View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10751_low_19 (Length: 249)
Name: NF10751_low_19
Description: NF10751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10751_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 32209079 - 32208842
Alignment:
| Q |
1 |
aatcttgttttcaaataattgctaccacgttttttgacttctaattgaagtgctgcatgaaatgcggcaatttgcatgcttatttttacaataatatata |
100 |
Q |
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| T |
32209079 |
aatcttgttttcaaataattgctaccacgttttttgacttctaattgaagtgctgcatgaaatgcggcaatttgcatgcttatttttacaataatatata |
32208980 |
T |
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| Q |
101 |
tcttatgtgtgtctcattagttatcagattttattnnnnnnntaggttaatgattgattcatatggatggaattaagaataaatgtatttaataaatctt |
200 |
Q |
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| T |
32208979 |
tcttatgtgtgtctcattagttatcagattttattaaaaaaataggttaatgattgattcatatggatggaattaagaataaatgtatttaataaatctt |
32208880 |
T |
|
| Q |
201 |
aattgattgattaatgtttttcctctctccataattca |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
32208879 |
aattgattgattaatgtttttcctctctccataattca |
32208842 |
T |
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