View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10760_low_14 (Length: 262)
Name: NF10760_low_14
Description: NF10760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10760_low_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 262
Target Start/End: Original strand, 36610921 - 36611183
Alignment:
| Q |
11 |
cagagagagcacaacacaaaaataacataacaaattgtgaaagtgtgctagaacaagctaatgatacgcatgattttgatggttttgaattaaattgatt |
110 |
Q |
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| T |
36610921 |
cagagagagcacaacacaaaaataacataacaaattgtgaaagtgtgctagaacaagctaatgatacgcatgattttgatggttttgaattaaattgatt |
36611020 |
T |
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| Q |
111 |
cgattaaaattgaggtt---------gaag--agatataaattgtgtttcaatatttttactatgaaagctaaaacttagacgaatttcttagttcaatg |
199 |
Q |
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| T |
36611021 |
cgattaaaattgaggtttttttttttgacggaaaaaaaaaattgtgtttcaatatttttactatgaaagctaaaacttagacgaatttcttagttcaatg |
36611120 |
T |
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| Q |
200 |
caataacttcttttattactcttaatcaaactgaagtttggatggaaaacaattttgacttgc |
262 |
Q |
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| T |
36611121 |
caataacttcttttattactcttaatcaaactgaactttggatggaaaacaattttgacttgc |
36611183 |
T |
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