaattggtacgta 681  T
Q  172 cgacccaaggtac 184  Q
    || | ||||||||    
T  680 cgtcacaaggtac 668  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10991 - 11059
Alignment:
Q  4 caagagatcctcactacaaagaca--caaccctaaagataccttctttgtaatcc-aagtttctctctc 69  Q
    ||||||| ||||||||||||||||  ||||| ||||| ||||| ||||||| ||| |||||||||||||    
T  10991 caagagaacctcactacaaagacactcaaccataaagttacctcctttgtattccaaagtttctctctc 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 6906 - 6870
Alignment:
Q  148 aaatcgtgacacgattggtgcgtacgacccaaggtac 184  Q
    ||||||||||| | |||||||||||||||||||||||    
T  6906 aaatcgtgacatggttggtgcgtacgacccaaggtac 6870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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