View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10759_low_37 (Length: 228)
Name: NF10759_low_37
Description: NF10759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10759_low_37 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 46626659 - 46626886
Alignment:
| Q |
1 |
atggaaacatatagagggaaagtgaaaaggagtgactcttatttcacagtcaatcttgtgtgatttatagtctgcactctactctatctcgtttgtggtg |
100 |
Q |
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| T |
46626659 |
atggaaacatatagagggaaagtgaaaaggagtgactcttatttcacagtcaaccttgtgtgatttatagtctgcactctactctatctcgtttgtggtg |
46626758 |
T |
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| Q |
101 |
tccacagcaaaataagacttgaagttaaaaagattattgtcacataaattgacagaaaaaccagaaacaatagtttatgactttatgtcattttgtcagg |
200 |
Q |
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| T |
46626759 |
tcaacagcaaaataagacttgaagttaaaaagattattgtcacataaattgaccgaaaaaccagaaacaatagtttatgactttatgtcattttgtcagg |
46626858 |
T |
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| Q |
201 |
gtaagagaagtatgcactacaaatctgc |
228 |
Q |
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| T |
46626859 |
gtaagagaagtatgcactacaaatctgc |
46626886 |
T |
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