View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10758_low_1 (Length: 507)
Name: NF10758_low_1
Description: NF10758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10758_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 18 - 483
Target Start/End: Original strand, 29745927 - 29746395
Alignment:
| Q |
18 |
tattctaaagttgaaagcgaattaaatgatctcaaatatggagacacagacacctgaaataggaagtaccagcagcgacgcttctatcagtcaggccaac |
117 |
Q |
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| T |
29745927 |
tattctaaagttgaaagcaaactaaattatttcaaatatggagacacagacacctcaaatatgaagtaccaacggtgacgcttctatcagtcaggccaac |
29746026 |
T |
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| Q |
118 |
aaagatgaatccaactccgtcaatgatgaattgaatagtgtattaaatgtaaataaattggacacaggagaggttgatgccggaagaagttcatttggg- |
216 |
Q |
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| T |
29746027 |
aaagatggatccaactccgtcaatgatgaattgaatagtcaattaaatgtaaataaattagacataggagatgttgatgctggaaggggttcatttggat |
29746126 |
T |
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| Q |
217 |
---attgaagaggatccttctcctattgatgacggacatttgacagttttgcaacaaaaggtatctttcataaaaattctcatgatattctattcttaag |
313 |
Q |
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||||||||| ||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29746127 |
ggaattgaagagaatccttctcctattggtgatgaacatttgacagtttcgcaacaaaaggtatctttcataaaaattctcatgatattctattcttaag |
29746226 |
T |
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| Q |
314 |
cttatacccagtcaaagaagttatgcttgttattcagctctcaagcttctttctgtatttaatatctccaaacatatgcaatatgtagaacacagaaaac |
413 |
Q |
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|||||||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||| |
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| T |
29746227 |
cttatacccagtcaaagaagttatgcttat-attcagctatcaagcttctttctatatttaatatctccaaacatatgaaatgtgtacaacacagaaaac |
29746325 |
T |
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| Q |
414 |
ttgttgaatgtttaaaaactttcttattttgtcttatgaatattgcatgtgcaaactttaaatatatggc |
483 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
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| T |
29746326 |
ttgttgaatgtttaaaaactttcttattttgtctcatgaatattgcatgtgcaaacttgaaatatatggc |
29746395 |
T |
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