View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10759_high_4 (Length: 250)
Name: NF10759_high_4
Description: NF10759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10759_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 29569918 - 29570042
Alignment:
| Q |
120 |
ttcggtagtgggcttcaaggacttaggagccaagagaaattttcatatataaataagtaggtggtggtgttctatcttaacttgtaatgtgcatattctt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29569918 |
ttcggtagtgggcttcaaggacttaggagccaagagaaattttcatatataaataagtaggtggtggtgttctatcttaacttgtaatgtgcatattctt |
29570017 |
T |
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| Q |
220 |
gtagactctcaaatattcatctctc |
244 |
Q |
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||||||||||||||||||||||||| |
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| T |
29570018 |
gtagactctcaaatattcatctctc |
29570042 |
T |
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