View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10759_high_5 (Length: 248)
Name: NF10759_high_5
Description: NF10759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10759_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 3310021 - 3309786
Alignment:
| Q |
1 |
tcatacaaacttatcataatcagcactatcttttatcaaaatcatcacaacaaaaatattttctttaaaacaaatatcaacatacaattagtttctacat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
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| T |
3310021 |
tcatacaaacttatcataatcagcactatcttttatcaaaatcatcacaacaaaaatattttctttaaaacaaat--caacatacaattattttctacat |
3309924 |
T |
|
| Q |
101 |
aagaactacataactttgaattttccatcacactatgaaatacataaaagcaaaagattcggctagagcgtcactatgcatgcatacacacttgcttcag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
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| T |
3309923 |
aagaactacataactttgaattttccatcacactatgaaatacataaaagcaaaagattcggcaagagcgtcactatgcatgcataaccacttgcttcag |
3309824 |
T |
|
| Q |
201 |
tgttctaccaacaccaggggtcctctctgtctatctct |
238 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
3309823 |
tgttctaccaacaccaggggtcctctctgtctatctct |
3309786 |
T |
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