View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10760_low_17 (Length: 254)

Name: NF10760_low_17
Description: NF10760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10760_low_17
NF10760_low_17
[»] chr8 (39 HSPs)
chr8 (1-229)||(15047035-15047263)
chr8 (128-234)||(4809102-4809208)
chr8 (149-237)||(44578165-44578253)
chr8 (123-222)||(33299004-33299103)
chr8 (128-234)||(2656008-2656114)
chr8 (128-234)||(37565719-37565825)
chr8 (128-234)||(43889964-43890070)
chr8 (128-235)||(27746955-27747061)
chr8 (135-234)||(34611942-34612041)
chr8 (128-234)||(11464309-11464415)
chr8 (128-234)||(23851334-23851440)
chr8 (128-235)||(11725817-11725924)
chr8 (128-235)||(43135419-43135526)
chr8 (128-234)||(9619197-9619303)
chr8 (128-234)||(14906763-14906869)
chr8 (128-238)||(28239975-28240085)
chr8 (149-235)||(42447888-42447974)
chr8 (129-239)||(43192188-43192298)
chr8 (128-235)||(29777356-29777463)
chr8 (127-235)||(33896219-33896331)
chr8 (149-235)||(9072855-9072941)
chr8 (128-234)||(9498439-9498545)
chr8 (128-234)||(11197021-11197127)
chr8 (149-235)||(32724342-32724428)
chr8 (127-229)||(33342577-33342679)
chr8 (149-235)||(35580593-35580679)
chr8 (128-220)||(44099776-44099868)
chr8 (128-218)||(11267162-11267252)
chr8 (185-235)||(19876347-19876397)
chr8 (123-215)||(16794448-16794540)
chr8 (128-235)||(39152982-39153090)
chr8 (128-235)||(8441322-8441428)
chr8 (150-231)||(15597030-15597111)
chr8 (171-235)||(17949372-17949434)
chr8 (128-200)||(3240540-3240611)
chr8 (128-219)||(24186519-24186609)
chr8 (155-198)||(43431913-43431956)
chr8 (94-123)||(9637194-9637223)
chr8 (94-123)||(17426995-17427024)
[»] chr6 (35 HSPs)
chr6 (128-235)||(33110741-33110848)
chr6 (128-235)||(10228809-10228916)
chr6 (128-234)||(16419289-16419395)
chr6 (128-235)||(4088590-4088697)
chr6 (128-235)||(4984407-4984514)
chr6 (128-235)||(8027958-8028065)
chr6 (128-235)||(17237126-17237233)
chr6 (128-234)||(16892656-16892762)
chr6 (128-234)||(17334884-17334990)
chr6 (134-235)||(12653074-12653175)
chr6 (128-235)||(12059613-12059720)
chr6 (128-235)||(35001720-35001827)
chr6 (128-238)||(28634953-28635063)
chr6 (128-235)||(23947157-23947265)
chr6 (164-235)||(4468688-4468759)
chr6 (159-234)||(7880973-7881048)
chr6 (128-234)||(8497098-8497205)
chr6 (128-235)||(33740418-33740525)
chr6 (127-235)||(8196246-8196354)
chr6 (128-234)||(25064367-25064473)
chr6 (168-231)||(7027997-7028060)
chr6 (159-234)||(7875915-7875990)
chr6 (129-229)||(25337701-25337801)
chr6 (169-235)||(20619597-20619663)
chr6 (128-235)||(30608375-30608481)
chr6 (164-239)||(34489347-34489421)
chr6 (196-234)||(12165970-12166008)
chr6 (140-235)||(1704004-1704098)
chr6 (185-235)||(4351902-4351952)
chr6 (129-198)||(7976048-7976117)
chr6 (94-123)||(19164838-19164867)
chr6 (94-123)||(31297093-31297122)
chr6 (95-123)||(12170742-12170770)
chr6 (128-212)||(29319737-29319821)
chr6 (149-217)||(33543485-33543553)
[»] chr4 (51 HSPs)
chr4 (128-235)||(25274025-25274132)
chr4 (131-235)||(10359391-10359495)
chr4 (128-235)||(9528717-9528824)
chr4 (128-235)||(44947554-44947661)
chr4 (149-235)||(43153875-43153961)
chr4 (128-235)||(38706550-38706657)
chr4 (128-235)||(51318127-51318234)
chr4 (136-235)||(52097764-52097863)
chr4 (128-234)||(9645364-9645470)
chr4 (128-234)||(53616490-53616596)
chr4 (128-235)||(4644000-4644107)
chr4 (128-235)||(34024278-34024385)
chr4 (129-235)||(1532050-1532156)
chr4 (149-235)||(10389615-10389701)
chr4 (149-238)||(12265601-12265690)
chr4 (164-235)||(868304-868376)
chr4 (159-235)||(6972952-6973028)
chr4 (149-229)||(27593690-27593770)
chr4 (128-235)||(45227881-45227988)
chr4 (128-230)||(43444539-43444641)
chr4 (128-230)||(49410370-49410472)
chr4 (164-234)||(50766388-50766458)
chr4 (129-234)||(2115429-2115534)
chr4 (149-229)||(18138775-18138855)
chr4 (163-235)||(32952626-32952698)
chr4 (149-229)||(49125988-49126068)
chr4 (128-235)||(21090284-21090391)
chr4 (128-235)||(56199238-56199345)
chr4 (128-222)||(9284066-9284160)
chr4 (128-239)||(35261331-35261441)
chr4 (164-234)||(47417805-47417875)
chr4 (149-231)||(49680683-49680765)
chr4 (164-229)||(1931627-1931692)
chr4 (128-234)||(20569398-20569506)
chr4 (185-234)||(29965778-29965827)
chr4 (130-235)||(37188437-37188542)
chr4 (128-221)||(46990971-46991064)
chr4 (128-228)||(3336004-3336104)
chr4 (155-222)||(35964843-35964910)
chr4 (185-235)||(14183944-14183993)
chr4 (194-235)||(31381578-31381619)
chr4 (185-217)||(7273711-7273743)
chr4 (91-123)||(56040430-56040462)
chr4 (146-241)||(40068746-40068840)
chr4 (94-123)||(2521072-2521101)
chr4 (202-235)||(8009275-8009308)
chr4 (94-123)||(26633458-26633487)
chr4 (202-239)||(28834164-28834201)
chr4 (94-123)||(56156435-56156464)
chr4 (94-126)||(35964750-35964782)
chr4 (94-126)||(47417945-47417977)
[»] chr5 (41 HSPs)
chr5 (127-235)||(43148859-43148967)
chr5 (134-235)||(781520-781621)
chr5 (128-235)||(7247091-7247198)
chr5 (149-235)||(19259673-19259759)
chr5 (129-235)||(34881850-34881955)
chr5 (134-235)||(18677311-18677412)
chr5 (127-235)||(4954124-4954232)
chr5 (128-235)||(27266699-27266806)
chr5 (128-231)||(27752061-27752164)
chr5 (128-235)||(30298976-30299083)
chr5 (128-235)||(7241915-7242023)
chr5 (128-235)||(3271242-3271349)
chr5 (134-229)||(15571045-15571140)
chr5 (135-235)||(16981422-16981524)
chr5 (127-235)||(28235717-28235827)
chr5 (128-235)||(41184280-41184387)
chr5 (149-235)||(2057699-2057785)
chr5 (155-235)||(10649776-10649856)
chr5 (155-235)||(21060150-21060230)
chr5 (149-234)||(19280807-19280891)
chr5 (128-229)||(20257536-20257637)
chr5 (155-235)||(35475205-35475285)
chr5 (149-229)||(42886616-42886696)
chr5 (155-235)||(30298339-30298421)
chr5 (149-235)||(7150196-7150282)
chr5 (164-230)||(26578389-26578455)
chr5 (134-223)||(11768143-11768232)
chr5 (128-216)||(7612898-7612986)
chr5 (128-235)||(7886779-7886885)
chr5 (128-235)||(22978764-22978871)
chr5 (164-235)||(42580020-42580091)
chr5 (185-235)||(43261716-43261766)
chr5 (171-239)||(41418605-41418673)
chr5 (128-211)||(43008155-43008238)
chr5 (203-238)||(6446001-6446036)
chr5 (129-221)||(13468744-13468835)
chr5 (127-212)||(11976794-11976878)
chr5 (128-213)||(13422077-13422161)
chr5 (136-212)||(25980302-25980377)
chr5 (94-126)||(37483320-37483352)
chr5 (136-212)||(38597942-38598017)
[»] scaffold0495 (1 HSPs)
scaffold0495 (128-235)||(5528-5635)
[»] chr1 (57 HSPs)
chr1 (128-235)||(25406124-25406231)
chr1 (128-235)||(38520375-38520482)
chr1 (128-235)||(45425906-45426013)
chr1 (128-230)||(11709547-11709649)
chr1 (128-234)||(5701394-5701500)
chr1 (128-234)||(19715735-19715841)
chr1 (136-241)||(18569159-18569264)
chr1 (155-235)||(30818218-30818298)
chr1 (134-230)||(50271986-50272082)
chr1 (128-235)||(9687045-9687152)
chr1 (128-235)||(40880853-40880960)
chr1 (127-234)||(50148505-50148612)
chr1 (128-235)||(51871997-51872104)
chr1 (128-230)||(7997928-7998030)
chr1 (150-235)||(5324420-5324505)
chr1 (128-235)||(50165939-50166046)
chr1 (128-235)||(51868485-51868592)
chr1 (128-234)||(19723448-19723554)
chr1 (149-235)||(28035273-28035359)
chr1 (128-234)||(33291258-33291364)
chr1 (128-235)||(7342856-7342963)
chr1 (149-235)||(3871542-3871628)
chr1 (128-234)||(20266437-20266543)
chr1 (128-231)||(9172628-9172731)
chr1 (128-231)||(9180610-9180713)
chr1 (128-235)||(34519262-34519369)
chr1 (128-235)||(45805669-45805775)
chr1 (131-229)||(7311949-7312047)
chr1 (128-231)||(11454073-11454178)
chr1 (128-234)||(32676975-32677076)
chr1 (128-234)||(35584462-35584564)
chr1 (129-238)||(39927396-39927505)
chr1 (149-234)||(40646809-40646894)
chr1 (127-235)||(9919523-9919630)
chr1 (162-229)||(14545657-14545724)
chr1 (127-210)||(48217596-48217679)
chr1 (128-230)||(27872876-27872978)
chr1 (149-235)||(33817029-33817115)
chr1 (149-235)||(33876499-33876585)
chr1 (128-229)||(41081544-41081645)
chr1 (127-227)||(31130432-31130532)
chr1 (135-234)||(30879210-30879309)
chr1 (164-235)||(39987522-39987592)
chr1 (149-231)||(27914965-27915047)
chr1 (127-214)||(31836989-31837076)
chr1 (149-229)||(48365627-48365707)
chr1 (129-198)||(19061071-19061140)
chr1 (128-213)||(47133051-47133135)
chr1 (134-213)||(32679007-32679085)
chr1 (94-128)||(24597109-24597143)
chr1 (200-234)||(31836941-31836975)
chr1 (94-123)||(3228548-3228577)
chr1 (94-123)||(21687654-21687683)
chr1 (128-177)||(27456667-27456716)
chr1 (128-213)||(37720009-37720093)
chr1 (136-177)||(39888365-39888406)
chr1 (134-238)||(28053583-28053686)
[»] chr3 (44 HSPs)
chr3 (127-235)||(25631365-25631473)
chr3 (128-235)||(39917238-39917345)
chr3 (128-235)||(49552064-49552171)
chr3 (128-234)||(25162564-25162670)
chr3 (127-235)||(29503588-29503696)
chr3 (128-231)||(36906253-36906356)
chr3 (128-231)||(38854876-38854979)
chr3 (128-238)||(22803154-22803264)
chr3 (128-230)||(44907239-44907341)
chr3 (149-234)||(12116226-12116311)
chr3 (149-234)||(17237933-17238018)
chr3 (159-235)||(4178692-4178768)
chr3 (128-231)||(3848759-3848862)
chr3 (128-230)||(32607601-32607703)
chr3 (128-235)||(46934769-46934873)
chr3 (159-235)||(50611289-50611365)
chr3 (128-234)||(35499040-35499144)
chr3 (131-230)||(42719649-42719748)
chr3 (128-235)||(46178695-46178802)
chr3 (129-235)||(30648560-30648666)
chr3 (185-234)||(2342591-2342640)
chr3 (134-234)||(14464638-14464738)
chr3 (134-222)||(21488233-21488321)
chr3 (164-229)||(36734569-36734634)
chr3 (127-235)||(21916600-21916708)
chr3 (133-239)||(25849932-25850038)
chr3 (185-230)||(51202151-51202196)
chr3 (164-217)||(37169374-37169427)
chr3 (128-200)||(50194195-50194267)
chr3 (129-235)||(4711604-4711709)
chr3 (128-177)||(51628988-51629037)
chr3 (94-126)||(38859922-38859954)
chr3 (136-235)||(44959841-44959939)
chr3 (127-177)||(6903105-6903155)
chr3 (159-229)||(31794203-31794272)
chr3 (128-198)||(43017046-43017116)
chr3 (94-123)||(953332-953361)
chr3 (94-123)||(19339447-19339476)
chr3 (94-123)||(23799735-23799764)
chr3 (128-213)||(27856309-27856393)
chr3 (129-178)||(30293348-30293397)
chr3 (94-123)||(40487597-40487626)
chr3 (94-123)||(46304308-46304337)
chr3 (136-212)||(40487470-40487545)
[»] chr7 (49 HSPs)
chr7 (128-235)||(32684798-32684905)
chr7 (129-235)||(17222841-17222947)
chr7 (127-235)||(22927709-22927817)
chr7 (128-235)||(42311410-42311515)
chr7 (128-235)||(433531-433638)
chr7 (155-234)||(1448697-1448776)
chr7 (128-233)||(26492497-26492602)
chr7 (127-235)||(13592348-13592456)
chr7 (129-229)||(35261433-35261533)
chr7 (128-235)||(48208030-48208138)
chr7 (128-235)||(7640615-7640722)
chr7 (135-238)||(31235631-31235734)
chr7 (128-234)||(2843081-2843187)
chr7 (128-234)||(34773842-34773948)
chr7 (149-235)||(35496036-35496122)
chr7 (128-230)||(46822150-46822252)
chr7 (128-235)||(26583839-26583947)
chr7 (128-231)||(20116716-20116818)
chr7 (128-235)||(23085651-23085758)
chr7 (128-235)||(23786705-23786812)
chr7 (128-235)||(35667072-35667179)
chr7 (128-235)||(45198873-45198980)
chr7 (127-229)||(20083474-20083576)
chr7 (123-229)||(32521764-32521870)
chr7 (128-235)||(1485096-1485204)
chr7 (164-235)||(19560128-19560199)
chr7 (128-235)||(21266520-21266627)
chr7 (159-235)||(6559007-6559083)
chr7 (159-235)||(23425244-23425320)
chr7 (155-235)||(42066929-42067009)
chr7 (155-229)||(17499548-17499622)
chr7 (155-229)||(17553592-17553666)
chr7 (128-234)||(46339185-46339291)
chr7 (146-238)||(6002156-6002246)
chr7 (149-229)||(46818279-46818360)
chr7 (186-235)||(14627777-14627826)
chr7 (171-234)||(17611240-17611303)
chr7 (136-213)||(38798928-38799004)
chr7 (200-235)||(42408492-42408527)
chr7 (94-125)||(46244038-46244069)
chr7 (149-219)||(27341691-27341760)
chr7 (94-128)||(42978876-42978910)
chr7 (94-128)||(42979049-42979083)
chr7 (128-222)||(43369614-43369707)
chr7 (94-123)||(4999805-4999834)
chr7 (149-198)||(5348473-5348522)
chr7 (94-123)||(12141094-12141123)
chr7 (94-123)||(46821528-46821557)
chr7 (94-123)||(48061697-48061726)
[»] chr2 (48 HSPs)
chr2 (128-235)||(8806000-8806107)
chr2 (128-235)||(9986182-9986289)
chr2 (128-234)||(27248991-27249097)
chr2 (127-231)||(8971467-8971571)
chr2 (123-235)||(32913374-32913486)
chr2 (128-235)||(84021-84128)
chr2 (160-231)||(4192975-4193046)
chr2 (128-235)||(41431162-41431269)
chr2 (129-231)||(32678952-32679053)
chr2 (150-235)||(2808334-2808419)
chr2 (127-235)||(4228256-4228365)
chr2 (129-234)||(38575326-38575431)
chr2 (135-235)||(7015558-7015658)
chr2 (127-231)||(27477286-27477390)
chr2 (159-235)||(34600348-34600424)
chr2 (154-235)||(33229006-33229087)
chr2 (136-235)||(21570256-21570355)
chr2 (128-235)||(40659772-40659879)
chr2 (128-231)||(3725318-3725421)
chr2 (128-235)||(17319454-17319561)
chr2 (128-235)||(27949560-27949667)
chr2 (169-235)||(6173766-6173832)
chr2 (149-235)||(45128338-45128424)
chr2 (127-235)||(41712628-41712736)
chr2 (128-235)||(20046922-20047029)
chr2 (128-235)||(25087171-25087277)
chr2 (185-234)||(36234143-36234192)
chr2 (128-235)||(40625897-40626004)
chr2 (157-222)||(459144-459209)
chr2 (128-231)||(22421866-22421969)
chr2 (159-239)||(37613997-37614077)
chr2 (128-199)||(31580495-31580566)
chr2 (123-230)||(37994422-37994528)
chr2 (171-229)||(9374450-9374508)
chr2 (127-213)||(30399889-30399974)
chr2 (94-125)||(17319590-17319621)
chr2 (164-235)||(37876503-37876573)
chr2 (137-202)||(3268684-3268749)
chr2 (94-123)||(4903933-4903962)
chr2 (128-229)||(7646617-7646717)
chr2 (94-123)||(31193124-31193153)
chr2 (136-177)||(32190854-32190895)
chr2 (94-123)||(38445449-38445478)
chr2 (199-235)||(3269022-3269058)
chr2 (199-235)||(3269581-3269617)
chr2 (199-235)||(3270140-3270176)
chr2 (91-123)||(17994505-17994537)
chr2 (127-183)||(30420855-30420911)
[»] scaffold0311 (1 HSPs)
scaffold0311 (164-235)||(8821-8892)
[»] scaffold0146 (1 HSPs)
scaffold0146 (149-234)||(16181-16266)
[»] scaffold0014 (1 HSPs)
scaffold0014 (167-235)||(201252-201320)
[»] scaffold0022 (1 HSPs)
scaffold0022 (128-235)||(83276-83385)
[»] scaffold0426 (1 HSPs)
scaffold0426 (149-235)||(6435-6521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (155-235)||(361666-361746)
[»] scaffold0445 (1 HSPs)
scaffold0445 (136-212)||(1490-1565)
[»] scaffold0088 (1 HSPs)
scaffold0088 (94-235)||(50899-51043)
[»] scaffold0002 (1 HSPs)
scaffold0002 (184-222)||(454056-454094)
[»] scaffold0136 (1 HSPs)
scaffold0136 (94-123)||(38333-38362)
[»] scaffold0009 (1 HSPs)
scaffold0009 (128-213)||(57948-58032)


Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15047263 - 15047035
Alignment:
Q  1 ttaatattttacaaaataacacaattgcaataaacaatacttcacgagaaccttgtgaaatgtattttaaatggtatacctgctctacccttgtttttac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  15047263 ttaatattttacaaaataacacaattgcaataaacaatacttcacgagaaccttgtgaaatgtattctaaatggtatacctgctctacccctgtttttac 15047164  T
Q  101 aaaaacaaaacgatattcattcaaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaa 200  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  15047163 aaaaacaaaacgatattcattcaaatcgtaaaagatgaatctgcgaacaaacttacaacattcaagttaatagcatataacggtataatgcctacaaaaa 15047064  T
Q  201 tatatgataaaattaaagtgaccggaata 229  Q
    ||||||||||||||||||| | |||||||    
T  15047063 tatatgataaaattaaagtaatcggaata 15047035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 4809208 - 4809102
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4809208 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 4809109  T
Q  228 tatccat 234  Q
    |||||||    
T  4809108 tatccat 4809102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 44578253 - 44578165
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtc 237  Q
    ||||||||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44578253 aaacttacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtc 44578165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 33299103 - 33299004
Alignment:
Q  123 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  33299103 aaattgtaaatgatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctataaaaatatatgataaaattaaagtgac 33299004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 2656114 - 2656008
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  2656114 gtaaatgatgaatttgcgaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 2656015  T
Q  228 tatccat 234  Q
    |||||||    
T  2656014 tatccat 2656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 37565719 - 37565825
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||||    
T  37565719 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaatcaaagtgaccggaa 37565818  T
Q  228 tatccat 234  Q
    |||||||    
T  37565819 tatccat 37565825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 43889964 - 43890070
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||| ||| | ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43889964 gtaaaggatgaatctgcaaacaaaatcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 43890063  T
Q  228 tatccat 234  Q
    |||||||    
T  43890064 tatccat 43890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 27746955 - 27747061
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||||||| |||||||||| ||||||||||||||| |||  |||||||||||||||||||||||| |||| |||||||||||||    
T  27746955 gtaaatgatgaatctgcaaataaatttacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgat-aaataaaagtgaccggaa 27747053  T
Q  228 tatccatg 235  Q
    || |||||    
T  27747054 tacccatg 27747061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 34612041 - 34611942
Alignment:
Q  135 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||| ||| || ||||| |||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34612041 atgaatctgcgaacaaactcacaacatccaagttaatagcatataacaagataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 34611942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 11464415 - 11464309
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| | | || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11464415 gtaaaggatgaatctacgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 11464316  T
Q  228 tatccat 234  Q
    |||||||    
T  11464315 tatccat 11464309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 23851334 - 23851440
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||| ||| ||| || ||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||| |||| ||    
T  23851334 gtaaaagataaatctgcgaacaaactcacaacatctaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagttaccgaaa 23851433  T
Q  228 tatccat 234  Q
    |||||||    
T  23851434 tatccat 23851440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 11725924 - 11725817
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||     
T  11725924 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccggag 11725825  T
Q  228 tatccatg 235  Q
    ||||||||    
T  11725824 tatccatg 11725817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 43135419 - 43135526
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || | ||| |||||||| ||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  43135419 gtaaatgatgaatttgcgaacatactcacaacatccaagttaataacatataacggcataatgcctacgaaaatatatgataaaattaaagtgaccagaa 43135518  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  43135519 tatacatg 43135526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 9619197 - 9619303
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  9619197 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatacttacaaaaatatatgatgaaattaaagtgaccggaa 9619296  T
Q  228 tatccat 234  Q
    |||||||    
T  9619297 tatccat 9619303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 14906763 - 14906869
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  14906763 gtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 14906862  T
Q  228 tatccat 234  Q
    |||||||    
T  14906863 tatccat 14906869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 28240085 - 28239975
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| ||||||||||||||| |||| |||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  28240085 gtaaaggatgaatctgtgaacaaactcacagcatctaagttaatagaatataacggcataatgcttacaaaaataaatgataaaattaaagtgaccggaa 28239986  T
Q  228 tatccatgtct 238  Q
    || ||||||||    
T  28239985 tacccatgtct 28239975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 42447888 - 42447974
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  42447888 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgtctggaatattcatg 42447974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 43192188 - 43192298
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| | |||||| ||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||| ||||||    
T  43192188 taaaggatgaatctgcgaacaaactcagaacatccaagttaatagcatataacggcataatggatacaaaaatatatgataaaattaaagtgatcggaat 43192287  T
Q  229 atccatgtctc 239  Q
    || ||||||||    
T  43192288 attcatgtctc 43192298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 29777463 - 29777356
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||| |||||||||||||||| |||||||| |||||||    
T  29777463 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacgacataatgcctccaaaaatatatgataatattaaagtcaccggaa 29777364  T
Q  228 tatccatg 235  Q
    ||||||||    
T  29777363 tatccatg 29777356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 33896331 - 33896219
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatat----gataaaattaaagtgac 222  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| || | |||||||||||||||||||||    |||||||||||||| ||    
T  33896331 tgtaaaggatgaatctgcgaaaaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgatagataaaattaaagtcac 33896232  T
Q  223 cggaatatccatg 235  Q
    |||||||||||||    
T  33896231 cggaatatccatg 33896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 9072941 - 9072855
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  9072941 aaactcacagcatccaagttaatagcatataacggaataatgcatacaaaaatatatgataaaattaaagtcatcggaatatccatg 9072855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 9498439 - 9498545
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||| ||||    
T  9498439 gtaaaggatgaatctgtgaacaaactcacagcatccaagttaatagcatataatggcataatgcctacaaaaatatatgatgaaattaaagtgacaggaa 9498538  T
Q  228 tatccat 234  Q
    |||||||    
T  9498539 tatccat 9498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 11197127 - 11197021
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||| ||| || ||| ||||| ||| |||| ||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||| |||||    
T  11197127 gtaaatgataaatctgtaaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatataataaaattaaagtgatcggaa 11197028  T
Q  228 tatccat 234  Q
    |||||||    
T  11197027 tatccat 11197021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 32724342 - 32724428
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| |||||||||| |||| |||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32724342 aaactcacaacatccaagttaatagtatataacgacataatgcctacaaaaatataagataagattaaagtgaccggaatatccatg 32724428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 33342679 - 33342577
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| ||| |||  ||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||    
T  33342679 tgtaaatgatgaatctgcgaacaaactcacagcattcaagttaatagcatataacggcataatgcctacaaatatatatgataaaattaaagtgacctga 33342580  T
Q  227 ata 229  Q
    |||    
T  33342579 ata 33342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 35580679 - 35580593
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| || |||||||| |||||||| ||| | || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35580679 aaactcactacatctaaattaatagcgtataatggcataatgcctacaaaaatatatgataaaactaaagtgaccggaatatccatg 35580593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 44099776 - 44099868
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtg 220  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  44099776 gtaaaggatgaatctgctaacaaactcacaacatccaagttaatagcatataacgacataatgcatacaaaaatatatgataaaattaaagtg 44099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 11267252 - 11267162
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaag 218  Q
    ||||| ||||||  ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  11267252 gtaaaggatgaaactgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaag 11267162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 19876397 - 19876347
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19876397 ataatgcctacaaaaatatatgatcaaattaaagtgaccggaatatccatg 19876347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 16794540 - 16794448
Alignment:
Q  123 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaatta 215  Q
    |||| ||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||| |||  |||||| ||||||||||||||||||||||||    
T  16794540 aaatagtaaaggatgaatctgcgaacaaactcacaacatccaagttaataccatataacgtcataatgtctacaaaaatatatgataaaatta 16794448  T

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Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 39152982 - 39153090
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaa-atatatgataaaattaaagtgaccgga 226  Q
    ||||| ||||||| ||| || |||||   ||||||||||||||||||| || ||   ||||||||||||||| |||||||||||||||||||||| ||||    
T  39152982 gtaaaggatgaatctgcgaacaaactcttaacatctaagttaatagcacataacaacataatgcctacaaaaaatatatgataaaattaaagtgatcgga 39153081  T
Q  227 atatccatg 235  Q
    ||| |||||    
T  39153082 atacccatg 39153090  T

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Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 8441428 - 8441322
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    |||||||||||||||||||||||||| | | ||||||| |||||||||||  ||| || ||| ||| |||| | |||||||||||||||||| | |||||    
T  8441428 gtaaaagatgaatttgcaaataaactcatatcatctaaattaatagcatacaacgataaaatacctgcaaata-atatgataaaattaaagttatcggaa 8441330  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  8441329 tattcatg 8441322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 15597030 - 15597111
Alignment:
Q  150 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 231  Q
    |||||||||||||  ||||||||||||||  ||  ||||||| ||||||| ||||||| |||||||||||||||| ||||||    
T  15597030 aacttacaacatccgagttaatagcatatatcgacataatgcatacaaaagtatatgagaaaattaaagtgaccgaaatatc 15597111  T

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Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 17949434 - 17949372
Alignment:
Q  171 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| || | ||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  17949434 tagcatataacagcataatgcctacaaa--tatatgataaaattaaagtgaccgtaatatccatg 17949372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 3240611 - 3240540
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaa 200  Q
    ||||| ||||||| ||| |||||||| |||||||| ||||||||||||||| |||| | |||| |||||||||    
T  3240611 gtaaaggatgaatctgcgaataaactcacaacatccaagttaatagcatataacggcaaaatg-ctacaaaaa 3240540  T

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Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 24186519 - 24186609
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt 219  Q
    ||||||||||||| ||| || ||||| | |||| |||||||||||| ||| ||||| | |||||||| ||| | ||||||||||||| ||||    
T  24186519 gtaaaagatgaatctgctaacaaactcataacacctaagttaatagtatacgacggcaaaatgcctataaata-atatgataaaatttaagt 24186609  T

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Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 43431956 - 43431913
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaa 198  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||    
T  43431956 acaacatccaagttaatagcatatgacggtaaaatgcttacaaa 43431913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 9637194 - 9637223
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  9637194 tttttacaaaaacaaaacgatattcattca 9637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 17426995 - 17427024
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  17426995 tttttacaaaaacaaaacgatattcattca 17427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 33110848 - 33110741
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||||||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  33110848 gtaaaggatgaatatgcaaataaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 33110749  T
Q  228 tatccatg 235  Q
    ||||||||    
T  33110748 tatccatg 33110741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 10228916 - 10228809
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || |||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10228916 gtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 10228817  T
Q  228 tatccatg 235  Q
    ||||||||    
T  10228816 tatccatg 10228809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 16419395 - 16419289
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||| || ||||| ||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  16419395 gtaaaagatgaatctgcgaacaaactcacaacaatcaagttaatagcatatgacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 16419296  T
Q  228 tatccat 234  Q
    |||||||    
T  16419295 tatccat 16419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 4088697 - 4088590
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  4088697 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatggcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 4088598  T
Q  228 tatccatg 235  Q
    ||||||||    
T  4088597 tatccatg 4088590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 4984407 - 4984514
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||||||| |||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||| |||||    
T  4984407 gtaaaggatgaatctgcgaacaaacttacatcatctaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgatcggaa 4984506  T
Q  228 tatccatg 235  Q
    ||||||||    
T  4984507 tatccatg 4984514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 8027958 - 8028065
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||    
T  8027958 gtaaaggatgaatttgcgaacaaactcacatcatcaaagttaatagcatataatggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 8028057  T
Q  228 tatccatg 235  Q
    ||||||||    
T  8028058 tatccatg 8028065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 17237126 - 17237233
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || | ||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  17237126 gtaaaggatgaatctgcgaacacactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 17237225  T
Q  228 tatccatg 235  Q
    ||||||||    
T  17237226 tatccatg 17237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 16892656 - 16892762
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||| | ||| || |||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  16892656 gtaaatgatgattctgcgaacaaacttacgacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 16892755  T
Q  228 tatccat 234  Q
    |||||||    
T  16892756 tatccat 16892762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 17334990 - 17334884
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  17334990 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaa 17334891  T
Q  228 tatccat 234  Q
    |||||||    
T  17334890 tatccat 17334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 12653175 - 12653074
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcca 233  Q
    ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  12653175 gatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcgtacaaaaatatatgataaaattaaagcgaccggaatatcca 12653076  T
Q  234 tg 235  Q
    ||    
T  12653075 tg 12653074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 12059613 - 12059720
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  12059613 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataattcctacaaaaaaatatgataaaattaaagtgaccggaa 12059712  T
Q  228 tatccatg 235  Q
    ||||||||    
T  12059713 tatccatg 12059720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 35001827 - 35001720
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||| ||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  35001827 gtaaaggattaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 35001728  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  35001727 tattcatg 35001720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 28634953 - 28635063
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| |||||||| |||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||     
T  28634953 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaatcgcatataacggcataatgcctacaaaaatacatgataaaattaaagtgaccggag 28635052  T
Q  228 tatccatgtct 238  Q
    |||||||||||    
T  28635053 tatccatgtct 28635063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 23947157 - 23947265
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa-ttaaagtgaccgga 226  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  23947157 gtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaatttaaagtgaccaga 23947256  T
Q  227 atatccatg 235  Q
    |||||||||    
T  23947257 atatccatg 23947265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 4468759 - 4468688
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4468759 aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtggccggaatatccatg 4468688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 7880973 - 7881048
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7880973 catccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatatccat 7881048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 8497205 - 8497098
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctaca-aaaatatatgataaaattaaagtgaccgga 226  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  8497205 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaaatatatgatgaaattaaagtgaccgga 8497106  T
Q  227 atatccat 234  Q
    ||||||||    
T  8497105 atatccat 8497098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 33740418 - 33740525
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||    
T  33740418 gtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcatataacggcataatgcctataaaaatatatgataaaattaaagtgaccgaaa 33740517  T
Q  228 tatccatg 235  Q
    ||||||||    
T  33740518 tatccatg 33740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 8196246 - 8196354
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||||||| || | ||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||  |||||||||||||||||||||    
T  8196246 tgtaaaggatgaatttgcgaacacactcacagcatccaagttaatagcatataacgacataatgcctacaaaaatatgcgataaaattaaagtgaccgga 8196345  T
Q  227 atatccatg 235  Q
    |||| ||||    
T  8196346 atatacatg 8196354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 25064473 - 25064367
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||| | || |    
T  25064473 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgccgggca 25064374  T
Q  228 tatccat 234  Q
    |||||||    
T  25064373 tatccat 25064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 7028060 - 7027997
Alignment:
Q  168 taatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 231  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  7028060 taatagcatataacgccataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 7027997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 7875915 - 7875990
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||| ||||||||||||||| || | |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  7875915 catccaagttaatagcatataactgcataatgcctacaaaaatatatgatgaaattaaagtgatcggaatatccat 7875990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 25337801 - 25337701
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||||||| |||  ||||||||| ||||| ||  ||||||||||||||||||||||||||||||||| ||||| |||||    
T  25337801 taaatgatgaatgtgcgaacaaacttacaccattcaagttaatatcatataacaatataatgcctacaaaaatatatgataaaattaaggtgactggaat 25337702  T
Q  229 a 229  Q
    |    
T  25337701 a 25337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 20619663 - 20619597
Alignment:
Q  169 aatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||| |||  ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  20619663 aatagcatataacgacataattcatacaaaaatatatgataaaattaaagtgaccggaatatccatg 20619597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 30608375 - 30608481
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| |||||||||||||| || || |||||||| ||||||||||||||  |||||| |||||||||||| | ||||||||||||  |||| |||| ||    
T  30608375 gtaaaggatgaatttgcaaacaatctcacaacatccaagttaatagcatacaacggtaaaatgcctacaaata-atatgataaaatataagtcaccgaaa 30608473  T
Q  228 tatccatg 235  Q
    || |||||    
T  30608474 tacccatg 30608481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 34489421 - 34489347
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtctc 239  Q
    ||||||||||||||| |||  |||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  34489421 aagttaatagcatataacgacataatggctacaaaaatata-gataaaattaaagtgaccggaatacccatatctc 34489347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 12166008 - 12165970
Alignment:
Q  196 aaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12166008 aaaaatatatgataaaattaaagtgaccggaatatccat 12165970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 1704004 - 1704098
Alignment:
Q  140 tttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||||| |||||||||||| ||  |||  | |||| ||| ||| | |||||||| |||||||||||| ||||||| ||||    
T  1704004 tttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatattcatg 1704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 4351902 - 4351952
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||||||||| ||||||| ||| | |||| |||||    
T  4351902 ataatgcctacaaaaatatatgataacattaaagcgactgaaatacccatg 4351952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 7976048 - 7976117
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 198  Q
    |||| ||||||| ||| || ||||| |||||| ||||||||||||||||  |||| | ||||||||||||    
T  7976048 taaaggatgaatatgcgaacaaactcacaacacctaagttaatagcatacaacggcaaaatgcctacaaa 7976117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 19164867 - 19164838
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  19164867 tttttacaaaaacaaaacgatattcattca 19164838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 31297122 - 31297093
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  31297122 tttttacaaaaacaaaacgatattcattca 31297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 12170770 - 12170742
Alignment:
Q  95 ttttacaaaaacaaaacgatattcattca 123  Q
    |||||||||||||||||||||||||||||    
T  12170770 ttttacaaaaacaaaacgatattcattca 12170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 29319737 - 29319821
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    ||||||| ||||| ||| || ||||| | |||| | ||||||||||||||  |||||| ||||| |||||||  |||||||||||    
T  29319737 gtaaaaggtgaatctgcgaacaaactcataacaaccaagttaatagcatacaacggtaaaatgcttacaaaataatatgataaaa 29319821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 33543485 - 33543553
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaa 217  Q
    ||||| ||||||||  ||||||||| ||||  |  ||||||| |||||||||||||| |||||||||||    
T  33543485 aaactcacaacatccgagttaatagtatatagcaatataatgtctacaaaaatatataataaaattaaa 33543553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 25274132 - 25274025
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  25274132 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 25274033  T
Q  228 tatccatg 235  Q
    ||||||||    
T  25274032 tatccatg 25274025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 10359391 - 10359495
Alignment:
Q  131 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 230  Q
    |||||||||||||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  10359391 aaagatgaatttgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaaataaagtgactggaatat 10359490  T
Q  231 ccatg 235  Q
    |||||    
T  10359491 ccatg 10359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9528717 - 9528824
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9528717 gtaaaggatgaatctgcgaacaaactcacaacattcaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9528816  T
Q  228 tatccatg 235  Q
    ||||||||    
T  9528817 tatccatg 9528824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 44947661 - 44947554
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  44947661 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacatataacggcacaatgcctacaaaaatatatgataaaattaaagtgaccggaa 44947562  T
Q  228 tatccatg 235  Q
    ||||||||    
T  44947561 tatccatg 44947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 43153875 - 43153961
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43153875 aaactcacaacatccaagttaacagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 43153961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 38706550 - 38706657
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||| ||    
T  38706550 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatataacgacataatgtctacaaaaatatatgataaaattaaagtgaccgaaa 38706649  T
Q  228 tatccatg 235  Q
    ||||||||    
T  38706650 tatccatg 38706657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 51318234 - 51318127
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  51318234 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 51318135  T
Q  228 tatccatg 235  Q
    ||||||||    
T  51318134 tatccatg 51318127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 52097764 - 52097863
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||||||| |||||||| ||||||||| ||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52097764 tgaatatgcgaataaactcacaacatccaagttaataccatataacgtcataatgcctacaaagatatatgataaaattaaagtgaccggaatatccatg 52097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 9645364 - 9645470
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  9645364 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatacctacaaaagtatatgataaaattaaagtgaccggaa 9645463  T
Q  228 tatccat 234  Q
    |||||||    
T  9645464 tatccat 9645470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 53616490 - 53616596
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||    
T  53616490 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatataatgaaattaaagtgaccggaa 53616589  T
Q  228 tatccat 234  Q
    |||||||    
T  53616590 tatccat 53616596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 4644107 - 4644000
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  4644107 gtaaaggatgaatctgcgaacaagctcacaacatccaagttaatagcatataacggcataatgcctacaataatatatgataaaattaaattgaccggaa 4644008  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  4644007 tattcatg 4644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 34024278 - 34024385
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| ||   ||||||| ||||||||||||||||||||||||| |||||||||    
T  34024278 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacaacataatgcttacaaaaatatatgataaaattaaaatgaccggaa 34024377  T
Q  228 tatccatg 235  Q
    ||||||||    
T  34024378 tatccatg 34024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 1532156 - 1532050
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| || ||||    
T  1532156 taaaggatgaatctgcgaacaagctcacaacatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgtccagaat 1532057  T
Q  229 atccatg 235  Q
    |||||||    
T  1532056 atccatg 1532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 10389615 - 10389701
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  10389615 aaactcacagcatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgatcggaatatccatg 10389701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 12265690 - 12265601
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtct 238  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  12265690 aaactcacaacatcaaagttaatagcatataacggcataatgcctaaaaaaatatatgataaaattaaagtgattggaatacccatgtct 12265601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 868376 - 868304
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctac-aaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  868376 aagttaatagcatataacggcataatgcctaccaaaaatatatgataaaattaaagtgaccggaatatccatg 868304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 6973028 - 6972952
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  6973028 catccaagttaatagcatataacggcataatacctacaaaaatatatgataaaattaaagtcaccggaatatccatg 6972952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 27593690 - 27593770
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| |||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  27593690 aaactcacaacatccaagttaatagcatataacggcataattcctacaaaaatatatgataaaattaaagtgacaggaata 27593770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 45227881 - 45227988
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||| ||||| || | |||||||| ||||||||||||||||||||||||||||||||||    
T  45227881 gtaaaggatgaatctacgaacaaactcacaacatccaagttaataacatataaccgcataatgcccacaaaaatatatgataaaattaaagtgaccggaa 45227980  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  45227981 tattcatg 45227988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 43444641 - 43444539
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||  || |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43444641 gtaaaggatgaatctgcgaacaaactcacagcattcaaattaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 43444542  T
Q  228 tat 230  Q
    |||    
T  43444541 tat 43444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 49410472 - 49410370
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| |||||||  || || ||||| ||| |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  49410472 gtaaaggatgaatcagcgaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtgacaggaa 49410373  T
Q  228 tat 230  Q
    |||    
T  49410372 tat 49410370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 50766388 - 50766458
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  50766388 aagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatatccat 50766458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 2115429 - 2115534
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||||    
T  2115429 taaaggatgaatctgcgaacaaactcacagtatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgactggaat 2115528  T
Q  229 atccat 234  Q
    ||||||    
T  2115529 atccat 2115534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 18138775 - 18138855
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  18138775 aaactcacaacatccaagttaatagcatataacggcataatgactacaaaaatatatgataaaatttaagtgatcggaata 18138855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 32952626 - 32952698
Alignment:
Q  163 taagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||| |||  |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  32952626 taagttaatagcatataacgacataatgcctacaaaaatataagataaaattaaattgaccggaatatccatg 32952698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 49125988 - 49126068
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  49125988 aaactcacaacatccaagttaatagcatataacggcataatgactacaaaaatatatgataaaatttaagtgatcggaata 49126068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 21090391 - 21090284
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||| ||||| |||  ||| ||||||||| ||||| |||  ||||||||||||||| || ||||||||||||||||||||||||    
T  21090391 gtaaaggatgaatctgcaaacaaactcacactatccaagttaataacatataacgacataatgcctacaaaagtagatgataaaattaaagtgaccggaa 21090292  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  21090291 tattcatg 21090284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 56199345 - 56199238
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||| | |||| |||||| |||||||||||||||||||||||||||| | |||||    
T  56199345 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatgtaacggcataatgtctacaaaaatatatgataaaattaaagtcatcggaa 56199246  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  56199245 tattcatg 56199238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 9284160 - 9284066
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    ||||||||||||| | | || ||||| |||||||| | | ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  9284160 gtaaaagatgaatctacgaacaaactcacaacatccatgataatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgac 9284066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 35261441 - 35261331
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||| ||||| |||||||| ||||||||||||||| |  | |||||| ||||||| |||| ||||||||||||| |||||| ||    
T  35261441 gtaaaggatgaatctgcaaacaaactcacaacatccaagttaatagcatataagtgcataatgtctacaaacatatctgataaaattaaaatgaccgaaa 35261342  T
Q  228 tatccatgtctc 239  Q
    || |||||||||    
T  35261341 ta-ccatgtctc 35261331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 47417875 - 47417805
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  47417875 aagttaataacatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaatggaatatccat 47417805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 49680765 - 49680683
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 231  Q
    ||||| |||||||  ||||||||| ||||| |||  |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  49680765 aaactcacaacattcaagttaataacatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatatc 49680683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 1931627 - 1931692
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  1931627 aagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 1931692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 20569506 - 20569398
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatat--gataaaattaaagtgaccgg 225  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| ||   |||||||||||||||||||||  ||| ||||||||||||||||    
T  20569506 gtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcatataacaacataatgcctacaaaaatatatatgatgaaattaaagtgaccgg 20569407  T
Q  226 aatatccat 234  Q
    |||||||||    
T  20569406 aatatccat 20569398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 29965827 - 29965778
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29965827 ataatgcctacaaaaatatatgatgaaattaaagtgaccggaatatccat 29965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 37188437 - 37188542
Alignment:
Q  130 aaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||||| ||| ||| || | ||| ||| |||| ||||||||||||||| | |  | ||||||||||||| |||||||||||||||||||||| ||||||    
T  37188437 aaaagataaatctgcgaacacactcacagcatccaagttaatagcatataatgacacaatgcctacaaaattatatgataaaattaaagtgacaggaata 37188536  T
Q  230 tccatg 235  Q
    ||||||    
T  37188537 tccatg 37188542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 46990971 - 46991064
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 221  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||| ||||||  |||  |||||||||||||||||||||||||||||||||||||    
T  46990971 gtaaatgatgaatctgcgaacaaactcacaacattcaagttaacagcatagaacgacataatgcctacaaaaatatatgataaaattaaagtga 46991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 3336004 - 3336104
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||| ||||| | |||||  |||||| |||||||| ||||  ||||||||||||| |||||||||||||||||| ||| |||||    
T  3336004 gtaaaggatgaatctgcaaacaaactcaaaacattcaagttattagcatataacggcgtaatgcctacaaatatatatgataaaattaaaatgatcggaa 3336103  T
Q  228 t 228  Q
    |    
T  3336104 t 3336104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 35964843 - 35964910
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||||||| ||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||||||    
T  35964843 acaacatccaagttaatagcatataacaacataattcctacaaaaatatatgataaaattaaagtgac 35964910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14183993 - 14183944
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  14183993 ataatgcctacaaaaa-atttgataaaattaaagtgaccggaatatccatg 14183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 31381578 - 31381619
Alignment:
Q  194 acaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  31381578 acaaaaatatatgataaaattaaagtgaccggagtattcatg 31381619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 7273711 - 7273743
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaa 217  Q
    |||||||||||||||||||||||||||||||||    
T  7273711 ataatgcctacaaaaatatatgataaaattaaa 7273743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 56040430 - 56040462
Alignment:
Q  91 ttgtttttacaaaaacaaaacgatattcattca 123  Q
    |||||||||||||||||||||||||||||||||    
T  56040430 ttgtttttacaaaaacaaaacgatattcattca 56040462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 40068840 - 40068746
Alignment:
Q  146 aataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtctctg 241  Q
    |||||||| |||||||  |||||||||| ||| ||| ||| |||||| | ||| | |||| | ||||||||||||| |||||||| ||||||||||    
T  40068840 aataaactcacaacattcaagttaatagtatacgacagtaaaatgccaataaata-atataacaaaattaaagtgatcggaatattcatgtctctg 40068746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 2521101 - 2521072
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  2521101 tttttacaaaaacaaaacgatattcattca 2521072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 8009275 - 8009308
Alignment:
Q  202 atatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||| |||||||||||||    
T  8009275 atatgataaaattaaagtgatcggaatatccatg 8009308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 26633458 - 26633487
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  26633458 tttttacaaaaacaaaacgatattcattca 26633487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 28834164 - 28834201
Alignment:
Q  202 atatgataaaattaaagtgaccggaatatccatgtctc 239  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  28834164 atatgataaaattaaagtgaccggaatagtcatgtctc 28834201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 56156435 - 56156464
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  56156435 tttttacaaaaacaaaacgatattcattca 56156464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 35964750 - 35964782
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaat 126  Q
    |||| ||||||||||||||||||||||||||||    
T  35964750 ttttgacaaaaacaaaacgatattcattcaaat 35964782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 47417977 - 47417945
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaat 126  Q
    ||||||||||||||||| |||||||||||||||    
T  47417977 tttttacaaaaacaaaatgatattcattcaaat 47417945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 43148967 - 43148859
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  43148967 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 43148868  T
Q  227 atatccatg 235  Q
    |||||||||    
T  43148867 atatccatg 43148859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 781621 - 781520
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcca 233  Q
    ||||||| ||| |||| ||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  781621 gatgaatctgcgaatatactcacaacatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgaccggaatatcca 781522  T
Q  234 tg 235  Q
    ||    
T  781521 tg 781520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 7247198 - 7247091
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7247198 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 7247099  T
Q  228 tatccatg 235  Q
    ||||||||    
T  7247098 tatccatg 7247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 19259673 - 19259759
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19259673 aaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 19259759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 34881955 - 34881850
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| |||||| ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  34881955 taaaggatgaatctgcaaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatataattaaagtga-cggaat 34881857  T
Q  229 atccatg 235  Q
    |||||||    
T  34881856 atccatg 34881850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 18677311 - 18677412
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcca 233  Q
    ||||||| ||| || ||||  |||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18677311 gatgaatctgcgaacaaacacacaacatccaagttaatagcatataacggcataatgcttacaaaaatatatgataaaattaaagtgaccggaatatcca 18677410  T
Q  234 tg 235  Q
    ||    
T  18677411 tg 18677412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 4954232 - 4954124
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4954232 tgtaaaggatgaatatgtgaacaaactcacaacatcaaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 4954133  T
Q  227 atatccatg 235  Q
    |||| ||||    
T  4954132 atattcatg 4954124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 27266699 - 27266806
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  27266699 gtaaatgatgaatctgcgaacaaactcacagcatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 27266798  T
Q  228 tatccatg 235  Q
    ||||||||    
T  27266799 tatccatg 27266806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 27752164 - 27752061
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| | | || | ||| ||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  27752164 gtaaaagatgaatctacgaacatactcacagcatccaagttaatagcatataatggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 27752065  T
Q  228 tatc 231  Q
    ||||    
T  27752064 tatc 27752061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 30299083 - 30298976
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || | ||| | |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  30299083 gtaaaggatgaatctgcgaacatactcagaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaa 30298984  T
Q  228 tatccatg 235  Q
    ||||||||    
T  30298983 tatccatg 30298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 7242023 - 7241915
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt-gaccgga 226  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||||    
T  7242023 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaaccgga 7241924  T
Q  227 atatccatg 235  Q
    |||||||||    
T  7241923 atatccatg 7241915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 3271242 - 3271349
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| | |||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||| |||||    
T  3271242 gtaaaggatgaatctgcgaacaaactcataacatccaagttaatagcatataacgacataatgcttacaaaaatatatgataaaattaaagtgatcggaa 3271341  T
Q  228 tatccatg 235  Q
    ||||||||    
T  3271342 tatccatg 3271349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 15571140 - 15571045
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  15571140 gatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaata 15571045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 16981524 - 16981422
Alignment:
Q  135 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaat--atatgataaaattaaagtgaccggaatatcc 232  Q
    |||||| ||| || ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  16981524 atgaatctgcgaacaaactcacaacatccaagttaatagcatataacgatataatgcctacaaaaatatatatgataaaattaaagtcaccggaatatcc 16981425  T
Q  233 atg 235  Q
    |||    
T  16981424 atg 16981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 28235827 - 28235717
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccg 224  Q
    |||||| ||||||| ||| || ||||| |||||||| |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||| ||    
T  28235827 tgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcg 28235728  T
Q  225 gaatatccatg 235  Q
     ||||||||||    
T  28235727 aaatatccatg 28235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 41184280 - 41184387
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  41184280 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgccggcaaaaatatatgataaaattaaagtgactggaa 41184379  T
Q  228 tatccatg 235  Q
    ||||||||    
T  41184380 tatccatg 41184387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 2057699 - 2057785
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||||||||||||||||  |||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2057699 aaactcacaacatctaagttaactgcatataacgacataatgcctacaaaaatatatgataaaattatagtgaccggaatatccatg 2057785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 10649856 - 10649776
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| || |||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10649856 acaacatccaatttaataccatataacggcataatgcctacaaaaacatatgataaaattaaagtgaccggaatatccatg 10649776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 21060150 - 21060230
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| ||||| |||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21060150 acaacatccaagttgatagaatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 21060230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 19280807 - 19280891
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  19280807 aaactcacaacatccaagttaatagcatataacgc-ataatgcctacaaaaatatatgataatattaaagtcaccggaatatccat 19280891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 20257536 - 20257637
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  20257536 gtaaatgatgaatctgtgaacaaactcacatcatccaagttaataacatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 20257635  T
Q  228 ta 229  Q
    ||    
T  20257636 ta 20257637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 35475205 - 35475285
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| ||||||||||||||| |||   | ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35475205 acaacatccaagttaatagcatataacgacgttatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 35475285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 42886696 - 42886616
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| |||||||  ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  42886696 aaactcacaacattcaagttaatagcatataacggcataatgcctacaaaaatatattataaaattaaattgaccggaata 42886616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 30298421 - 30298339
Alignment:
Q  155 acaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| |||||||||||||||   || | |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30298421 acaacatccaagttaatagcatatataacagcataatgcctacaaaaatatatgataaaattaaagtggccggaatatccatg 30298339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 7150196 - 7150282
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| || |||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||    
T  7150196 aaactcacagcatccaaattaatagcatataacggcataatgactacaaaaatatatgataaaattaaagtcaccgaaatatccatg 7150282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 26578455 - 26578389
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 230  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  26578455 aagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatat 26578389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 11768232 - 11768143
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgacc 223  Q
    ||||||| ||| || ||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  11768232 gatgaatctgcgaacaaactcacatcatccaagataatagcatataacggcataatggctacaaaaatatatgataaaattaaagtgacc 11768143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 7612898 - 7612986
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaa 216  Q
    ||||||||||||||||| || ||||| |||||||  || |||||||||||  |||  ||||||||||||||||||||||||||||||||    
T  7612898 gtaaaagatgaatttgcgaacaaactcacaacattcaatttaatagcatagaacgacataatgcctacaaaaatatatgataaaattaa 7612986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 7886779 - 7886885
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||  || ||||| |||  ||| ||||||||||||||| || | |||||||||||||||| ||||||||||| || |||||||||||    
T  7886779 gtaaaagatgaatctgtgaacaaactcacagtatccaagttaatagcatataacagaataatgcctacaaaaa-atatgataaaactatagtgaccggaa 7886877  T
Q  228 tatccatg 235  Q
    ||||||||    
T  7886878 tatccatg 7886885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 22978764 - 22978871
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| |||||||||| | |||| ||  ||||||||||| |||| |||||| |||||||||||| | ||||||| |||||||||| ||    
T  22978764 gtaaaggatgaatttgcgaataaacttaaatcatccaaactaatagcatataacggcataatggctacaaaaatattttataaaatgaaagtgaccgaaa 22978863  T
Q  228 tatccatg 235  Q
    || |||||    
T  22978864 tacccatg 22978871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 42580091 - 42580020
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| |||| |||||  || |||||||||||||||||||||||||||||||||||| ||||    
T  42580091 aagttaatagcatataacggcataatatctgcaaaaatatatgataaaattaaagtgaccggaatattcatg 42580020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 43261716 - 43261766
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43261716 ataatgcctacaaaaatatatgataacattaaagtgaccggaatatccatg 43261766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 41418605 - 41418673
Alignment:
Q  171 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtctc 239  Q
    |||||||| |||  |||||| | |||||||||||||||||||||||||||| |||||||||||||||||    
T  41418605 tagcatataacgacataatgtccacaaaaatatatgataaaattaaagtgagcggaatatccatgtctc 41418673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 43008155 - 43008238
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaa 211  Q
    ||||| ||| ||||||  || ||||| | |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  43008155 gtaaaggataaatttgagaacaaactcataacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaa 43008238  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 6446036 - 6446001
Alignment:
Q  203 tatgataaaattaaagtgaccggaatatccatgtct 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  6446036 tatgataaaattaaagtgaccggaatatccatgtct 6446001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 13468835 - 13468744
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 221  Q
    |||| ||||||||| | || ||||| |||| ||| |||||||||||||||||||  | |||||||||| | | ||||||||||| ||||||||    
T  13468835 taaatgatgaatttacgaacaaactcacaaaatcaaagttaatagcatatgacgacaaaatgcctacacata-atatgataaaactaaagtga 13468744  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 11976794 - 11976878
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||  |||| | |||||||||||| | |||||||||||    
T  11976794 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacataaaacgggaaaatgcctacaaata-atatgataaaa 11976878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 13422161 - 13422077
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||  |||| | |||||||||| | | ||||||||||||    
T  13422161 gtaaaggatgaatatgcgaacaaactcacaacatccaagttaatagcataaaacggaaaaatgcctacatata-atatgataaaat 13422077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 25980377 - 25980302
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    ||||| |||||| ||||| ||| || | ||||||||||||||| |||| | |||||||||||| | |||||||||||    
T  25980377 tgaatctgcaaacaaactcacatcacccaagttaatagcatataacggcaaaatgcctacaaata-atatgataaaa 25980302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 37483352 - 37483320
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaat 126  Q
    ||||||||||||||||| |||||||||||||||    
T  37483352 tttttacaaaaacaaaatgatattcattcaaat 37483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 38598017 - 38597942
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    ||||||||| || ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | |||||||||||    
T  38598017 tgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaa 38597942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 5635 - 5528
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || |||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  5635 gtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 5536  T
Q  228 tatccatg 235  Q
    ||||||||    
T  5535 tatccatg 5528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 25406124 - 25406231
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  25406124 gtaaaagatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 25406223  T
Q  228 tatccatg 235  Q
    ||||||||    
T  25406224 tatccatg 25406231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 38520375 - 38520482
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||  || ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  38520375 gtaaaggatgaatttgtgaacaaactcacaacatccaagttaatagcatataacggtataatgcctacaaaaatatacgataaaattaaagtgactggaa 38520474  T
Q  228 tatccatg 235  Q
    ||||||||    
T  38520475 tatccatg 38520482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 45425906 - 45426013
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45425906 gtaaatgatgaatctgcgaataaactcacagcatccaagttaatagcatataacggtataatgcctacaaaaatatatgataaaattaaagtgaccgaaa 45426005  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  45426006 tattcatg 45426013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 11709547 - 11709649
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  11709547 gtaaaggatgaatctgcgaacaaactcacaacatctaaattaatagcatatcacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 11709646  T
Q  228 tat 230  Q
    |||    
T  11709647 tat 11709649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 5701500 - 5701394
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  5701500 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacacaaatatatgatgaaattaaagtgaccggaa 5701401  T
Q  228 tatccat 234  Q
    |||||||    
T  5701400 tatccat 5701394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 19715735 - 19715841
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  19715735 gtaaaggatgaatctgcgaataaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 19715834  T
Q  228 tatccat 234  Q
    |||||||    
T  19715835 tatccat 19715841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 18569159 - 18569264
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||| |||||||| |||||||| || |||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  18569159 tgaatttgcgaataaactcacaacatccaaattaatagcatataacgacataatgcctacaaaagtatatgataaaattaaagtgaccggaatacccatg 18569258  T
Q  236 tctctg 241  Q
     |||||    
T  18569259 cctctg 18569264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 30818218 - 30818298
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30818218 acaacatccaagttaatagcatataacgctataatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 30818298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 50271986 - 50272082
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 230  Q
    ||||||| ||| || ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  50271986 gatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctacaaaaatatatgacaaaattaaagtgactggaatat 50272082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9687045 - 9687152
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9687045 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9687144  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  9687145 tattcatg 9687152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 40880853 - 40880960
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| |||| || ||| || ||||| |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |||    
T  40880853 gtaaatgatgcatctgcgaacaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtgaccagaa 40880952  T
Q  228 tatccatg 235  Q
    ||||||||    
T  40880953 tatccatg 40880960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 50148612 - 50148505
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| ||  |||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
T  50148612 tgtaaaggatgaatctgcgaaacaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccgga 50148513  T
Q  227 atatccat 234  Q
    ||||||||    
T  50148512 atatccat 50148505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 51872104 - 51871997
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  51872104 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 51872005  T
Q  228 tatccatg 235  Q
    ||||||||    
T  51872004 tatccatg 51871997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 7998030 - 7997928
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| |||||| ||||| ||| |||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7998030 gtaaaggatgaatctgcaaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 7997931  T
Q  228 tat 230  Q
    |||    
T  7997930 tat 7997928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 5324420 - 5324505
Alignment:
Q  150 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5324420 aactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccgaaatatccatg 5324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 50165939 - 50166046
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  50165939 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccagaa 50166038  T
Q  228 tatccatg 235  Q
    || |||||    
T  50166039 tacccatg 50166046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 51868485 - 51868592
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  51868485 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtcatcggaa 51868584  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  51868585 tattcatg 51868592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 19723554 - 19723448
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||| |||| ||    
T  19723554 gtaaaggatgaatctgcgaataaactcacagcatccaagttaataacatataacgacataatgcctacaaaaatatatgataaaattaaagtaaccgaaa 19723455  T
Q  228 tatccat 234  Q
    |||||||    
T  19723454 tatccat 19723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 28035359 - 28035273
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  28035359 aaactcacaacatcaaagttaataacatataacggcataatgcctacaaaaatttatgataaaattaaagtgaccggaatattcatg 28035273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 33291258 - 33291364
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||| ||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  33291258 gtaaatgatgaatctgctaacaaactcacagcatccaagttaacagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 33291357  T
Q  228 tatccat 234  Q
    |||||||    
T  33291358 tatccat 33291364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 7342963 - 7342856
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| ||   |||||||||| |||||||||||||||||||||||| |||||||    
T  7342963 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacatcataatgcctataaaaatatatgataaaattaaagtcaccggaa 7342864  T
Q  228 tatccatg 235  Q
    ||||||||    
T  7342863 tatccatg 7342856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 3871628 - 3871542
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||| |||||||| |||||||| ||||| ||||    
T  3871628 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgttaaaattatagtgaccgaaatatacatg 3871542  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 20266543 - 20266437
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| |||||||| |||||||| |||||||| |||||| |||| |||||| |||||||| |||||||| ||||||||||||| ||||    
T  20266543 gtaaaggatgaatctgcgaataaactcacaacatccaagttaattgcatataacggcataatgtctacaaaagtatatgatgaaattaaagtgactggaa 20266444  T
Q  228 tatccat 234  Q
     ||||||    
T  20266443 catccat 20266437  T

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Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 9172731 - 9172628
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||| ||  ||| |||||||||| |||||||||||||||||||||||| |||||||    
T  9172731 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaaatagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaa 9172632  T
Q  228 tatc 231  Q
    ||||    
T  9172631 tatc 9172628  T

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Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 9180713 - 9180610
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||| ||  ||| |||||||||| |||||||||||||||||||||||| |||||||    
T  9180713 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaaatagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaa 9180614  T
Q  228 tatc 231  Q
    ||||    
T  9180613 tatc 9180610  T

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Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 34519369 - 34519262
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||  ||| |||||||||||| || | |  ||||||| |||||||||||||||||||||||||||||||||||    
T  34519369 gtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcaaataatgacataatgcatacaaaaatatatgataaaattaaagtgaccggaa 34519270  T
Q  228 tatccatg 235  Q
    ||||||||    
T  34519269 tatccatg 34519262  T

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Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 45805669 - 45805775
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| |||  ||||| ||||||||||||||||||||||||||||| |||||||    
T  45805669 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata-catataacgacataatacctacaaaaatatatgataaaattaaagtcaccggaa 45805767  T
Q  228 tatccatg 235  Q
    ||||||||    
T  45805768 tatccatg 45805775  T

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Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 7311949 - 7312047
Alignment:
Q  131 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    |||||| ||| ||| || ||||||| || ||| |||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  7311949 aaagataaatctgcgaacaaacttataatatccaagttaatagtatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccgaaata 7312047  T

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Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 11454178 - 11454073
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccgg 225  Q
    ||||| ||||||| ||| || ||||| |||||||| |||||||||||||||   | || |||||||||||| |||||||||||||||||||||||||| |    
T  11454178 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatatataatggcataatgcctacataaatatatgataaaattaaagtgaccag 11454079  T
Q  226 aatatc 231  Q
    ||||||    
T  11454078 aatatc 11454073  T

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Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 32676975 - 32677076
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||| || ||||| ||| |||| |||||||||     | |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  32676975 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaata-----taacggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 32677069  T
Q  228 tatccat 234  Q
    |||||||    
T  32677070 tatccat 32677076  T

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Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 35584462 - 35584564
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||    ||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  35584462 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaat----tataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 35584557  T
Q  228 tatccat 234  Q
    |||||||    
T  35584558 tatccat 35584564  T

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Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 39927396 - 39927505
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||||||| || ||||||  |||| |||| |||||||||||||||||||||||||||||||||||||  |||||    
T  39927396 taaaggatgaatatgcgaacaaactcacaacatccaaattaataagatataacggcataatgcctacaaaaatatatgataaaattaaagtgattggaat 39927495  T
Q  229 atccatgtct 238  Q
    |  |||||||    
T  39927496 actcatgtct 39927505  T

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Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 40646894 - 40646809
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||| |||||||| ||| ||||||||||| |||  |||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  40646894 aaactcacaacatccaagataatagcatataacgacataatgcctacaaaaatatatgatgaaattatagtgaccagaatatccat 40646809  T

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Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 9919630 - 9919523
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||| ||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||| ||||||    
T  9919630 tgtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgc-tacaaaaatatatgatcaaattaaagtcaccgga 9919532  T
Q  227 atatccatg 235  Q
    |||| ||||    
T  9919531 atattcatg 9919523  T

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Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 14545724 - 14545657
Alignment:
Q  162 ctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  14545724 ctaagttaatagcgtataacggcataatgcctacaaaaatatatgataaaattaaaatgatcggaata 14545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 48217679 - 48217596
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataa 210  Q
    |||||| ||||||||||| || ||||| |||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||    
T  48217679 tgtaaaggatgaatttgcgaacaaactcacaacatccaagttaatagcatataacaacataatgcctacaaaaatatatgataa 48217596  T

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Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 27872978 - 27872876
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||| |||  ||||    
T  27872978 gtaaatgatgaatctgcgaacaaactcacaacattcaagttaataacatataacggcataatgcttacaaaaatatatgataaaattaaaatgattggaa 27872879  T
Q  228 tat 230  Q
    |||    
T  27872878 tat 27872876  T

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Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 33817029 - 33817115
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||| ||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  33817029 aaactcacatcatccaagttaataacatataatgacataatgcctacaaaaatatatgagaaaattaaagtgaccggaatattcatg 33817115  T

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Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 33876499 - 33876585
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||| ||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  33876499 aaactcacatcatccaagttaataacatataatgacataatgcctacaaaaatatatgagaaaattaaagtgaccggaatattcatg 33876585  T

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Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 41081544 - 41081645
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    |||||| |||||| ||  || ||||| ||||||||  |||||||| ||||| || | ||||||||||||||||||||||||||||||||| ||||| |||    
T  41081544 gtaaaacatgaatctgtgaacaaactcacaacatccgagttaataacatataactgcataatgcctacaaaaatatatgataaaattaaaatgaccagaa 41081643  T
Q  228 ta 229  Q
    ||    
T  41081644 ta 41081645  T

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Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 31130432 - 31130532
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||  || ||||| ||| |||| |||||||||| |||| |||  |||||||||||||||||| || ||||||||||||||||||||    
T  31130432 tgtaaaggatgaatatgtgaacaaactcacagcatccaagttaatagaatataacgacataatgcctacaaaaatacataataaaattaaagtgaccgga 31130531  T
Q  227 a 227  Q
    |    
T  31130532 a 31130532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 30879309 - 30879210
Alignment:
Q  135 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||| ||| || ||||| ||||||||  ||||||||| |||| ||   |||||| ||||||||||||||||| |||||||||||| ||||||||||||    
T  30879309 atgaatctgcgaacaaactcacaacatcatagttaatagtatataacaacataatgtctacaaaaatatatgatgaaattaaagtgatcggaatatccat 30879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 39987592 - 39987522
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| || | |||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  39987592 aagttaatagcatataacagcataatgcctataaaa-tatatgataaaattaaagtgaccggaatacccatg 39987522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 27914965 - 27915047
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 231  Q
    ||||| ||| |||| || |||||||||||| |||  | ||| |||||||||||||||||| ||||||||||||||||||||||    
T  27914965 aaactcacagcatccaaattaatagcatataacgacaaaatacctacaaaaatatatgatgaaattaaagtgaccggaatatc 27915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 31837076 - 31836989
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaatt 214  Q
    |||||| ||| ||| ||| || ||||| |||  ||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  31837076 tgtaaaggataaatctgcgaacaaactcacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaatt 31836989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 48365627 - 48365707
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| ||| |||| ||||||||| | ||| |||  ||||| ||||||||||||||||||||||||||||| | |||||||    
T  48365627 aaactcacagcatccaagttaataacttataacgacataattcctacaaaaatatatgataaaattaaagtaatcggaata 48365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 19061140 - 19061071
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 198  Q
    |||||||||||| ||| || ||||| |||||||| ||||||||||||||  |||| | ||||||||||||    
T  19061140 taaaagatgaatgtgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaa 19061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 47133135 - 47133051
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||| ||| ||| ||| || ||||| |||||||| ||||||||||||||| |||| | |||||||||||||| ||||||| ||||    
T  47133135 gtaaaggataaatctgcgaacaaactcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaa-atatgatgaaat 47133051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 32679007 - 32679085
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||||| ||| || ||||| |||||||| |||||||| |||||| |||| | |||||||||||||| ||||||| ||||    
T  32679007 gatgaatctgcgaacaaactcacaacatccaagttaatggcatataacggcaaaatgcctacaaaaa-atatgatgaaat 32679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 24597109 - 24597143
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaattg 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  24597109 tttttacaaaaataaaacgatattcattcaaattg 24597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 31836975 - 31836941
Alignment:
Q  200 atatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||||||| |||||||||||||||||||||||||    
T  31836975 atatatgatgaaattaaagtgaccggaatatccat 31836941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 3228577 - 3228548
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  3228577 tttttacaaaaacaaaacgatattcattca 3228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 21687683 - 21687654
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  21687683 tttttacaaaaacaaaacgatattcattca 21687654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 27456716 - 27456667
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 177  Q
    ||||||||||||||||| || ||||| |||||| | ||||||||||||||    
T  27456716 gtaaaagatgaatttgcgaacaaactcacaacacccaagttaatagcata 27456667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 37720009 - 37720093
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||||| |||||||||||| ||||| |||||| | |||||||||||||   || | | |||||||||||| | ||||||||||||    
T  37720009 gtaaaaggtgaatttgcaaacaaactcacaacacccaagttaatagcattccacagaaaaatgcctacaaata-atatgataaaat 37720093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 39888406 - 39888365
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcata 177  Q
    ||||| ||| |||||||| |||||||||||||||||||||||    
T  39888406 tgaatctgcgaataaactcacaacatctaagttaatagcata 39888365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 28053583 - 28053686
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcca 233  Q
    |||||||||||||||||||| | |||||| |||| || | ||||  ||  || |||||||||||| | |||||||||||| ||||||| | |||||  ||    
T  28053583 gatgaatttgcaaataaactcataacatccaagtaaagatcatacaacaataaaatgcctacaaata-atatgataaaatcaaagtgatcagaataatca 28053681  T
Q  234 tgtct 238  Q
    |||||    
T  28053682 tgtct 28053686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 25631365 - 25631473
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  25631365 tgtaaaggatgaatctgcgaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccgga 25631464  T
Q  227 atatccatg 235  Q
    |||||||||    
T  25631465 atatccatg 25631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 39917238 - 39917345
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  |||||||| |||||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||    
T  39917238 gtaaaggatgaatctgtgaataaactcacaacatccaagttaatagcatataaaggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 39917337  T
Q  228 tatccatg 235  Q
    ||||||||    
T  39917338 tatccatg 39917345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 49552064 - 49552171
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||||    
T  49552064 gtaaaggatgaatctgcgaacaaacttacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtcaccggaa 49552163  T
Q  228 tatccatg 235  Q
    ||||||||    
T  49552164 tatccatg 49552171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 25162670 - 25162564
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| |||||||  || || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  25162670 gtaaaggatgaatccgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 25162571  T
Q  228 tatccat 234  Q
    |||||||    
T  25162570 tatccat 25162564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 29503696 - 29503588
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || | ||| |||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  29503696 tgtaaaggatgaatatgcgaacatactcacagaatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccgga 29503597  T
Q  227 atatccatg 235  Q
    |||||||||    
T  29503596 atatccatg 29503588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 36906356 - 36906253
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  36906356 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaa 36906257  T
Q  228 tatc 231  Q
    ||||    
T  36906256 tatc 36906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 38854876 - 38854979
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  38854876 gtaaaggatgaatatgcgaaaaaactcacatcatccaagttaataacatataacggtataatgactacaaaaatatatgataaaattaaagtgcccggaa 38854975  T
Q  228 tatc 231  Q
    ||||    
T  38854976 tatc 38854979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 22803264 - 22803154
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||| ||||||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||    
T  22803264 gtaaaggataaatttgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatacatgataaaattaaagtgatcggaa 22803165  T
Q  228 tatccatgtct 238  Q
    || ||||||||    
T  22803164 tacccatgtct 22803154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 44907239 - 44907341
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| || |||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||    
T  44907239 gtaaaggatgaatctgcgaacaaactcacaacatccaaattaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 44907338  T
Q  228 tat 230  Q
    |||    
T  44907339 tat 44907341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 12116311 - 12116226
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  12116311 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgactagaatatccat 12116226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 17238018 - 17237933
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17238018 aaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatatccat 17237933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 4178768 - 4178692
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4178768 catccaagttaatagcatataacagcataatgcctagaaaaatatatgataaaattaaagtgaccggaatatccatg 4178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 3848759 - 3848862
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| |||||||    
T  3848759 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatatagcggcataatgcctacaaatatatatgataaaattaaagtcaccggaa 3848858  T
Q  228 tatc 231  Q
    ||||    
T  3848859 tatc 3848862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 32607703 - 32607601
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| | ||||||||||||| | || |||||||||||||||||||||||| |||||||||||| |||||    
T  32607703 gtaaaggatgaatctgcgaacaaactcacaacatccaggttaatagcatataatggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaa 32607604  T
Q  228 tat 230  Q
    |||    
T  32607603 tat 32607601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 46934873 - 46934769
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||| |||     ||||||||||||||||||||||||||||||||||||||||    
T  46934873 gtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcatataacg---acatgcctacaaaaatatatgataaaattaaagtgaccggaa 46934777  T
Q  228 tatccatg 235  Q
    ||||||||    
T  46934776 tatccatg 46934769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 50611289 - 50611365
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  50611289 catccaagttaatagcatataactgtataatgcctacaaaaacatatgataaaatttaagtgacccgaatatccatg 50611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 35499040 - 35499144
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || |||||||||||||| || |||||||||||| |||  |||||||  ||||||||||||||| |||||||||||| |||||    
T  35499040 gtaaaggatgaatctgcgaaaaaacttacaacatccaaattaatagcatataacgacataatgc--acaaaaatatatgatgaaattaaagtgatcggaa 35499137  T
Q  228 tatccat 234  Q
    |||||||    
T  35499138 tatccat 35499144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 42719748 - 42719649
Alignment:
Q  131 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 230  Q
    |||||||||| | | || |||||||||  ||  |||||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42719748 aaagatgaatctacgaacaaacttacagtattcaagttaatggcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 42719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 46178802 - 46178695
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||| ||  ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||||||    
T  46178802 gtaaaagataaaactgcgaacaaactcacatcatccaagttaatagcatataacgacataatgcttacaaaaatatatgataaaataaaagtgaccggaa 46178703  T
Q  228 tatccatg 235  Q
    || |||||    
T  46178702 tacccatg 46178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 30648560 - 30648666
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||| |||| |||    
T  30648560 taaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacatattgcctataaaaatatatgataaaattaaagttaccgaaat 30648659  T
Q  229 atccatg 235  Q
    || ||||    
T  30648660 attcatg 30648666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 2342640 - 2342591
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2342640 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 2342591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 14464738 - 14464638
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcca 233  Q
    ||||||| ||| || ||||| | |||||| |||||||||| |||| || | ||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  14464738 gatgaatctgcgaacaaactcagaacatccaagttaatagtatataacagcataatgcctacaaaaatatatgacaaaattaaagtgactggaacatcca 14464639  T
Q  234 t 234  Q
    |    
T  14464638 t 14464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 21488321 - 21488233
Alignment:
Q  134 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    ||||||| ||| |||||||| |||  ||  ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  21488321 gatgaatctgcgaataaactcacagtattcaagttaatagcatataagagtataatgcctacaaaaatatatgataaaattaaagtgac 21488233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 36734569 - 36734634
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  36734569 aagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtaaccgaaata 36734634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 21916708 - 21916600
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||    || |||||  ||||||||||||||||||||||||||||||||| |    
T  21916708 tgtaaaggatgaatctgagaacaaactcacatcatccaagttaatagcatacaggggcataatatctacaaaaatatatgataaaattaaagtgaccgaa 21916609  T
Q  227 atatccatg 235  Q
    |||||||||    
T  21916608 atatccatg 21916600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 25850038 - 25849932
Alignment:
Q  133 agatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatcc 232  Q
    |||||||| ||| || ||||| |||||| | |||||||||| |||| |||  ||||||| ||||||||||||  ||||| |||||||||| ||||||| |    
T  25850038 agatgaatatgcgaacaaactcacaacacccaagttaatagtatataacgacataatgcttacaaaaatatacaataaagttaaagtgactggaatattc 25849939  T
Q  233 atgtctc 239  Q
    |||||||    
T  25849938 atgtctc 25849932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 51202151 - 51202196
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 230  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  51202151 ataatgcctacaaaaatatatgataaaattaaagtgaccgggatat 51202196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 37169427 - 37169374
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaa 217  Q
    ||||||||||||||| || | |||||||||||||||||||||||| ||||||||    
T  37169427 aagttaatagcatataacagcataatgcctacaaaaatatatgatcaaattaaa 37169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 50194195 - 50194267
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaa 200  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| | ||||||||||||||    
T  50194195 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaa 50194267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 4711709 - 4711604
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| |||||| ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | ||||||||||| | |||| |||| |||    
T  4711709 taaaggatgaatctgcaaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaat 4711611  T
Q  229 atccatg 235  Q
    | |||||    
T  4711610 acccatg 4711604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 51628988 - 51629037
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 177  Q
    |||||||||||||||||||||||| | ||| ||| |||||||||||||||    
T  51628988 gtaaaagatgaatttgcaaataaattcacatcatttaagttaatagcata 51629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 38859922 - 38859954
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaat 126  Q
    |||||||||||||||||||||||||||||||||    
T  38859922 tttttacaaaaacaaaacgatattcattcaaat 38859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 44959841 - 44959939
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||||||| ||| |||| ||||||||||||||  | || | |||||||||||| | ||||||||||| | |||| |||| |||| |||||    
T  44959841 tgaatctgcaaataaactcacagcatccaagttaatagcatacaatggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaatacccatg 44959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 6903155 - 6903105
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 177  Q
    |||||| ||||||||| |||| ||||| |||| ||||||||||||||||||    
T  6903155 tgtaaaggatgaatttacaaacaaactcacaatatctaagttaatagcata 6903105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 31794272 - 31794203
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    |||| ||||||||||||||| |||   || ||||||||| | ||||||||||||||||| |||||||||||    
T  31794272 catccaagttaatagcatataacgacgta-tgcctacaacagtatatgataaaattaaactgaccggaata 31794203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 43017116 - 43017046
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 198  Q
    ||||| ||||||| ||  |||||||| |||||| ||||||||||||||||  |||| | ||||||||||||    
T  43017116 gtaaaggatgaatatgtgaataaactcacaacacctaagttaatagcatacaacggcaaaatgcctacaaa 43017046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 953332 - 953361
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  953332 tttttacaaaaacaaaacgatattcattca 953361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 19339476 - 19339447
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  19339476 tttttacaaaaacaaaacgatattcattca 19339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 23799735 - 23799764
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  23799735 tttttacaaaaacaaaacgatattcattca 23799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 27856393 - 27856309
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||||||||||| ||| || ||||| ||| |||| |||||||||||||   |||| | |||||||||||| | ||||||||||||    
T  27856393 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatgcaacggaaaaatgcctacaaata-atatgataaaat 27856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 30293348 - 30293397
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatat 178  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||||||||    
T  30293348 taaaagatgaatctgcaaataaactcatgacatccaagttaatagcatat 30293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 40487626 - 40487597
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  40487626 tttttacaaaaacaaaacgatattcattca 40487597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 46304308 - 46304337
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  46304308 tttttacaaaaacaaaacgatattcattca 46304337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 40487545 - 40487470
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    ||||||||| || ||||| |||||| | ||||||||| ||||| |||| | |||||||||||| | |||||||||||    
T  40487545 tgaatttgcgaacaaactcacaacacccaagttaataacatataacggcaaaatgcctacaaata-atatgataaaa 40487470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 32684905 - 32684798
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| | | || ||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  32684905 gtaaaggatgaatctacgaacaaacttacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccggaa 32684806  T
Q  228 tatccatg 235  Q
    ||||||||    
T  32684805 tatccatg 32684798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 17222841 - 17222947
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  17222841 taaaggatgaatctgcgaacaaactcacaacatccaagttactagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaat 17222940  T
Q  229 atccatg 235  Q
    |||||||    
T  17222941 atccatg 17222947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 22927709 - 22927817
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||||||| || ||||| ||| || | ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  22927709 tgtaaaggatgaatttgcgaacaaactcacagcaaccaagttgatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 22927808  T
Q  227 atatccatg 235  Q
    |||||||||    
T  22927809 atatccatg 22927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 42311515 - 42311410
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||| || |||||  || |||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  42311515 gtaaaggatgaatttgcgaacaaact--cagcatccaagttaatagcatataacggcataatgcgtacaaaaatatatgataaaattaaagtgaccggaa 42311418  T
Q  228 tatccatg 235  Q
    ||||||||    
T  42311417 tatccatg 42311410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 433531 - 433638
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||    
T  433531 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 433630  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  433631 tattcatg 433638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 1448697 - 1448776
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1448697 acaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcggaatatccat 1448776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 26492602 - 26492497
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||||||||| ||  || ||||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  26492602 gtaaaagatgaatctgtgaacaaactcacagcatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 26492503  T
Q  228 tatcca 233  Q
    ||||||    
T  26492502 tatcca 26492497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 13592348 - 13592456
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  13592348 tgtaaaggatgaatctgcgaacaaactcacagcatcgaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccaga 13592447  T
Q  227 atatccatg 235  Q
    ||| |||||    
T  13592448 atacccatg 13592456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 35261533 - 35261433
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||| ||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35261533 taaaggatgaatctgcgaacaaactcacaatatccaagttaatagcatacaacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaat 35261434  T
Q  229 a 229  Q
    |    
T  35261433 a 35261433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 48208138 - 48208030
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaa-tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    ||||| ||||||| ||| || | ||| |||||||| ||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  48208138 gtaaaggatgaatctgcgaaaatactcacaacatccaagttaaatagcatataacggcataatgccaacaaaaatatatgataaaattaaagtgaccgga 48208039  T
Q  227 atatccatg 235  Q
    |||||||||    
T  48208038 atatccatg 48208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 7640615 - 7640722
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||| ||||||||||||| |||||||||||||| |||    
T  7640615 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctataaaaatatatgatgaaattaaagtgaccagaa 7640714  T
Q  228 tatccatg 235  Q
    ||||||||    
T  7640715 tatccatg 7640722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 31235631 - 31235734
Alignment:
Q  135 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||||||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  31235631 atgaatttgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatacatgataaaattaaagtgatcggaatacccat 31235730  T
Q  235 gtct 238  Q
    ||||    
T  31235731 gtct 31235734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 2843081 - 2843187
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||    
T  2843081 gtaaaggatgaatatgtgaacaaactcacagcatctaagctaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 2843180  T
Q  228 tatccat 234  Q
    |||||||    
T  2843181 tatccat 2843187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 34773948 - 34773842
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||| ||| |||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  34773948 gtaaaggataaatctgcaaacaaactcacagcatccaagttaatagtatataacgatataatgcctacaaaaatatatgatgaaattaaagtgactggaa 34773849  T
Q  228 tatccat 234  Q
    |||||||    
T  34773848 tatccat 34773842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 35496036 - 35496122
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  35496036 aaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatatccatg 35496122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 46822252 - 46822150
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||    
T  46822252 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaa 46822153  T
Q  228 tat 230  Q
    |||    
T  46822152 tat 46822150  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 26583947 - 26583839
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacat-ctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    ||||| ||||||| ||| ||||| || ||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  26583947 gtaaaggatgaatctgcgaataagctcacagcattcaaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccgga 26583848  T
Q  227 atatccatg 235  Q
    |||| ||||    
T  26583847 atattcatg 26583839  T

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Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 20116818 - 20116716
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||    
T  20116818 gtaaatgatgaatctgtgaacaaactcacaacatccaagttaatagcatat-acgacataatgcctacaaaaatatttgataaaattaaagtgaccggaa 20116720  T
Q  228 tatc 231  Q
    ||||    
T  20116719 tatc 20116716  T

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Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 23085758 - 23085651
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||  ||| || |||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  23085758 gtaaaggatgaatctgcgaacaaactcacagtatccaaattaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 23085659  T
Q  228 tatccatg 235  Q
    ||||||||    
T  23085658 tatccatg 23085651  T

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Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 23786812 - 23786705
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||||||||| ||||||||| ||   ||||||| |||||||||||||||||||||||||||||| ||||    
T  23786812 gtaaatgatgaatctgcgaacaaactcacagcatctaagttgatagcatataacaacataatgcatacaaaaatatatgataaaattaaagtgacaggaa 23786713  T
Q  228 tatccatg 235  Q
    ||||||||    
T  23786712 tatccatg 23786705  T

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Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 35667072 - 35667179
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||||||  || ||||| || ||||| ||||||||| ||||| ||   ||||||| |||||||||||||||||||||||||||||||||||    
T  35667072 gtaaatgatgaatttgtgaacaaactcacgacatccaagttaatatcatataacaacataatgcatacaaaaatatatgataaaattaaagtgaccggaa 35667171  T
Q  228 tatccatg 235  Q
    ||||||||    
T  35667172 tatccatg 35667179  T

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Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 45198873 - 45198980
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || | ||| |||||||| |||||||||| |||| |||  ||||| ||||||||||||||||||||||| |||||||||||||    
T  45198873 gtaaaggatgaatctgcgaacatactcacaacatccaagttaatagtatataacgacataatacctacaaaaatatatgataaaatcaaagtgaccggaa 45198972  T
Q  228 tatccatg 235  Q
    ||||||||    
T  45198973 tatccatg 45198980  T

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Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 20083576 - 20083474
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| | |||||| ||||||||||| ||| |||  |||||||||||||||||||||||||||| |||||||||||||    
T  20083576 tgtaaatgatgaatctgcgaacaaactaataacatcaaagttaatagcgtataacgacataatgcctacaaaaatatatgataaaactaaagtgaccgga 20083477  T
Q  227 ata 229  Q
    |||    
T  20083476 ata 20083474  T

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Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 32521764 - 32521870
Alignment:
Q  123 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||| ||||| ||||||||||  || ||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||| |    
T  32521764 aaatcgtaaaggatgaatttgtgaacaaactcacaacatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaataaaagtgtc 32521863  T
Q  223 cggaata 229  Q
     ||||||    
T  32521864 tggaata 32521870  T

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Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 1485096 - 1485204
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatg-ataaaattaaagtgaccgga 226  Q
    ||||| ||||||| ||| || ||  |||||||||| ||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||    
T  1485096 gtaaaggatgaatctgcgaacaagtttacaacatccaagttaatagcatataagggcataatgcctacaaaaatatatgaaaaaaattaaagtcaccgga 1485195  T
Q  227 atatccatg 235  Q
    |||||||||    
T  1485196 atatccatg 1485204  T

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Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 19560199 - 19560128
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  19560199 aagttaatagcatataacggcataatgtgtacaaaaatatatgataaaattaaagtgaccggaatattcatg 19560128  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 21266627 - 21266520
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||| ||    
T  21266627 gtaaatgatgaatctgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtcaccgaaa 21266528  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  21266527 tattcatg 21266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 6559083 - 6559007
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||||||||| |||  ||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  6559083 catccaagttaatagcatataacgacataatgcttgcaaaaatatatgataaaattaaagtgaccggaatattcatg 6559007  T

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Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 23425244 - 23425320
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  23425244 catccaagttaataacatataacggcataatgcctacaaaaatatatgataaaagtaaagtgactagaatatccatg 23425320  T

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Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 42066929 - 42067009
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| |||||||||||| ||  |||  | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42066929 acaacatccaagttaatagcacatatcggcgttatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 42067009  T

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Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 17499548 - 17499622
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    |||||| | ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  17499548 acaacaacaaagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 17499622  T

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Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 17553666 - 17553592
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    |||||| | ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  17553666 acaacaacaaagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 17553592  T

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Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 46339291 - 46339185
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||| ||||| |||  ||||||| | |||||||||||||| ||||||||||||||||||    
T  46339291 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaataacatataacgacataatgcatgcaaaaatatatgatgaaattaaagtgaccggaa 46339192  T
Q  228 tatccat 234  Q
    |||||||    
T  46339191 tatccat 46339185  T

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Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 6002246 - 6002156
Alignment:
Q  146 aataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtct 238  Q
    |||||||| ||| |||| ||||||||||||||  | || |||||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  6002246 aataaactcacatcatccaagttaatagcata--atggcataatgcctacaaaaatacatgataaaattaaggtgaccggaatactcatgtct 6002156  T

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Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 46818279 - 46818360
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcc-tacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    ||||| |||||||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||||||||| |||||||    
T  46818279 aaactcacaacatccaagttaatagcatataacgacataatgtcgtacaaaaatatatgataaaattaaagtgaacggaata 46818360  T

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Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14627777 - 14627826
Alignment:
Q  186 taatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  14627777 taatgcctacaaaaatatatgataaaattaaagtgactggaatattcatg 14627826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 17611303 - 17611240
Alignment:
Q  171 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  17611303 tagcatatagcgatataatgcctacaaaaatatatgataaaattaaaatgaccgaaatacccat 17611240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 38799004 - 38798928
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||| ||| || ||||| |||||||| |||||||||||||| ||||| | |||||||||||| | ||||||||||||    
T  38799004 tgaatctgcgaacaaactcacaacatccaagttaatagcataagacggcaaaatgcctacaaata-atatgataaaat 38798928  T

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Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 42408527 - 42408492
Alignment:
Q  200 atatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||||||||||| |||||||||||||    
T  42408527 atatatgataaaattaaagtgatcggaatatccatg 42408492  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 46244038 - 46244069
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaa 125  Q
    ||||||||||||||||||||||||||||||||    
T  46244038 tttttacaaaaacaaaacgatattcattcaaa 46244069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 27341760 - 27341691
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt 219  Q
    ||||||| |||||| ||||||||||||||| |||| | |||||||||||| | |||| |||||||| ||||    
T  27341760 aaacttataacatcaaagttaatagcatataacggcaaaatgcctacaaata-atattataaaatttaagt 27341691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 42978910 - 42978876
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaattg 128  Q
    |||| ||||||||||||||||||||||||||||||    
T  42978910 ttttgacaaaaacaaaacgatattcattcaaattg 42978876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 42979083 - 42979049
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaattg 128  Q
    |||| ||||||||||||||||||||||||||||||    
T  42979083 ttttgacaaaaacaaaacgatattcattcaaattg 42979049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 43369614 - 43369707
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    ||||| ||| |||||| ||| ||||||||| |||  ||||||||| ||||  |||| | |||||||| ||| | |||||||||||||||||||||    
T  43369614 gtaaaggataaatttgtaaacaaacttacatcatacaagttaatatcatacaacggcaaaatgcctataaata-atatgataaaattaaagtgac 43369707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 4999805 - 4999834
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  4999805 tttttacaaaaacaaaacgatattcattca 4999834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 5348473 - 5348522
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 198  Q
    ||||| |||||||| ||||||||||||||  |||||| ||||||||||||    
T  5348473 aaactaacaacatccaagttaatagcatacaacggtaaaatgcctacaaa 5348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 12141094 - 12141123
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  12141094 tttttacaaaaacaaaacgatattcattca 12141123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 46821528 - 46821557
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  46821528 tttttacaaaaacaaaacgatattcattca 46821557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 48061726 - 48061697
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  48061726 tttttacaaaaacaaaacgatattcattca 48061697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 8806107 - 8806000
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  8806107 gtaaaggatgaatctgcgaacaatctcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaatatatgataaaattaaagtgaccggaa 8806008  T
Q  228 tatccatg 235  Q
    ||||||||    
T  8806007 tatccatg 8806000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9986182 - 9986289
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9986182 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9986281  T
Q  228 tatccatg 235  Q
    || |||||    
T  9986282 tacccatg 9986289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 27248991 - 27249097
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  27248991 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcgtacaaaaatatatgatgaaattaaagtgaccggaa 27249090  T
Q  228 tatccat 234  Q
    |||||||    
T  27249091 tatccat 27249097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 8971467 - 8971571
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  8971467 tgtaaaggatgaatatgcgaacaaactcacagcatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgaccgga 8971566  T
Q  227 atatc 231  Q
    |||||    
T  8971567 atatc 8971571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 32913486 - 32913374
Alignment:
Q  123 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||| ||||| ||||||| ||| || | ||| |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  32913486 aaatcgtaaaggatgaatctgcgaacatactcacaacatccaagttaatagcatataacggcataatgcatacaaaaatatatgataaaattaaagtgac 32913387  T
Q  223 cggaatatccatg 235  Q
    || ||||||||||    
T  32913386 cgtaatatccatg 32913374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 84021 - 84128
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  84021 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacgaaaatatatgataaaattaaagtggccggaa 84120  T
Q  228 tatccatg 235  Q
    ||||||||    
T  84121 tatccatg 84128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 4193046 - 4192975
Alignment:
Q  160 atctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 231  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4193046 atctaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatatc 4192975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 41431269 - 41431162
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||| ||| ||| |||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  41431269 gtaaaggataaatctgcgaataaactcacaacatccaagttaatagtatataacggcataatgcctacaaaaatatatgataaaattaaagtcatcggaa 41431170  T
Q  228 tatccatg 235  Q
    ||||||||    
T  41431169 tatccatg 41431162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 32678952 - 32679053
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  32678952 taaatgatgaatctgcgaacaaactcacaacatc-aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaat 32679050  T
Q  229 atc 231  Q
    |||    
T  32679051 atc 32679053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 2808334 - 2808419
Alignment:
Q  150 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2808334 aactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcggaatatccatg 2808419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 4228365 - 4228256
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgat-aaaattaaagtgaccgg 225  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||    
T  4228365 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaaattaaagtgatcgg 4228266  T
Q  226 aatatccatg 235  Q
    ||||||||||    
T  4228265 aatatccatg 4228256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 38575326 - 38575431
Alignment:
Q  129 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 228  Q
    |||| ||||||| ||| || ||||| |||||||| ||| ||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||    
T  38575326 taaaggatgaatctgcgaacaaactcacaacatccaagataatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaat 38575425  T
Q  229 atccat 234  Q
    ||||||    
T  38575426 atccat 38575431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 7015558 - 7015658
Alignment:
Q  135 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  7015558 atgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagcgacgggaatatccat 7015657  T
Q  235 g 235  Q
    |    
T  7015658 g 7015658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 27477390 - 27477286
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||||||| ||| || | ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| |    
T  27477390 tgtaaatgatgaatctgcgaacatactcacaacatccaagttaatagtatttaacggtataatgcctacaaaaatatatgataaaattaaagtgaccgaa 27477291  T
Q  227 atatc 231  Q
    |||||    
T  27477290 atatc 27477286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 34600424 - 34600348
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34600424 catccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatattcatg 34600348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 33229006 - 33229087
Alignment:
Q  154 tacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33229006 tacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaatatccatg 33229087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 21570256 - 21570355
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| ||| || ||||||||| |||  ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  21570256 tgaatctgcgaacaaacttacagcattcaagttaatagcatacaacggcataatgcctacaaaaatatatgataaaattaaagtgaacggaatattcatg 21570355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 40659772 - 40659879
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||| ||||| ||||| || || ||||||||||||||||||    
T  40659772 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatggctacagaaataaattatgaaattaaagtgaccggaa 40659871  T
Q  228 tatccatg 235  Q
    ||||||||    
T  40659872 tatccatg 40659879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 3725421 - 3725318
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| || ||| ||||||||| |||| ||  ||||||||||| ||||  |||||||||||||||||||||| ||||||||||||| |||||    
T  3725421 gtaaaggatgaatctgtaaacaaacttacatcatccaaactaatagcatataacggcgtaatgcctacaaaaatatatgaaaaaattaaagtgatcggaa 3725322  T
Q  228 tatc 231  Q
    ||||    
T  3725321 tatc 3725318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17319561 - 17319454
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| || ||||| ||||||||| ||||| |||  |||||||||| | ||||||||||||||||||||||||||||||    
T  17319561 gtaaaggatgaatctgcgaacaaactcacgacatccaagttaataacatataacgacataatgcctatacaaatatatgataaaattaaagtgaccggaa 17319462  T
Q  228 tatccatg 235  Q
    || |||||    
T  17319461 tacccatg 17319454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 27949667 - 27949560
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||  |||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  27949667 gtaaatgatgaatctccgaacaaactcacaacatccaagttaatagcatacaacgtcataatgtctataaaaatatatgataaaattaaagtgactggaa 27949568  T
Q  228 tatccatg 235  Q
    ||||||||    
T  27949567 tatccatg 27949560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 6173832 - 6173766
Alignment:
Q  169 aatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6173832 aatagcatataactgcataatgcctacaaaaatatatgataaaattaaagtcaccggaatatccatg 6173766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 45128424 - 45128338
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| || |||||||||||| ||   |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  45128424 aaactcacaacatccaaattaatagcatataacaacataatgtctacaaaaatatatgataaaattaaagtcaccggaatatccatg 45128338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 41712628 - 41712736
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 226  Q
    |||||| ||| ||| ||| || ||||| |||| || |||||||||| ||||| || | ||||| ||||||||||||||||||||||||||| ||||||||    
T  41712628 tgtaaatgataaatctgcgaacaaactcacaatatataagttaataacatataactgcataatacctacaaaaatatatgataaaattaaaatgaccgga 41712727  T
Q  227 atatccatg 235  Q
    |||| ||||    
T  41712728 atattcatg 41712736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 20046922 - 20047029
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||| | ||| |||| |||||||||  |||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  20046922 gtaaaggatgaatctgcgaacaaaatcacagcatccaagttaataagatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 20047021  T
Q  228 tatccatg 235  Q
    ||| ||||    
T  20047022 tattcatg 20047029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 25087277 - 25087171
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| ||||  |||||||||||||| |||||||||| ||||||||||| ||||    
T  25087277 gtaaaggatgaatctgggaacaaactcacatcatccaagttaatagcatataacggcttaatgcctacaaaa-tatatgataagattaaagtgactggaa 25087179  T
Q  228 tatccatg 235  Q
    ||||||||    
T  25087178 tatccatg 25087171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 36234192 - 36234143
Alignment:
Q  185 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36234192 ataatgcctacaaaaatatatgatgaaattaaagtgaccggaatatccat 36234143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 40625897 - 40626004
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||| || ||||| | |||||  ||||||||||||||| |    |||||||||||||||| |||  |||||||||||||||||||||    
T  40625897 gtaaatgatgaatctgcgaacaaactcataacattcaagttaatagcatataaaaagataatgcctacaaaaacataacataaaattaaagtgaccggaa 40625996  T
Q  228 tatccatg 235  Q
    ||||||||    
T  40625997 tatccatg 40626004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 459144 - 459209
Alignment:
Q  157 aacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||||| ||||||||||||||| | || |||||| |||||||||||||||||||||||||| ||||    
T  459144 aacatcaaagttaatagcatataatggcataatgtctacaaaaatatatgataaaattaaaatgac 459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 22421969 - 22421866
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||| ||||||| ||  || ||||| ||| |||| |||||||| |||||| |  | ||| || ||||||||||||||||||||| ||||||||||||||    
T  22421969 gtaaaggatgaatctgtgaacaaactcacagcatccaagttaattgcatataatagcatagtgtctacaaaaatatatgataaaactaaagtgaccggaa 22421870  T
Q  228 tatc 231  Q
    ||||    
T  22421869 tatc 22421866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37613997 - 37614077
Alignment:
Q  159 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatgtctc 239  Q
    |||| ||||||||| ||||| ||   ||||||| |||||||||||||||||||||||||||||  ||||||  ||||||||    
T  37613997 catccaagttaataacatataacaacataatgcatacaaaaatatatgataaaattaaagtgattggaatactcatgtctc 37614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 31580495 - 31580566
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaa 199  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||    
T  31580495 gtaaatgatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaa 31580566  T

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Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 37994528 - 37994422
Alignment:
Q  123 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||| ||||||||||||| ||| || ||||| |||||| | ||||||||||||||| || | | |||||||||||| | ||||||||||||  || | ||    
T  37994528 aaatcgtaaaagatgaatctgcgaacaaactcacaacacccaagttaatagcatataacagcaaaatgcctacaaata-atatgataaaatctaaatcac 37994430  T
Q  223 cggaatat 230  Q
    ||||||||    
T  37994429 cggaatat 37994422  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 9374450 - 9374508
Alignment:
Q  171 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 229  Q
    |||||||| |||  |||||||||||||||||| ||||||||||||||||| | ||||||    
T  9374450 tagcatataacgacataatgcctacaaaaatacatgataaaattaaagtgtctggaata 9374508  T

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Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 30399889 - 30399974
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    |||||| ||||||| ||| || |||||||||||| ||||||||||  |||| ||||| | |||||||||||| | ||||||||||||    
T  30399889 tgtaaaggatgaatctgcgaacaaacttacaacacctaagttaatgacatacgacggcaaaatgcctacaaata-atatgataaaat 30399974  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 17319621 - 17319590
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattcaaa 125  Q
    ||||||||||||||||||||||||||||||||    
T  17319621 tttttacaaaaacaaaacgatattcattcaaa 17319590  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 37876503 - 37876573
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||||| ||||| | |||||||||||| | ||||||||||||| |||| |||| |||| |||||    
T  37876503 aagttaatagcatacgacggcaaaatgcctacaaata-atatgataaaatttaagtcaccgaaatacccatg 37876573  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 3268684 - 3268749
Alignment:
Q  137 gaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaata 202  Q
    |||| |||||| ||||| ||| |||| ||||||||| ||||| | || ||||||||||||||||||    
T  3268684 gaatctgcaaacaaactcacagcatccaagttaataccatataaaggcataatgcctacaaaaata 3268749  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 4903933 - 4903962
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  4903933 tttttacaaaaacaaaacgatattcattca 4903962  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 7646717 - 7646617
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 227  Q
    ||||||| ||||| ||| || ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | ||||||||||| | |||| |||| ||    
T  7646717 gtaaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaa 7646619  T
Q  228 ta 229  Q
    ||    
T  7646618 ta 7646617  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 31193124 - 31193153
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  31193124 tttttacaaaaacaaaacgatattcattca 31193153  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 32190895 - 32190854
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcata 177  Q
    ||||| |||||||||||| ||||||| |||||||||||||||    
T  32190895 tgaatctgcaaataaactcacaacatttaagttaatagcata 32190854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 38445478 - 38445449
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  38445478 tttttacaaaaacaaaacgatattcattca 38445449  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 3269022 - 3269058
Alignment:
Q  199 aatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||  ||||||||||||||||||||||||||||    
T  3269022 aatatatagtaaaattaaagtgaccggaatatccatg 3269058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 3269581 - 3269617
Alignment:
Q  199 aatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||  ||||||||||||||||||||||||||||    
T  3269581 aatatatagtaaaattaaagtgaccggaatatccatg 3269617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 3270140 - 3270176
Alignment:
Q  199 aatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||  ||||||||||||||||||||||||||||    
T  3270140 aatatatagtaaaattaaagtgaccggaatatccatg 3270176  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 17994505 - 17994537
Alignment:
Q  91 ttgtttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||| |||||||    
T  17994505 ttgtttttacaaaaacaaaacgataatcattca 17994537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 30420911 - 30420855
Alignment:
Q  127 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacgg 183  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| ||||    
T  30420911 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgg 30420855  T

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Target: scaffold0311 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 8892 - 8821
Alignment:
Q  164 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8892 aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaatatccatg 8821  T

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Target: scaffold0146 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 16181 - 16266
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccat 234  Q
    ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16181 aaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatatccat 16266  T

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Target: scaffold0014 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 201252 - 201320
Alignment:
Q  167 ttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  201252 ttaatagcatataacggcatgatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 201320  T

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Target: scaffold0022 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 83276 - 83385
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataat--gcctacaaaaatatatgataaaattaaagtgaccgg 225  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||  |||||||||||| |||| ||||||||||||||||||    
T  83276 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatatgcctacaaaaatgtatggtaaaattaaagtgaccgg 83375  T
Q  226 aatatccatg 235  Q
    || |||||||    
T  83376 aaaatccatg 83385  T

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Target: scaffold0426 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 6521 - 6435
Alignment:
Q  149 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||| |||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||| ||||||||||||| ||| ||||    
T  6521 aaactcacaacatccaagttaatagcatataacgacataatgcatacaaaaatatatgataaaactaaagtgaccggattattcatg 6435  T

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Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 361666 - 361746
Alignment:
Q  155 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    |||||||| ||||||| | ||||| |||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  361666 acaacatccaagttaacaacatataacggcataatgcctacaaaaatatatgagaaaattaaagtgactggagtatccatg 361746  T

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Target: scaffold0445 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 1565 - 1490
Alignment:
Q  136 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 212  Q
    ||||| |||||| ||||| |||||||| ||||||||||||||  |||| | |||||||||||| | |||||||||||    
T  1565 tgaatctgcaaacaaactcacaacatccaagttaatagcataaaacggcaaaatgcctacaaata-atatgataaaa 1490  T

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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 51043 - 50899
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattc----aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataat 189  Q
    |||| ||||||||||||||| ||||||||    ||| |||||| | ||||| ||| || ||||| ||| || | ||||||||||||||  | || | |||    
T  51043 ttttgacaaaaacaaaacgacattcattcattaaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaatggcaaaat 50944  T
Q  190 gcctacaaaaatatatgataaaattaaagtgaccggaatatccatg 235  Q
    ||||||||| | ||||||||||| | |||| |||| ||||||||||    
T  50943 gcctacaaata-atatgataaaacttaagtcaccgaaatatccatg 50899  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 454094 - 454056
Alignment:
Q  184 tataatgcctacaaaaatatatgataaaattaaagtgac 222  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  454094 tataatgcttacaaaaatatataataaaattaaagtgac 454056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 38362 - 38333
Alignment:
Q  94 tttttacaaaaacaaaacgatattcattca 123  Q
    ||||||||||||||||||||||||||||||    
T  38362 tttttacaaaaacaaaacgatattcattca 38333  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 57948 - 58032
Alignment:
Q  128 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 213  Q
    ||||| ||| ||| ||| || ||||| ||| |||| ||||||||||||||| |||| | |||||||||||||| ||||||| ||||    
T  57948 gtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcatataacggcaaaatgcctacaaaaa-atatgatgaaat 58032  T

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