View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10751_low_6 (Length: 358)
Name: NF10751_low_6
Description: NF10751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10751_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 4818196 - 4818532
Alignment:
| Q |
1 |
ggaacattgacattcaacaaagaagcaacaacagataaatcaggaaaatacagtgtggagatagatggagaccatgaagatgaaacatgtgaagttattc |
100 |
Q |
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| T |
4818196 |
ggaacattgacattcaacaaagaagcaacaacagataaatcaggaaaatacagtgtggagatagatggagaccatgaagatgaaacatgtgaagttattc |
4818295 |
T |
|
| Q |
101 |
tttgcaagagtccaaggaaagattgctcagaggttgactcagaagctcacctacaacaagctgctaggatcagtgtcacaaacaacaacggaattgtgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4818296 |
tttgcaagagtccaaggaaagattgctcagaggttgactcagaagctcacctacaacaagctgctaggatcagtgtcacaaacaacaacggaattgtgtc |
4818395 |
T |
|
| Q |
201 |
cccagttcgtgctgctagccctcttggtttccttaagaaagagcgtctacctaaatgtggtgaggttctcaaagaacttgggattaatgaagatggaact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4818396 |
cccagttcgtgctgctagccctcttggtttccttaagaaagagcgtctacctaaatgtggtgaggttctcaaagaacttgggattaatgaagatggaact |
4818495 |
T |
|
| Q |
301 |
gaaaaggaggactagatagctcaaccttatgtccttt |
337 |
Q |
| |
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||||||||||||||||||||||||||||||||||||| |
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| T |
4818496 |
gaaaaggaggactagatagctcaaccttatgtccttt |
4818532 |
T |
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